Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 3.7e-180 634.8 332 100.0
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 2.6e-141 505.8 351 77.2
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 1.9e-139 499.6 352 75.3
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 7.1e-139 497.7 354 76.6
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 1.0e-137 493.8 350 76.6
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 1.0e-137 493.8 347 76.9
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 1.3e-137 493.4 354 75.1
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 6.6e-137 491.1 347 76.7
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 6.6e-137 491.1 347 74.9
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 6.6e-137 491.1 349 76.5
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 8.7e-137 490.7 349 76.8
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 8.7e-137 490.7 347 74.9
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 1.1e-136 490.3 349 76.8
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 1.5e-136 490.0 344 76.5
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 1.6e-135 486.5 348 74.7
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 2.8e-135 485.7 349 76.2
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 4.8e-135 485.0 349 76.2
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 6.2e-135 484.6 349 74.8
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 6.2e-135 484.6 348 74.4
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 6.2e-135 484.6 352 73.9
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 1.1e-134 483.8 351 74.4
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 1.4e-134 483.4 343 75.2
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 1.4e-134 483.4 354 74.0
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 2.4e-134 482.6 347 74.1
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 5.3e-134 481.5 353 75.1
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 1.2e-133 480.3 349 74.5
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 3.4e-133 478.8 348 75.6
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 7.6e-133 477.6 353 73.1
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 7.6e-133 477.6 351 74.6
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 7.6e-133 477.6 354 73.2
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 9.9e-133 477.2 346 74.3
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 1.7e-132 476.5 343 74.9
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 2.2e-132 476.1 343 74.6
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 3.8e-132 475.3 352 73.0
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 3.8e-132 475.3 359 72.7
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 3.8e-132 475.3 355 72.7
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 4.9e-132 474.9 354 73.2
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 4.9e-132 474.9 358 72.6
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 4.9e-132 474.9 344 75.3
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 6.4e-132 474.6 353 72.8
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 1.1e-131 473.8 345 73.9
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 1.4e-131 473.4 353 73.4
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 2.4e-131 472.6 353 73.1
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 2.4e-131 472.6 353 73.1
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 2.4e-131 472.6 353 73.1
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 5.4e-131 471.5 352 72.2
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 1.2e-130 470.3 353 72.8
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 1.2e-130 470.3 353 72.8
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 1.6e-130 469.9 340 75.9
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 3.5e-130 468.8 349 72.8
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 3.5e-130 468.8 343 74.1
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 6.0e-130 468.0 352 71.6
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 6.0e-130 468.0 347 73.8
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 1.0e-129 467.2 347 73.2
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 5.1e-129 464.9 349 73.1
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 6.7e-129 464.5 347 72.9
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 6.7e-129 464.5 346 71.4
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 8.7e-129 464.2 398 64.8
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.5e-128 463.4 349 72.8
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 1.9e-128 463.0 343 71.7
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 2.5e-128 462.6 343 72.3
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 3.3e-128 462.2 370 70.3
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 3.3e-128 462.2 317 77.9
