Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C294T11 Lonicera japonica HOM05D023306 ORTHO05D012721 3.1e-159 565.1 282 100.0
Lj1P303T22 Lonicera japonica HOM05D023306 ORTHO05D002052 2.8e-120 435.6 224 96.4
Lj1A303T25 Lonicera japonica HOM05D037926 ORTHO05D012721 1.6e-38 164.1 196 49.5
CAN.G1463.1 Capsicum annuum HOM05D002687 ORTHO05D002065 2.9e-16 90.1 167 35.9
Sopen06g030470 Solanum pennellii HOM05D002687 ORTHO05D002052 2.9e-16 90.1 165 33.9
PGSC0003DMG400005897 Solanum tuberosum HOM05D002687 ORTHO05D002052 8.4e-16 88.6 165 33.9
Solyc06g074050.3 Solanum lycopersicum HOM05D002687 ORTHO05D002052 1.1e-15 88.2 165 33.3
Solyc11g068900.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 2.5e-15 87.0 165 33.9
Sopen11g027610 Solanum pennellii HOM05D002687 ORTHO05D002052 2.5e-15 87.0 165 33.9
PGSC0003DMG400019632 Solanum tuberosum HOM05D002687 ORTHO05D002052 3.2e-15 86.7 165 34.5
Lj1A303T24 Lonicera japonica HOM05D023306 ORTHO05D012721 1.6e-14 84.3 94 50.0
TAR633G0261 Trochodendron aralioides HOM05D002687 ORTHO05D002052 2.1e-14 84.0 192 31.2
TAR633G0472 Trochodendron aralioides HOM05D002687 ORTHO05D002052 3.5e-14 83.2 164 31.7
Actinidia07275 Actinidia chinensis HOM05D002687 ORTHO05D002052 7.9e-14 82.0 164 36.0
Nitab4.5_0000380g0140 Nicotiana tabacum HOM05D002687 ORTHO05D002052 1.8e-13 80.9 167 32.9
Nitab4.5_0000893g0110 Nicotiana tabacum HOM05D002687 ORTHO05D002052 3.9e-13 79.7 165 32.1
Dinv08137 Davidia involucrata HOM05D002687 ORTHO05D002052 5.1e-13 79.3 194 33.0
Nitab4.5_0000158g0010 Nicotiana tabacum HOM05D002687 ORTHO05D002052 5.1e-13 79.3 165 32.1
CiPaw.13G131000 Carya illinoinensis HOM05D002687 ORTHO05D002052 6.7e-13 79.0 189 30.7
Nitab4.5_0000657g0070 Nicotiana tabacum HOM05D002687 ORTHO05D002052 6.7e-13 79.0 170 32.4
Rhsim13G0195600 Rhododendron simsii HOM05D002687 ORTHO05D002052 1.1e-12 78.2 194 32.0
TAR633G1301 Trochodendron aralioides HOM05D002687 ORTHO05D002052 2.5e-12 77.0 169 30.8
DCAR_010643 Daucus carota HOM05D002687 ORTHO05D002052 4.3e-12 76.3 152 30.9
Cfa009948 Carpinus fangiana HOM05D002687 ORTHO05D002052 5.7e-12 75.9 201 29.9
Hma1.2p1_0097F.1_g048090 Hydrangea macrophylla HOM05D002687 ORTHO05D002052 7.4e-12 75.5 144 31.2
CiPaw.14G096100 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.3e-11 74.7 191 29.3
Dinv17088 Davidia involucrata HOM05D002687 ORTHO05D002052 2.8e-11 73.6 165 33.3
CSS0030865 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 3.7e-11 73.2 162 30.2
CSS0032031 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 3.7e-11 73.2 162 30.2
Nn2g14281 Nelumbo nucifera HOM05D002687 ORTHO05D002052 3.7e-11 73.2 167 28.1
TAR623G1724 Trochodendron aralioides HOM05D002687 ORTHO05D002052 3.7e-11 73.2 165 32.1
