Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 2.5e-105 385.6 208 100.0
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 7.5e-62 241.1 205 60.5
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 3.7e-61 238.8 205 63.9
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 1.8e-60 236.5 205 61.5
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 4.1e-60 235.3 207 61.8
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 2.8e-56 222.6 207 60.4
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 3.6e-56 222.2 205 58.5
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 6.1e-56 221.5 199 61.3
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 6.8e-55 218.0 204 57.4
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 1.2e-54 217.2 209 58.4
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 4.6e-51 205.3 223 52.0
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 6.0e-51 204.9 207 55.1
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 7.8e-51 204.5 207 56.5
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 7.8e-51 204.5 202 56.9
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 3.0e-50 202.6 207 55.6
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 1.5e-49 200.3 203 54.2
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 4.3e-49 198.7 202 56.9
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 3.6e-48 195.7 207 53.1
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 2.3e-47 193.0 207 52.2
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 2.3e-47 193.0 226 52.7
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 2.6e-46 189.5 207 51.7
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 7.5e-46 188.0 206 51.5
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 1.7e-45 186.8 202 52.5
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 2.9e-45 186.0 207 53.1
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 8.3e-45 184.5 197 55.8
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 5.4e-44 181.8 202 52.0
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 7.0e-44 181.4 201 49.3
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 2.7e-43 179.5 204 49.5
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 1.0e-42 177.6 199 51.3
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 3.0e-42 176.0 228 46.9
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 6.6e-42 174.9 213 51.6
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 1.1e-41 174.1 207 49.8
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 1.5e-41 173.7 204 49.0
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 3.3e-41 172.6 204 49.5
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 6.2e-40 168.3 207 48.8
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 6.2e-40 168.3 201 49.3
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 1.1e-39 167.5 197 49.7
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 1.8e-39 166.8 202 48.0
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 4.0e-39 165.6 205 46.8
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 2.0e-38 163.3 219 46.1
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 3.4e-38 162.5 205 46.3
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 3.4e-38 162.5 205 46.3
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 1.7e-37 160.2 201 48.8
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 3.2e-36 156.0 207 45.9
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 3.5e-35 152.5 161 53.4
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 3.9e-34 149.1 160 53.1
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 3.9e-34 149.1 200 48.0
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 5.1e-34 148.7 150 54.7
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 6.6e-34 148.3 161 52.2
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 1.1e-33 147.5 161 52.2
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.1e-33 147.5 189 46.0
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 2.5e-33 146.4 207 44.9
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 4.3e-33 145.6 161 50.3
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 9.5e-33 144.4 201 44.3
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 1.2e-32 144.1 145 57.2
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 2.1e-32 143.3 201 44.3
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 6.2e-32 141.7 207 44.0
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 3.1e-31 139.4 161 49.1
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 3.1e-31 139.4 161 49.1
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 6.8e-31 138.3 143 55.2
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 1.5e-30 137.1 144 53.5
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 2.0e-30 136.7 205 44.9
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 2.6e-30 136.3 159 47.8
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 3.4e-30 136.0 145 51.0
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.4e-30 136.0 203 45.3
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 3.2e-28 129.4 189 43.4
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 1.0e-26 124.4 111 59.5
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 3.3e-25 119.4 172 41.9
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 5.6e-25 118.6 192 38.5
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 7.3e-25 118.2 128 50.8
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 9.6e-25 117.9 136 50.0
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 2.1e-24 116.7 144 46.5
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 2.8e-24 116.3 186 39.8
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 3.1e-23 112.8 135 48.1
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 3.1e-23 112.8 201 38.3
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 3.1e-23 112.8 201 38.8
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 5.3e-23 112.1 115 53.9
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 2.6e-22 109.8 201 37.8
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 1.7e-21 107.1 134 47.0
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.4e-20 103.2 144 44.4
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 3.5e-19 99.4 102 52.9
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 3.5e-19 99.4 144 44.4
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.0e-18 97.8 166 39.8
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 2.5e-17 93.2 77 66.2
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 7.3e-17 91.7 206 33.0
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.9e-15 85.1 89 52.8
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 9.0e-15 84.7 119 42.0
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.6e-14 83.2 124 40.3
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.6e-14 83.2 130 41.5
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 7.6e-14 81.6 131 40.5
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.4e-12 77.4 83 48.2
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 5.4e-12 75.5 74 52.7
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 1.3e-10 70.9 120 34.2
Hund21366 Selenicereus undatus HOM05D007451 ORTHO05D009399 9.6e-09 64.7 210 29.0
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 1.6e-08 63.9 67 50.7
Ah.16g109120 Amaranthus hybridus HOM05D007451 ORTHO05D009399 2.1e-08 63.5 112 35.7
Gorai.010G163100 Gossypium raimondii HOM05D007451 ORTHO05D009399 2.1e-08 63.5 203 28.1
arahy.Tifrunner.gnm1.ann1.D76417 Arachis hypogaea HOM05D007451 ORTHO05D009399 1.8e-07 60.5 109 36.7
BolC4t23024H Brassica oleracea HOM05D007451 ORTHO05D009399 1.2e-06 57.8 74 41.9
MBI06_g46402_MAGBIO Magnolia biondii HOM05D000482 ORTHO05D000349 4.5e-06 55.8 94 39.4


User provided reference genes

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