Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 2.7e-113 412.1 225 100.0
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.7e-80 303.1 186 79.0
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 9.5e-79 297.4 186 76.9
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 8.1e-78 294.3 186 77.4
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 8.1e-78 294.3 183 77.0
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 2.3e-77 292.7 189 76.7
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 8.9e-77 290.8 186 78.0
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 1.7e-75 286.6 216 64.8
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 4.9e-75 285.0 189 74.1
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 4.9e-75 285.0 217 65.9
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 6.4e-75 284.6 186 73.1
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 6.4e-75 284.6 219 66.7
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 1.1e-74 283.9 191 73.3
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 1.9e-74 283.1 186 74.7
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 2.4e-74 282.7 186 73.7
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 4.1e-74 282.0 186 72.6
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 7.1e-74 281.2 187 72.7
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 7.1e-74 281.2 193 73.1
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 1.2e-73 280.4 182 76.9
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 1.2e-73 280.4 205 68.8
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.6e-73 280.0 193 72.5
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 7.8e-73 277.7 193 72.0
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 1.0e-72 277.3 193 72.0
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 1.7e-72 276.6 183 74.3
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 1.7e-72 276.6 192 69.8
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 2.3e-72 276.2 193 72.0
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 3.9e-72 275.4 181 75.7
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 5.1e-72 275.0 192 69.8
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 8.6e-72 274.2 193 71.0
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 7.3e-71 271.2 193 69.9
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.6e-70 270.0 182 72.0
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 2.1e-70 269.6 190 70.0
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 2.8e-70 269.2 185 73.5
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 3.6e-70 268.9 185 71.4
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 4.7e-70 268.5 182 72.0
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 4.7e-70 268.5 191 68.1
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 4.7e-70 268.5 190 70.5
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 6.2e-70 268.1 193 66.8
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 6.2e-70 268.1 193 69.9
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 1.1e-69 267.3 194 70.6
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 1.4e-69 266.9 190 68.4
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 1.4e-69 266.9 180 72.8
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 1.8e-69 266.5 188 69.1
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 2.4e-69 266.2 189 69.8
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 2.4e-69 266.2 186 68.8
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 3.1e-69 265.8 186 68.3
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 5.2e-69 265.0 195 69.7
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 5.2e-69 265.0 190 68.4
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 5.2e-69 265.0 191 68.6
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 6.8e-69 264.6 186 68.3
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 2.0e-68 263.1 191 67.0
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.4e-68 261.9 182 69.2
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 7.6e-68 261.2 186 71.0
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 9.9e-68 260.8 184 70.1
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 1.3e-67 260.4 187 69.0
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 1.3e-67 260.4 185 67.0
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 6.4e-67 258.1 182 69.2
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 6.4e-67 258.1 183 68.9
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 6.4e-67 258.1 182 69.8
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 1.1e-66 257.3 186 65.1
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 1.1e-66 257.3 185 68.1
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 1.4e-66 256.9 186 65.6
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 1.4e-66 256.9 186 65.6
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.4e-66 256.1 182 68.7
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 4.2e-66 255.4 186 65.6
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 2.1e-65 253.1 186 65.1
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 3.5e-65 252.3 179 69.8
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 3.5e-65 252.3 191 64.9
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 6.0e-65 251.5 181 69.1
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 5.1e-64 248.4 187 66.8
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 8.7e-64 247.7 192 65.6
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 3.3e-63 245.7 186 64.5
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 7.3e-63 244.6 184 64.7
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 3.1e-61 239.2 168 73.2
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 5.3e-61 238.4 187 61.5
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 7.6e-60 234.6 187 64.2
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 7.6e-60 234.6 223 56.5
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 2.2e-59 233.0 187 63.1
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 3.8e-59 232.3 191 61.3
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 4.9e-59 231.9 223 56.1
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 4.9e-59 231.9 223 56.1
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 1.4e-58 230.3 223 56.1
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 1.9e-58 229.9 182 60.4
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 2.4e-58 229.6 180 63.9
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 4.2e-58 228.8 190 61.1
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 1.6e-57 226.9 190 60.5
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 2.1e-57 226.5 187 61.5
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 2.7e-57 226.1 189 61.9
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 2.7e-57 226.1 192 56.8
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 6.6e-56 221.5 190 59.5
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 7.4e-55 218.0 140 76.4
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 2.8e-54 216.1 186 59.7
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 8.1e-54 214.5 145 74.5
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 1.8e-53 213.4 178 61.2
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 9.9e-52 207.6 178 57.3
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 4.3e-47 192.2 180 49.4
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 4.3e-47 192.2 180 48.9
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 4.8e-46 188.7 181 53.0
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.1e-45 187.6 181 49.7
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 5.3e-45 185.3 193 53.4
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 3.2e-42 176.0 188 47.9
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 3.2e-42 176.0 189 51.3
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 2.1e-41 173.3 187 44.9
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.5e-39 167.2 180 46.1
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 1.3e-38 164.1 202 47.0
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 8.4e-35 151.4 194 43.3
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 3.3e-31 139.4 146 56.2
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 6.9e-29 131.7 176 45.5
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 3.4e-28 129.4 97 62.9
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 6.5e-27 125.2 87 69.0
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 3.6e-25 119.4 182 38.5
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 1.4e-24 117.5 83 67.5
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 7.2e-18 95.1 95 51.6
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 6.7e-16 88.6 201 32.8
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 8.8e-16 88.2 64 62.5
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 4.1e-13 79.3 97 40.2
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 4.2e-10 69.3 76 48.7
Cre10.g463800 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 1.1e-07 61.2 133 34.6
arahy.Tifrunner.gnm1.ann1.3M52EB Arachis hypogaea HOM05D007174 ORTHO05D010441 7.5e-07 58.5 64 50.0


User provided reference genes

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