TAR369G0448 Trochodendron aralioides HOM05D002687 ORTHO05D002052 6.3e-11 72.4 165 30.3
TAR636G1837 Trochodendron aralioides HOM05D002687 ORTHO05D002052 8.2e-11 72.0 175 30.3
TAR623G0011 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.4e-10 71.2 168 31.0
FAN11G1248 Fragaria x ananassa HOM05D002687 ORTHO05D002052 2.4e-10 70.5 195 27.7
FvH4_3g26690 Fragaria vesca HOM05D002687 ORTHO05D002052 3.1e-10 70.1 193 28.0
PSO339G2661 Papaver somniferum HOM05D002687 ORTHO05D002052 3.1e-10 70.1 188 25.0
Medtr2g087000 Medicago truncatula HOM05D002687 ORTHO05D002052 4.1e-10 69.7 190 27.9
AUR62023990 Chenopodium quinoa HOM05D002687 ORTHO05D002052 5.3e-10 69.3 200 29.0
Lj1C262G4 Lonicera japonica HOM05D002687 ORTHO05D002052 5.3e-10 69.3 163 30.1
Nn6g34716 Nelumbo nucifera HOM05D002687 ORTHO05D002052 5.3e-10 69.3 194 27.3
PSO384G1068 Papaver somniferum HOM05D002687 ORTHO05D002052 5.3e-10 69.3 188 26.1
Haze_23313 Corylus avellana HOM05D002687 ORTHO05D002052 1.5e-09 67.8 201 28.4
TAR636G0437 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.5e-09 67.8 192 29.2
TAR636G3204 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.5e-09 67.8 192 29.2
AUR62031792 Chenopodium quinoa HOM05D002687 ORTHO05D002052 2.0e-09 67.4 198 29.8
EL10Ac7g16313 Beta vulgaris HOM05D002687 ORTHO05D002052 2.6e-09 67.0 191 28.8
Carub.0001s0701 Capsella rubella HOM05D002687 ORTHO05D002052 2.6e-09 67.0 175 30.3
TWI79G0900 Tripterygium wilfordii HOM05D002687 ORTHO05D002052 2.6e-09 67.0 198 29.3
AUR62001543 Chenopodium quinoa HOM05D002687 ORTHO05D002052 3.4e-09 66.6 198 27.8
TAR636G0890 Trochodendron aralioides HOM05D002687 ORTHO05D002052 3.4e-09 66.6 161 29.8
CANSAT54G2775 Cannabis sativa HOM05D002687 ORTHO05D002052 4.5e-09 66.2 176 28.4
CiPaw.09G020300 Carya illinoinensis HOM05D002687 ORTHO05D002052 4.5e-09 66.2 150 31.3
Cc01_g08570 Coffea canephora HOM05D002687 ORTHO05D002052 7.6e-09 65.5 166 30.1
Dinv35090 Davidia involucrata HOM05D000957 ORTHO05D000754 7.6e-09 65.5 197 29.4
Rhsim01G0201900 Rhododendron simsii HOM05D002687 ORTHO05D002052 7.6e-09 65.5 195 27.7
Actinidia24248 Actinidia chinensis HOM05D023306 ORTHO05D012721 1.0e-08 65.1 179 31.3
ECA238G0184 Erigeron canadensis HOM05D002687 ORTHO05D002052 1.0e-08 65.1 201 29.4
Lsat_1_v5_gn_3_114060 Lactuca sativa HOM05D002687 ORTHO05D002052 1.0e-08 65.1 167 27.5
AL4G21170 Arabidopsis lyrata HOM05D002687 ORTHO05D002052 1.7e-08 64.3 191 28.3
Ah.15g100060 Amaranthus hybridus HOM05D002687 ORTHO05D002052 2.2e-08 63.9 194 29.4
FAN16G1005 Fragaria x ananassa HOM05D002687 ORTHO05D002052 2.9e-08 63.5 193 26.9
BcaC01g04930 Brassica carinata HOM05D002687 ORTHO05D002052 3.8e-08 63.2 178 26.4
C03p31980 Brassica napus HOM05D002687 ORTHO05D002052 3.8e-08 63.2 178 26.4
