Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C1049T3 Lonicera japonica HOM05D002952 ORTHO05D003361 4.7e-191 671.0 332 100.0
Dinv12331 Davidia involucrata HOM05D002952 ORTHO05D003361 2.5e-112 409.5 374 60.2
Rhsim04G0130200 Rhododendron simsii HOM05D002952 ORTHO05D003361 3.2e-107 392.5 385 55.3
vmacro08846 Vaccinium macrocarpon HOM05D002952 ORTHO05D003361 5.5e-107 391.7 385 55.8
CSS0009413 Camellia sinensis var. sinensis HOM05D002952 ORTHO05D003361 2.3e-105 386.3 386 56.7
QL07p037253 Quercus lobata HOM05D002952 ORTHO05D003361 9.4e-99 364.4 386 53.9
Cfa016675 Carpinus fangiana HOM05D002952 ORTHO05D003361 7.9e-98 361.3 385 53.0
CiPaw.10G016000 Carya illinoinensis HOM05D002952 ORTHO05D003361 8.8e-97 357.8 383 52.5
COL.COLO4_29595 Corchorus olitorius HOM05D002952 ORTHO05D003361 1.1e-96 357.5 380 51.3
TAR633G2330 Trochodendron aralioides HOM05D002952 ORTHO05D003361 1.7e-95 353.6 373 52.5
GSVIVG01033943001 Vitis vinifera HOM05D002952 ORTHO05D003361 1.8e-94 350.1 386 52.6
Duzib093G0565 Durio zibethinus HOM05D002952 ORTHO05D003361 3.1e-94 349.4 396 50.5
Haze_19692 Corylus avellana HOM05D002952 ORTHO05D003361 1.5e-93 347.1 348 55.5
Prupe.7G097500 Prunus persica HOM05D002952 ORTHO05D003361 1.3e-92 344.0 376 50.0
Thecc.05G101800 Theobroma cacao HOM05D002952 ORTHO05D003361 2.9e-92 342.8 372 50.8
CANSAT64G1472 Cannabis sativa HOM05D002952 ORTHO05D003361 7.2e-91 338.2 358 53.6
MD14G1036800 Malus domestica HOM05D002952 ORTHO05D003361 2.7e-90 336.3 378 50.3
Gohir.A09G135300 Gossypium hirsutum HOM05D002952 ORTHO05D003361 5.2e-89 332.0 380 48.4
Cc06_g06410 Coffea canephora HOM05D002952 ORTHO05D003361 1.1e-88 330.9 361 51.2
Gorai.006G150500 Gossypium raimondii HOM05D002952 ORTHO05D003361 1.5e-88 330.5 381 49.1
RcHm_v2.0_Chr3g0475531 Rosa chinensis HOM05D002952 ORTHO05D003361 1.5e-88 330.5 377 48.8
Actinidia07937 Actinidia chinensis HOM05D002952 ORTHO05D003361 5.7e-88 328.6 378 50.5
PGR004G2265 Punica granatum HOM05D002952 ORTHO05D003361 4.8e-87 325.5 352 50.9
Atru.chr8.1386 Acer truncatum HOM05D002952 ORTHO05D003361 1.4e-86 323.9 383 48.3
Ciclev10011126m.g Citrus clementina HOM05D002952 ORTHO05D003361 1.8e-86 323.6 357 50.1
MD12G1037800 Malus domestica HOM05D002952 ORTHO05D003361 7.0e-86 321.6 378 48.1
FAN09G1177 Fragaria x ananassa HOM05D002952 ORTHO05D003361 9.1e-86 321.2 378 47.9
FvH4_6g20080 Fragaria vesca HOM05D002952 ORTHO05D003361 3.5e-85 319.3 378 47.6
FAN05G1787 Fragaria x ananassa HOM05D002952 ORTHO05D003361 4.5e-85 318.9 378 47.4
Potri.006G204600 Populus trichocarpa HOM05D002952 ORTHO05D003361 5.9e-85 318.5 361 50.1
Phvul.007G269200 Phaseolus vulgaris HOM05D002952 ORTHO05D003361 2.2e-84 316.6 371 49.9
