Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C16T17 Lonicera japonica HOM05D011238 ORTHO05D004093 1.9e-80 302.4 142 100.0
Lj9P2T15 Lonicera japonica HOM05D000003 ORTHO05D000167 7.7e-18 94.4 125 35.2
Lj4C877T10 Lonicera japonica HOM05D000003 ORTHO05D000167 2.3e-17 92.8 122 36.1
Manes.12G097720 Manihot esculenta HOM05D000003 ORTHO05D000167 1.3e-12 77.0 100 31.0
Manes.12G101201 Manihot esculenta HOM05D000003 ORTHO05D000004 2.2e-12 76.3 123 28.5
Lj1P809T7 Lonicera japonica HOM05D000003 ORTHO05D000167 2.8e-12 75.9 100 38.0
Manes.18G125550 Manihot esculenta HOM05D000003 ORTHO05D000167 4.9e-12 75.1 100 32.0
Manes.10G073737 Manihot esculenta HOM05D000003 ORTHO05D000004 8.3e-12 74.3 119 28.6
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 8.3e-12 74.3 131 28.2
Manes.17G011401 Manihot esculenta HOM05D000003 ORTHO05D000167 4.5e-10 68.6 119 30.3
Lj2P248T48 Lonicera japonica HOM05D000003 ORTHO05D020832 5.9e-10 68.2 67 46.3
Lj6A31G15 Lonicera japonica HOM05D000071 ORTHO05D000029 7.8e-10 67.8 110 31.8
Lj2C969T7 Lonicera japonica HOM05D000003 ORTHO05D000004 1.3e-09 67.0 61 41.0
Medtr8g031330 Medicago truncatula HOM05D058715 ORTHO05D048961 2.3e-09 66.2 118 28.8
Lj4C842T3 Lonicera japonica HOM05D000003 ORTHO05D000167 2.9e-09 65.9 131 28.2
TPR.G26136 Trifolium pratense HOM05D000147 ORTHO05D001254 2.9e-09 65.9 128 28.9
TPR.G12197 Trifolium pratense HOM05D000147 ORTHO05D004093 3.8e-09 65.5 107 28.0
TPR.G16970 Trifolium pratense HOM05D011238 ORTHO05D004093 3.8e-09 65.5 96 30.2
TPR.G3250 Trifolium pratense HOM05D011238 ORTHO05D004093 6.6e-09 64.7 104 27.9
CANSAT54G2591 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-08 63.9 126 25.4
Manes.12G143650 Manihot esculenta HOM05D000003 ORTHO05D000167 1.5e-08 63.5 99 32.3
Medtr7g036825 Medicago truncatula HOM05D000147 ORTHO05D004093 1.5e-08 63.5 111 26.1
CANSAT80G2317 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-08 63.2 128 24.2
CANSAT56G1927 Cannabis sativa HOM05D000003 ORTHO05D000167 2.5e-08 62.8 130 31.5
CANSAT56G1970 Cannabis sativa HOM05D000003 ORTHO05D000167 3.3e-08 62.4 107 29.0
CANSAT56G2961 Cannabis sativa HOM05D000003 ORTHO05D000167 3.3e-08 62.4 122 23.0
Medtr2g102247 Medicago truncatula HOM05D000147 ORTHO05D004093 3.3e-08 62.4 97 29.9
Medtr6g453270 Medicago truncatula HOM05D000147 ORTHO05D004093 4.3e-08 62.0 121 30.6
CANSAT54G1953 Cannabis sativa HOM05D000003 ORTHO05D000167 7.3e-08 61.2 129 26.4
Manes.14G123021 Manihot esculenta HOM05D000003 ORTHO05D000167 7.3e-08 61.2 99 30.3
CANSAT35G0981 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-07 59.7 117 24.8
CANSAT64G1142 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-07 59.7 106 26.4
CANSAT80G0814 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-07 59.7 124 29.0
Lj6A646G78 Lonicera japonica HOM05D000003 ORTHO05D000167 2.1e-07 59.7 97 30.9
CANSAT80G2437 Cannabis sativa HOM05D000003 ORTHO05D000167 3.6e-07 58.9 121 30.6
CANSAT11G0329 Cannabis sativa HOM05D000003 ORTHO05D000004 6.1e-07 58.2 117 24.8
Lj9P419T24 Lonicera japonica HOM05D000003 ORTHO05D000167 8.0e-07 57.8 103 27.2
TPR.G14874 Trifolium pratense HOM05D000147 ORTHO05D004093 8.0e-07 57.8 100 30.0
CANSAT54G2929 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-06 57.4 119 30.3
Lj2P99T51 Lonicera japonica HOM05D014440 ORTHO05D000167 1.0e-06 57.4 48 41.7
CANSAT25G1903 Cannabis sativa HOM05D000003 ORTHO05D000167 1.4e-06 57.0 129 24.0
CANSAT56G0342 Cannabis sativa HOM05D000003 ORTHO05D000167 2.3e-06 56.2 136 27.2
CANSAT78G0319 Cannabis sativa HOM05D000003 ORTHO05D000167 2.3e-06 56.2 107 26.2
Manes.10G114432 Manihot esculenta HOM05D020758 ORTHO05D000167 2.3e-06 56.2 117 25.6
AT3G09510 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 3.0e-06 55.8 91 29.7
CANSAT11G2042 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-06 55.8 114 22.8
Lj2P1018T21 Lonicera japonica HOM05D000003 ORTHO05D000167 3.0e-06 55.8 65 30.8
Manes.15G187851 Manihot esculenta HOM05D020758 ORTHO05D000167 3.0e-06 55.8 119 26.1
SHI45994 Sapria himalayana HOM05D000003 ORTHO05D000004 3.0e-06 55.8 115 27.0
Lju470C9T6 Lonicera japonica HOM05D000003 ORTHO05D000167 4.0e-06 55.5 92 32.6
BcaC05g27568 Brassica carinata HOM05D000003 ORTHO05D001498 5.2e-06 55.1 101 31.7
C05p35510 Brassica napus HOM05D000003 ORTHO05D001498 5.2e-06 55.1 101 31.7
CANSAT01G2358 Cannabis sativa HOM05D000003 ORTHO05D000167 6.8e-06 54.7 104 25.0
Atru.chr9.663 Acer truncatum HOM05D000003 ORTHO05D000167 8.9e-06 54.3 135 21.5
Manes.05G188350 Manihot esculenta HOM05D000003 ORTHO05D000004 8.9e-06 54.3 99 30.3


User provided reference genes

Program Settings