BolC3t15541H Brassica oleracea HOM05D002687 ORTHO05D002052 3.8e-08 63.2 178 26.4
MBI01_g04539_MAGBIO Magnolia biondii HOM05D002687 ORTHO05D002052 3.8e-08 63.2 147 30.6
Sp4g10070 Schrenkiella parvula HOM05D002687 ORTHO05D002052 3.8e-08 63.2 146 28.8
AT2G27260 Arabidopsis thaliana HOM05D002687 ORTHO05D002052 5.0e-08 62.8 173 26.6
Solyc11g068893.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 5.0e-08 62.8 149 28.2
BcaC02g10865 Brassica carinata HOM05D002687 ORTHO05D002052 8.4e-08 62.0 187 26.2
C04p24310 Brassica napus HOM05D002687 ORTHO05D002052 8.4e-08 62.0 187 26.2
BolC4t23929H Brassica oleracea HOM05D002687 ORTHO05D002052 8.4e-08 62.0 187 26.2
FAN21G1704 Fragaria x ananassa HOM05D002687 ORTHO05D002052 8.4e-08 62.0 193 26.9
Lj1P294T15 Lonicera japonica HOM05D023306 ORTHO05D012721 8.4e-08 62.0 65 53.8
Aa31LG5G8690 Aethionema arabicum HOM05D002687 ORTHO05D002052 1.4e-07 61.2 192 25.5
A03p26690 Brassica napus HOM05D002687 ORTHO05D002052 1.9e-07 60.8 178 25.8
BraA03t11881Z Brassica rapa HOM05D002687 ORTHO05D002052 1.9e-07 60.8 178 25.8
HanXRQChr12g0382031 Helianthus annuus HOM05D002687 ORTHO05D002052 1.9e-07 60.8 167 29.9
MD03G1153500 Malus domestica HOM05D002687 ORTHO05D002052 1.9e-07 60.8 190 29.5
CiPaw.10G094600 Carya illinoinensis HOM05D002687 ORTHO05D002052 3.2e-07 60.1 153 30.1
MD00G1129000 Malus domestica HOM05D002687 ORTHO05D002052 3.2e-07 60.1 190 30.0
Thhalv10002076m.g Eutrema salsugineum HOM05D002687 ORTHO05D002052 4.2e-07 59.7 184 25.5
Dinv43288 Davidia involucrata HOM05D022454 ORTHO05D015080 5.5e-07 59.3 139 30.9
BraA04t17653Z Brassica rapa HOM05D002687 ORTHO05D002052 7.2e-07 58.9 180 25.0
Prupe.7G096700 Prunus persica HOM05D010052 ORTHO05D010666 7.2e-07 58.9 173 26.6
THA.LOC104826444 Tarenaya hassleriana HOM05D002687 ORTHO05D002052 7.2e-07 58.9 187 21.9
Potri.009G019800 Populus trichocarpa HOM05D002687 ORTHO05D002052 9.3e-07 58.5 197 28.4
Eucgr.J00544 Eucalyptus grandis HOM05D002687 ORTHO05D002052 1.2e-06 58.2 200 29.0
THA.LOC104800513 Tarenaya hassleriana HOM05D002687 ORTHO05D002052 1.2e-06 58.2 178 25.3
Dinv31534 Davidia involucrata HOM05D002687 ORTHO05D002052 1.6e-06 57.8 152 29.6
RcHm_v2.0_Chr7g0211331 Rosa chinensis HOM05D010052 ORTHO05D010666 3.5e-06 56.6 162 25.9
A04p20800 Brassica napus HOM05D002687 ORTHO05D002052 4.6e-06 56.2 148 24.3
Ca_01639_v3 Cicer arietinum L. HOM05D002687 ORTHO05D002052 4.6e-06 56.2 197 24.4
FvH4_5g22901 Fragaria vesca HOM05D010052 ORTHO05D010666 4.6e-06 56.2 139 26.6
RcHm_v2.0_Chr7g0211341 Rosa chinensis HOM05D010052 ORTHO05D010666 4.6e-06 56.2 110 31.8
FAN04G3011 Fragaria x ananassa HOM05D010052 ORTHO05D010666 6.1e-06 55.8 174 23.6


User provided reference genes

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