FAN14G0567 Fragaria x ananassa HOM05D002952 ORTHO05D003361 5.0e-84 315.5 378 47.1
Manes.08G032200 Manihot esculenta HOM05D002952 ORTHO05D003361 5.0e-84 315.5 383 47.3
FAN02G4506 Fragaria x ananassa HOM05D002952 ORTHO05D003361 2.5e-83 313.2 371 47.2
Glyma.02G198100 Glycine max HOM05D002952 ORTHO05D003361 4.2e-83 312.4 373 49.6
Ca_11716_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 7.2e-83 311.6 351 49.6
Lj5g0011168 Lotus japonicus HOM05D002952 ORTHO05D003361 1.5e-80 303.9 370 48.1
Sc02g0000570 Simmondsia chinensis HOM05D002952 ORTHO05D003361 3.3e-80 302.8 375 47.2
Medtr1g057130 Medicago truncatula HOM05D002952 ORTHO05D003361 4.4e-80 302.4 365 46.3
arahy.Tifrunner.gnm1.ann1.0X8X9Q Arachis hypogaea HOM05D002952 ORTHO05D003361 1.7e-79 300.4 368 47.0
arahy.Tifrunner.gnm1.ann1.4V0AV8 Arachis hypogaea HOM05D002952 ORTHO05D003361 1.7e-79 300.4 368 47.0
PSO384G1939 Papaver somniferum HOM05D002952 ORTHO05D003361 1.7e-79 300.4 380 43.9
TPR.G31863 Trifolium pratense HOM05D002952 ORTHO05D003361 3.7e-79 299.3 370 46.8
Psat6g084840 Pisum sativum HOM05D002952 ORTHO05D003361 5.9e-77 292.0 374 46.5
Nn6g34739 Nelumbo nucifera HOM05D002952 ORTHO05D003361 3.8e-76 289.3 374 43.6
Sabra06G0157600 Salix brachista HOM05D002952 ORTHO05D003361 1.1e-75 287.7 432 41.7
Eucgr.A02600 Eucalyptus grandis HOM05D002952 ORTHO05D003361 1.5e-75 287.3 353 49.0
Gohir.D09G131900 Gossypium hirsutum HOM05D002952 ORTHO05D003361 5.6e-59 232.3 288 46.5
Glyma.10G078851 Glycine max HOM05D002952 ORTHO05D003361 9.8e-56 221.5 219 56.6
Cpa.g.sc104.51 Carica papaya HOM05D002952 ORTHO05D003361 8.0e-50 201.8 169 58.6
EL10Ac7g16807 Beta vulgaris HOM05D002952 ORTHO05D003361 5.2e-49 199.1 373 37.0
VMungo0720G0970 Vigna mungo HOM05D002952 ORTHO05D003361 7.5e-48 195.3 153 62.7
ATR0772G085 Amborella trichopoda HOM05D002952 ORTHO05D003361 1.0e-44 184.9 338 35.2
SEGI_03548 Sequoiadendron giganteum HOM05D002952 ORTHO05D003361 4.9e-39 166.0 322 33.5
CDE02G4171 Ceratophyllum demersum HOM05D002952 ORTHO05D003361 1.7e-36 157.5 311 34.4
Mapoly0006s0005 Marchantia polymorpha HOM05D002952 ORTHO05D003361 1.7e-36 157.5 324 32.4
THA.LOC104803958 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 3.0e-36 156.8 317 32.5
THA.LOC104804525 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 3.0e-36 156.8 317 32.5
THA.LOC104804523 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 3.9e-36 156.4 315 32.7
THA.LOC104804524 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 3.9e-36 156.4 315 32.7
PGR142G2741 Punica granatum HOM05D002952 ORTHO05D003361 1.1e-35 154.8 336 32.1
