Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 1.1e-107 393.3 188 100.0
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 2.1e-71 272.7 177 71.8
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 2.3e-65 252.7 177 68.4
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 2.3e-65 252.7 178 68.0
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 2.9e-65 252.3 177 67.2
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 6.5e-65 251.1 177 67.2
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.5e-64 250.0 178 65.7
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 1.5e-64 250.0 178 65.7
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 7.2e-64 247.7 178 66.3
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.2e-63 246.9 179 67.0
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 3.6e-63 245.4 177 66.7
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 3.6e-63 245.4 177 65.5
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 8.0e-63 244.2 178 64.0
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 3.0e-62 242.3 178 62.9
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 5.2e-62 241.5 180 66.7
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 2.6e-61 239.2 177 62.7
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 3.4e-61 238.8 178 64.0
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 2.2e-60 236.1 175 64.6
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 2.2e-60 236.1 182 62.6
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 2.8e-60 235.7 175 63.4
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 1.8e-59 233.0 175 64.6
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 2.4e-59 232.6 177 62.7
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 4.1e-59 231.9 183 62.8
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 4.1e-59 231.9 180 61.1
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 9.2e-59 230.7 181 63.0
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 1.2e-58 230.3 182 64.3
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 1.6e-58 229.9 177 62.7
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 5.9e-58 228.0 177 61.0
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 7.8e-58 227.6 177 62.1
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 7.8e-58 227.6 179 61.5
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 1.0e-57 227.3 178 63.5
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 2.3e-57 226.1 180 60.6
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 5.0e-57 224.9 170 60.6
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 8.6e-57 224.2 177 59.3
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 8.6e-57 224.2 177 62.1
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 7.3e-56 221.1 176 61.4
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 2.1e-55 219.5 177 61.6
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 3.6e-55 218.8 177 61.0
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 8.0e-55 217.6 177 57.6
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 1.4e-54 216.9 177 59.3
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 8.9e-54 214.2 179 58.1
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 3.7e-52 208.8 166 63.3
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 3.7e-52 208.8 196 54.1
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 6.4e-52 208.0 180 59.4
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 1.1e-51 207.2 193 54.9
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 1.4e-51 206.8 180 54.4
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 4.1e-51 205.3 179 57.5
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 9.2e-51 204.1 175 58.9
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 1.6e-50 203.4 180 59.4
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 2.7e-50 202.6 186 59.1
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 1.7e-49 199.9 180 53.3
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 3.0e-49 199.1 182 53.8
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 4.3e-48 195.3 175 58.9
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 2.8e-47 192.6 179 51.4
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 2.8e-47 192.6 179 53.6
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 4.7e-47 191.8 178 51.7
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 1.4e-46 190.3 177 53.1
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 1.8e-46 189.9 156 55.8
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 3.1e-46 189.1 177 52.5
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 4.0e-46 188.7 176 54.0
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 5.2e-46 188.3 180 52.8
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 1.2e-45 187.2 178 52.2
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 1.5e-45 186.8 177 53.1
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 2.6e-45 186.0 178 48.3
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 5.8e-45 184.9 176 51.1
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 3.7e-44 182.2 172 53.5
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 4.9e-44 181.8 180 52.8
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 8.3e-44 181.0 180 50.0
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 9.2e-43 177.6 177 48.6
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 9.2e-43 177.6 177 48.6
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 9.2e-43 177.6 177 48.6
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 2.7e-42 176.0 177 52.5
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 6.0e-42 174.9 177 48.0
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 5.0e-41 171.8 181 47.5
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 1.1e-40 170.6 177 48.0
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 1.9e-40 169.9 178 51.1
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 9.5e-40 167.5 181 49.2
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 4.0e-38 162.2 203 42.4
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 6.8e-38 161.4 121 66.1
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 1.2e-37 160.6 102 69.6
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 2.0e-37 159.8 174 46.6
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 3.4e-37 159.1 177 48.0
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 1.3e-36 157.1 181 48.6
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 4.6e-34 148.7 110 66.4
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.3e-33 147.1 145 50.3
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 3.0e-33 146.0 178 41.6
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 9.5e-32 141.0 251 38.2
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 2.0e-29 133.3 182 40.7
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 8.6e-25 117.9 179 40.8
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.1e-24 117.5 179 41.3
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 4.3e-24 115.5 189 38.1
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 2.2e-20 103.2 182 38.5
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 9.3e-19 97.8 121 46.3
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 7.8e-18 94.7 111 50.5
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 1.5e-16 90.5 137 40.1
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 3.3e-16 89.4 183 26.2
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 5.6e-16 88.6 115 41.7
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 7.3e-16 88.2 77 54.5
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 3.1e-14 82.8 247 29.6
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 2.9e-12 76.3 148 33.8
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 2.4e-06 56.6 73 39.7


User provided reference genes

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