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 7.4e-128 461.1 349 72.2
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 7.4e-128 461.1 349 72.2
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 2.8e-127 459.1 347 72.3
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 4.8e-127 458.4 305 80.0
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 4.8e-127 458.4 346 72.3
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 2.4e-126 456.1 349 71.6
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 9.0e-126 454.1 332 73.8
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 9.0e-126 454.1 342 72.5
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 1.5e-125 453.4 330 74.2
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 1.3e-124 450.3 350 71.1
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 6.4e-124 448.0 341 71.3
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 6.4e-124 448.0 341 71.3
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 6.4e-124 448.0 350 71.4
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 9.3e-123 444.1 342 71.6
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 1.2e-122 443.7 349 71.9
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 6.0e-122 441.4 347 70.6
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 5.1e-121 438.3 347 69.7
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 3.3e-120 435.6 314 72.9
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 1.3e-119 433.7 360 68.1
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 8.2e-119 431.0 315 71.7
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 1.1e-118 430.6 293 77.8
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 1.8e-118 429.9 309 75.1
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 1.8e-118 429.9 343 67.9
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 3.1e-118 429.1 349 65.0
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 2.7e-114 416.0 297 75.8
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 6.7e-113 411.4 322 66.5
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 8.5e-108 394.4 326 65.0
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 1.1e-107 394.0 289 74.0
SGA_v2.0_scaffold29G12072 Striga asiatica HOM05D006407 ORTHO05D008079 2.5e-107 392.9 366 63.4
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 2.5e-99 366.3 342 60.8
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 9.4e-99 364.4 289 67.5
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 6.7e-97 358.2 321 61.7
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 1.4e-86 323.9 239 72.4
unitig_62.g23866 Utricularia gibba HOM05D006407 ORTHO05D008079 6.3e-79 298.5 266 63.5
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 8.5e-76 288.1 191 79.6
SMO367G1011 Selaginella moellendorffii HOM05D006407 ORTHO05D008079 3.0e-73 279.6 309 49.8
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 4.4e-72 275.8 332 44.9
BolC7t44437H Brassica oleracea HOM05D006407 ORTHO05D008079 3.7e-71 272.7 281 60.9
HPP92_024262 Vanilla planifolia HOM05D006407 ORTHO05D008079 1.8e-70 270.4 195 70.3
BcaC06g30794 Brassica carinata HOM05D006407 ORTHO05D008079 2.0e-69 266.9 248 60.5
C07p39170 Brassica napus HOM05D006407 ORTHO05D008079 1.3e-68 264.2 268 60.4
Duzib138G1048 Durio zibethinus HOM05D006407 ORTHO05D008079 2.9e-68 263.1 379 46.7
Pp3c19_21450 Physcomitrium patens HOM05D006407 ORTHO05D008079 4.2e-67 259.2 329 43.2
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 1.3e-63 247.7 250 53.2
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 4.4e-56 222.6 173 69.9
Nn1g08232 Nelumbo nucifera HOM05D006407 ORTHO05D008079 2.3e-52 210.3 157 72.0
AUR62028699 Chenopodium quinoa HOM05D006407 ORTHO05D008079 4.7e-42 176.0 141 67.4
Migut.D00733 Erythranthe guttata HOM05D006407 ORTHO05D008079 8.3e-39 165.2 110 81.8
DCAR_004768 Daucus carota HOM05D006407 ORTHO05D008079 2.4e-38 163.7 157 61.8
A06p39160 Brassica napus HOM05D006407 ORTHO05D008079 1.7e-36 157.5 163 56.4
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 3.8e-31 139.8 309 33.7
BraA06t26831Z Brassica rapa HOM05D006407 ORTHO05D008079 7.1e-30 135.6 133 57.9
CDE02G0544 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 2.4e-22 110.5 82 69.5
Lsat_1_v5_gn_9_60420 Lactuca sativa HOM05D001780 ORTHO05D008079 5.4e-14 82.8 46 87.0
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 9.3e-14 82.0 251 29.5
arahy.Tifrunner.gnm1.ann1.91BFZF Arachis hypogaea HOM05D006407 ORTHO05D008079 3.9e-12 76.6 69 59.4
Cre09.g393800 Chlamydomonas reinhardtii HOM05D006407 ORTHO05D008079 6.7e-12 75.9 173 32.9
MD05G1159200 Malus domestica HOM05D006407 ORTHO05D008079 1.1e-11 75.1 48 75.0
Oeu032606.1 Olea europaea HOM05D006407 ORTHO05D008079 3.3e-11 73.6 65 60.0
arahy.Tifrunner.gnm1.ann1.6HQ4SR Arachis hypogaea HOM05D006407 ORTHO05D008079 1.3e-07 61.6 62 56.5


User provided reference genes

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