PSO063G0242 Papaver somniferum HOM05D002952 ORTHO05D003361 2.1e-34 150.6 324 31.2
Phvul.003G140400 Phaseolus vulgaris HOM05D002952 ORTHO05D003361 3.6e-34 149.8 316 30.7
PSO170G2574 Papaver somniferum HOM05D002952 ORTHO05D003361 6.2e-34 149.1 324 31.2
CANSAT01G1287 Cannabis sativa HOM05D002952 ORTHO05D003361 1.4e-33 147.9 316 31.6
Cpa.g.sc115.66 Carica papaya HOM05D002952 ORTHO05D003361 2.4e-33 147.1 334 31.7
VMungo1215G0843 Vigna mungo HOM05D002952 ORTHO05D003361 2.4e-33 147.1 343 29.4
Gorai.013G242600 Gossypium raimondii HOM05D002952 ORTHO05D003361 5.2e-33 146.0 337 30.9
CsaV3_2G008810 Cucumis sativus L. HOM05D002952 ORTHO05D003361 6.8e-33 145.6 339 30.1
THA.LOC104814647 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 6.8e-33 145.6 322 30.7
HPP92_015379 Vanilla planifolia HOM05D002952 ORTHO05D003361 8.9e-33 145.2 323 32.2
arahy.Tifrunner.gnm1.ann1.32QIWM Arachis hypogaea HOM05D002952 ORTHO05D003361 1.2e-32 144.8 338 29.3
arahy.Tifrunner.gnm1.ann1.MZE1GT Arachis hypogaea HOM05D002952 ORTHO05D003361 1.5e-32 144.4 338 30.2
Pp3c5_16960 Physcomitrium patens HOM05D002952 ORTHO05D003361 1.5e-32 144.4 331 28.7
CiPaw.07G198300 Carya illinoinensis HOM05D002952 ORTHO05D003361 2.0e-32 144.1 328 31.7
Thecc.09G188100 Theobroma cacao HOM05D002952 ORTHO05D003361 2.6e-32 143.7 342 32.7
A07p01440 Brassica napus HOM05D002952 ORTHO05D003361 3.4e-32 143.3 346 30.9
Gohir.A13G207800 Gossypium hirsutum HOM05D002952 ORTHO05D003361 3.4e-32 143.3 323 31.3
TPR.G31045 Trifolium pratense HOM05D002952 ORTHO05D003361 3.4e-32 143.3 328 32.0
C07p02900 Brassica napus HOM05D002952 ORTHO05D003361 4.4e-32 142.9 342 31.6
Lj6g0025977 Lotus japonicus HOM05D002952 ORTHO05D003361 4.4e-32 142.9 359 31.2
Ciclev10007425m.g Citrus clementina HOM05D002952 ORTHO05D003361 5.8e-32 142.5 338 31.1
Glyma.15G167100 Glycine max HOM05D002952 ORTHO05D003361 5.8e-32 142.5 363 30.9
RcHm_v2.0_Chr4g0399151 Rosa chinensis HOM05D002952 ORTHO05D003361 5.8e-32 142.5 337 30.0
BcaB08g34852 Brassica carinata HOM05D002952 ORTHO05D003361 7.6e-32 142.1 325 30.8
BcaC06g36561 Brassica carinata HOM05D002952 ORTHO05D003361 7.6e-32 142.1 342 31.3
ClCG11G011660 Citrullus lanatus HOM05D002952 ORTHO05D003361 7.6e-32 142.1 339 30.4
MELO3C003959.2 Cucumis melo HOM05D002952 ORTHO05D003361 9.9e-32 141.7 347 30.0
Sed0020294 Sechium edule HOM05D002952 ORTHO05D003361 9.9e-32 141.7 338 29.6
ATR0580G026 Amborella trichopoda HOM05D002952 ORTHO05D003361 1.3e-31 141.4 317 30.6
Duzib150G0495 Durio zibethinus HOM05D002952 ORTHO05D003361 1.3e-31 141.4 336 31.0
Prupe.1G073600 Prunus persica HOM05D002952 ORTHO05D003361 1.3e-31 141.4 337 30.6
