Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 7.4e-53 210.3 108 100.0
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 2.5e-45 185.3 108 88.9
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 2.8e-44 181.8 104 91.3
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 3.7e-44 181.4 104 88.5
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 6.2e-44 180.6 104 90.4
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 6.2e-44 180.6 104 90.4
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 8.2e-44 180.3 113 84.1
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 8.2e-44 180.3 104 89.4
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 8.2e-44 180.3 104 89.4
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 2.4e-43 178.7 102 90.2
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 3.1e-43 178.3 108 86.1
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 5.3e-43 177.6 102 89.2
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 9.0e-43 176.8 103 84.5
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 1.5e-42 176.0 112 83.9
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.5e-42 176.0 108 86.1
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 3.4e-42 174.9 103 86.4
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 4.5e-42 174.5 101 89.1
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 4.5e-42 174.5 108 82.4
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 5.8e-42 174.1 105 84.8
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 7.6e-42 173.7 102 86.3
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 7.6e-42 173.7 102 87.3
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 1.0e-41 173.3 104 84.6
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 1.0e-41 173.3 104 85.6
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 1.0e-41 173.3 103 85.4
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 1.3e-41 172.9 102 86.3
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 1.3e-41 172.9 103 86.4
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 1.7e-41 172.6 104 83.7
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.7e-41 172.6 104 84.6
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 1.7e-41 172.6 106 84.0
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 2.2e-41 172.2 108 80.6
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 2.9e-41 171.8 101 85.1
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 3.8e-41 171.4 106 81.1
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 3.8e-41 171.4 103 85.4
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 3.8e-41 171.4 104 84.6
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 4.9e-41 171.0 100 86.0
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 4.9e-41 171.0 100 86.0
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 4.9e-41 171.0 103 83.5
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 4.9e-41 171.0 104 83.7
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 4.9e-41 171.0 104 85.6
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 6.5e-41 170.6 102 83.3
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 6.5e-41 170.6 104 82.7
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 8.4e-41 170.2 101 86.1
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 1.1e-40 169.9 104 83.7
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 1.1e-40 169.9 100 87.0
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 1.1e-40 169.9 100 86.0
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.4e-40 169.5 104 84.6
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.4e-40 169.5 103 83.5
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.4e-40 169.5 103 82.5
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 2.5e-40 168.7 107 78.5
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 2.5e-40 168.7 102 84.3
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 3.2e-40 168.3 103 83.5
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 3.2e-40 168.3 101 84.2
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 3.2e-40 168.3 101 84.2
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 4.2e-40 167.9 106 80.2
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 7.1e-40 167.2 103 80.6
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 9.3e-40 166.8 101 83.2
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 1.2e-39 166.4 102 83.3
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 1.6e-39 166.0 99 84.8
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.6e-39 166.0 99 84.8
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 2.1e-39 165.6 102 82.4
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 4.6e-39 164.5 104 80.8
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 1.3e-38 162.9 102 80.4
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 1.3e-38 162.9 102 80.4
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 3.9e-38 161.4 96 84.4
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 6.7e-38 160.6 102 77.5
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 6.7e-38 160.6 103 77.7
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 6.7e-38 160.6 104 82.7
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 1.5e-37 159.5 101 79.2
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.3e-37 158.3 105 79.0
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.3e-37 158.3 105 79.0
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 7.4e-37 157.1 98 79.6
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 1.3e-36 156.4 93 83.9
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 1.3e-36 156.4 103 77.7
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 3.7e-36 154.8 88 88.6
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 2.4e-35 152.1 95 81.1
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 2.4e-35 152.1 104 79.8
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 4.1e-35 151.4 95 78.9
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 5.3e-35 151.0 95 80.0
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 5.3e-35 151.0 95 80.0
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 5.3e-35 151.0 102 72.5
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 6.9e-35 150.6 95 80.0
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 6.9e-35 150.6 102 79.4
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 1.2e-34 149.8 95 78.9
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 1.5e-34 149.4 104 72.1
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 2.0e-34 149.1 103 71.8
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 2.6e-34 148.7 102 72.5
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 5.9e-34 147.5 96 79.2
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 5.9e-34 147.5 95 77.9
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 5.9e-34 147.5 95 77.9
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 5.9e-34 147.5 95 77.9
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 5.9e-34 147.5 95 77.9
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 5.9e-34 147.5 95 77.9
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 7.6e-34 147.1 95 77.9
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 8.5e-33 143.7 96 81.2
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 4.2e-32 141.4 134 59.7
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 1.2e-31 139.8 110 70.0
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 1.6e-31 139.4 100 70.0
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 1.4e-30 136.3 101 72.3
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 1.1e-27 126.7 87 71.3
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 2.6e-26 122.1 79 77.2
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.9e-25 118.6 71 88.7
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.9e-25 118.6 71 88.7
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 7.2e-24 114.0 142 50.0
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 1.6e-23 112.8 105 57.1
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.1e-23 112.5 69 82.6
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 3.6e-23 111.7 71 80.3
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 7.9e-23 110.5 99 55.6
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 1.5e-21 106.3 108 59.3
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 3.3e-13 78.6 102 49.0
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 3.3e-13 78.6 48 81.2
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 9.7e-13 77.0 49 75.5
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 1.4e-11 73.2 90 40.0
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 8.8e-06 53.9 26 96.2


User provided reference genes

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