Ca_21260_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 2.2e-31 140.6 318 29.9
Dinv25450 Davidia involucrata HOM05D002952 ORTHO05D003361 2.2e-31 140.6 355 30.4
FAN22G0487 Fragaria x ananassa HOM05D002952 ORTHO05D003361 2.2e-31 140.6 337 30.0
BcaB03g16719 Brassica carinata HOM05D002952 ORTHO05D003361 2.9e-31 140.2 323 32.2
CBR_g9125 Chara braunii HOM05D002952 ORTHO05D003361 3.8e-31 139.8 323 29.7
FvH4_4g07030 Fragaria vesca HOM05D002952 ORTHO05D003361 3.8e-31 139.8 337 29.7
TPR.G5387 Trifolium pratense HOM05D002952 ORTHO05D003361 3.8e-31 139.8 341 29.6
FAN12G2043 Fragaria x ananassa HOM05D002952 ORTHO05D003361 4.9e-31 139.4 337 29.7
Oeu064560.1 Olea europaea HOM05D002952 ORTHO05D003361 4.9e-31 139.4 355 30.7
Sc14g0003040 Simmondsia chinensis HOM05D002952 ORTHO05D003361 4.9e-31 139.4 342 28.4
FAN17G1204 Fragaria x ananassa HOM05D002952 ORTHO05D003361 6.4e-31 139.0 339 29.5
Manes.06G018200 Manihot esculenta HOM05D002952 ORTHO05D003361 6.4e-31 139.0 352 31.8
Potri.006G073600 Populus trichocarpa HOM05D002952 ORTHO05D003361 6.4e-31 139.0 318 30.5
Aqoxy7G02883 Aquilegia oxysepala HOM05D002952 ORTHO05D003361 8.4e-31 138.7 337 31.5
MSTRG.5937 Avicennia marina HOM05D002952 ORTHO05D003361 1.1e-30 138.3 362 29.6
FAN07G2391 Fragaria x ananassa HOM05D002952 ORTHO05D003361 1.4e-30 137.9 337 28.8
Medtr4g127210 Medicago truncatula HOM05D002952 ORTHO05D003361 1.4e-30 137.9 322 28.9
Sp3g32670 Schrenkiella parvula HOM05D002952 ORTHO05D003361 1.4e-30 137.9 320 30.3
Thhalv10022546m.g Eutrema salsugineum HOM05D002952 ORTHO05D003361 1.9e-30 137.5 321 31.2
unitig_26.g9160 Utricularia gibba HOM05D002952 ORTHO05D003361 1.9e-30 137.5 349 30.4
AUR62027417 Chenopodium quinoa HOM05D002952 ORTHO05D003361 2.4e-30 137.1 345 30.1
Os04g0298600 Oryza sativa ssp. japonica HOM05D002952 ORTHO05D003361 2.4e-30 137.1 334 31.1
VMungo1309G2675 Vigna mungo HOM05D002952 ORTHO05D003361 3.2e-30 136.7 350 31.1
Zm00001eb420400 Zea mays HOM05D002952 ORTHO05D003361 7.1e-30 135.6 315 32.4
Atru.chr7.937 Acer truncatum HOM05D002952 ORTHO05D003361 1.2e-29 134.8 319 30.4
AUR62031276 Chenopodium quinoa HOM05D002952 ORTHO05D003361 1.2e-29 134.8 320 31.9
Lalb_Chr07g0180711 Lupinus albus HOM05D002952 ORTHO05D003361 1.6e-29 134.4 319 30.1
Gohir.D13G212300 Gossypium hirsutum HOM05D002952 ORTHO05D003361 2.1e-29 134.0 302 31.8
Medtr2g038210 Medicago truncatula HOM05D002952 ORTHO05D003361 2.1e-29 134.0 334 31.4
COL.COLO4_23445 Corchorus olitorius HOM05D002952 ORTHO05D003361 3.5e-29 133.3 272 33.8
Lj4g0023754 Lotus japonicus HOM05D002952 ORTHO05D003361 3.5e-29 133.3 336 29.5
A07p16350 Brassica napus HOM05D002952 ORTHO05D003361 4.6e-29 132.9 324 30.6
Lalb_Chr13g0299881 Lupinus albus HOM05D002952 ORTHO05D003361 4.6e-29 132.9 319 30.1
Psat1g143480 Pisum sativum HOM05D002952 ORTHO05D003361 4.6e-29 132.9 356 30.9
SMO356G0480 Selaginella moellendorffii HOM05D002952 ORTHO05D003361 4.6e-29 132.9 312 31.4
GSVIVG01029303001 Vitis vinifera HOM05D002952 ORTHO05D003361 4.6e-29 132.9 347 29.1
Psat4g013440 Pisum sativum HOM05D002952 ORTHO05D003361 1.0e-28 131.7 320 29.4
Sabra06G0054900 Salix brachista HOM05D002952 ORTHO05D003361 1.0e-28 131.7 318 29.6
Ca_02121_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 1.3e-28 131.3 328 30.5
CSS0013758 Camellia sinensis var. sinensis HOM05D002952 ORTHO05D003361 1.7e-28 131.0 357 28.9
MD13G1240300 Malus domestica HOM05D002952 ORTHO05D003361 2.3e-28 130.6 319 30.1
Eucgr.C00100 Eucalyptus grandis HOM05D002952 ORTHO05D003361 3.0e-28 130.2 316 29.4
Sopen07g007020 Solanum pennellii HOM05D002952 ORTHO05D003361 3.0e-28 130.2 346 28.6
BcaB03g14394 Brassica carinata HOM05D002952 ORTHO05D003361 5.1e-28 129.4 316 30.4
Dinv41190 Davidia involucrata HOM05D002952 ORTHO05D003361 5.1e-28 129.4 344 30.8
Migut.J00788 Erythranthe guttata HOM05D002952 ORTHO05D003361 5.1e-28 129.4 322 28.6
Potri.018G140800 Populus trichocarpa HOM05D002952 ORTHO05D003361 5.1e-28 129.4 318 29.9
Actinidia38497 Actinidia chinensis HOM05D002952 ORTHO05D003361 6.6e-28 129.0 355 29.3
Cfa013462 Carpinus fangiana HOM05D002952 ORTHO05D003361 6.6e-28 129.0 284 32.0
AL5G18050 Arabidopsis lyrata HOM05D002952 ORTHO05D003361 1.5e-27 127.9 316 30.4
EL10Ac8g19298 Beta vulgaris HOM05D002952 ORTHO05D003361 1.5e-27 127.9 323 29.1
DCAR_014676 Daucus carota HOM05D002952 ORTHO05D003361 1.5e-27 127.9 358 28.2
CAN.G32.3 Capsicum annuum HOM05D002952 ORTHO05D003361 1.9e-27 127.5 338 28.1
AT3G28430 Arabidopsis thaliana HOM05D002952 ORTHO05D003361 2.5e-27 127.1 316 29.4
Aa31LG8G16340 Aethionema arabicum HOM05D002952 ORTHO05D003361 3.3e-27 126.7 325 27.7
Haze_22041 Corylus avellana HOM05D002952 ORTHO05D003361 3.3e-27 126.7 297 32.3
Pp3c16_8730 Physcomitrium patens HOM05D002952 ORTHO05D003361 4.3e-27 126.3 322 27.6
Peaxi162Scf00231g00918 Petunia axillaris HOM05D002952 ORTHO05D003361 5.6e-27 125.9 326 28.2
BraA07t29362Z Brassica rapa HOM05D002952 ORTHO05D003361 9.6e-27 125.2 339 29.5
MBI14_g10721_MAGBIO Magnolia biondii HOM05D002952 ORTHO05D003361 9.6e-27 125.2 328 30.5
BolC7t42928H Brassica oleracea HOM05D002952 ORTHO05D003361 1.6e-26 124.4 337 29.4
CARHR292530 Cardamine hirsuta HOM05D002952 ORTHO05D003361 1.6e-26 124.4 343 28.6
Cc06_g17430 Coffea canephora HOM05D002952 ORTHO05D003361 3.6e-26 123.2 345 27.2
Lju170C21T3 Lonicera japonica HOM05D002952 ORTHO05D003361 3.6e-26 123.2 350 28.0
C07p24030 Brassica napus HOM05D002952 ORTHO05D003361 4.7e-26 122.9 337 29.1
Rhsim03G0267600 Rhododendron simsii HOM05D002952 ORTHO05D003361 6.2e-26 122.5 359 28.1
vmacro05990 Vaccinium macrocarpon HOM05D002952 ORTHO05D003361 1.1e-25 121.7 371 28.0
Sabra18G0115000 Salix brachista HOM05D002952 ORTHO05D003361 2.4e-25 120.6 339 30.1
HanXRQChr03g0065441 Helianthus annuus HOM05D002952 ORTHO05D003361 6.9e-25 119.0 317 30.0
Lsat_1_v5_gn_7_55800 Lactuca sativa HOM05D002952 ORTHO05D003361 9.0e-25 118.6 327 27.8
Nitab4.5_0001245g0040 Nicotiana tabacum HOM05D002952 ORTHO05D003361 9.0e-25 118.6 346 27.2
BraA07t27938Z Brassica rapa HOM05D002952 ORTHO05D003361 1.2e-24 118.2 329 30.4
Ah.09g229430 Amaranthus hybridus HOM05D002952 ORTHO05D003361 2.0e-24 117.5 299 30.8
ECA240G1792 Erigeron canadensis HOM05D002952 ORTHO05D003361 6.4e-23 112.5 327 27.8
MBI16_g46830_MAGBIO Magnolia biondii HOM05D002952 ORTHO05D003361 1.1e-22 111.7 139 42.4
Hund12689 Selenicereus undatus HOM05D002952 ORTHO05D003361 1.1e-22 111.7 350 26.3
HanXRQChr09g0245381 Helianthus annuus HOM05D002952 ORTHO05D003361 1.9e-22 110.9 331 27.2
Hma1.2p1_0235F.1_g098720 Hydrangea macrophylla HOM05D002952 ORTHO05D003361 3.2e-22 110.2 161 41.0
Solyc07g018090.4 Solanum lycopersicum HOM05D002952 ORTHO05D003361 4.2e-22 109.8 244 31.6
Actinidia06176 Actinidia chinensis HOM05D002952 ORTHO05D003361 1.3e-20 104.8 94 57.4
QL02p047151 Quercus lobata HOM05D002952 ORTHO05D003361 5.1e-20 102.8 143 40.6
SGA_v2.0_scaffold112G31613 Striga asiatica HOM05D002952 ORTHO05D003361 8.7e-20 102.1 166 34.3
Carub.0005s0694 Capsella rubella HOM05D002952 ORTHO05D003361 1.4e-17 94.7 146 37.0
AagrBONN_evm.TU.Sc2ySwM_362.2680 Anthoceros agrestis HOM05D002952 ORTHO05D003361 2.4e-17 94.0 239 27.6
CDE05G2761 Ceratophyllum demersum HOM05D002952 ORTHO05D003361 2.0e-16 90.9 248 27.8
Hund03837 Selenicereus undatus HOM05D002952 ORTHO05D003361 2.9e-15 87.0 77 51.9
SEGI_10738 Sequoiadendron giganteum HOM05D002952 ORTHO05D003361 2.9e-15 87.0 189 34.9
Glyma.09G060600 Glycine max HOM05D002952 ORTHO05D003361 3.8e-15 86.7 267 27.0
Nn8g40677 Nelumbo nucifera HOM05D002952 ORTHO05D003361 8.4e-15 85.5 233 27.5
Actinidia25392 Actinidia chinensis HOM05D002952 ORTHO05D003361 9.3e-14 82.0 269 25.7
Actinidia29954 Actinidia chinensis HOM05D002952 ORTHO05D003361 1.6e-10 71.2 145 31.7
PRCOL_00003380 Prasinoderma coloniale HOM05D002952 ORTHO05D003361 6.2e-10 69.3 156 29.5
Cre12.g515250 Chlamydomonas reinhardtii HOM05D002952 ORTHO05D003361 3.4e-08 63.5 168 28.6


User provided reference genes

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