Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 6.0e-239 830.5 430 100.0
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 1.6e-154 550.1 431 69.6
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 4.5e-154 548.5 434 70.3
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.7e-153 546.6 433 70.0
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 6.6e-153 544.7 462 67.5
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 1.5e-152 543.5 432 66.7
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 1.9e-152 543.1 432 68.5
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 1.9e-152 543.1 432 67.4
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 5.5e-152 541.6 432 68.5
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 1.6e-151 540.0 430 67.4
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 2.1e-151 539.7 432 67.6
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 4.7e-151 538.5 432 66.7
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 6.1e-151 538.1 432 66.4
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 3.0e-150 535.8 433 67.2
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 4.0e-150 535.4 433 68.4
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 1.5e-149 533.5 437 66.8
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 3.4e-149 532.3 432 66.9
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 5.7e-149 531.6 433 66.5
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 7.5e-149 531.2 433 66.1
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 2.8e-148 529.3 463 63.9
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 6.3e-148 528.1 432 66.4
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 1.1e-147 527.3 430 67.4
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 1.1e-147 527.3 430 65.6
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 4.1e-147 525.4 432 65.5
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 1.6e-146 523.5 460 62.6
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 2.0e-146 523.1 432 64.6
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 4.5e-146 521.9 432 66.2
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 4.5e-146 521.9 432 66.0
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 5.9e-146 521.5 430 66.3
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 2.3e-145 519.6 430 67.4
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 2.9e-145 519.2 431 66.6
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 2.9e-145 519.2 432 65.5
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 5.0e-145 518.5 432 65.0
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.5e-144 516.9 432 65.5
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 3.3e-144 515.8 432 66.0
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 7.3e-144 514.6 433 64.9
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 3.6e-143 512.3 433 64.2
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 3.6e-143 512.3 436 64.4
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 1.0e-142 510.8 432 64.4
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 1.4e-142 510.4 433 63.5
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 1.4e-142 510.4 430 63.5
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 1.4e-142 510.4 432 65.0
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 2.3e-142 509.6 456 61.8
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 4.0e-142 508.8 430 63.5
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 5.2e-142 508.4 411 69.3
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 8.9e-142 507.7 442 62.0
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 1.2e-141 507.3 436 64.7
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 1.5e-141 506.9 433 64.7
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 2.0e-141 506.5 433 64.4
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 2.0e-141 506.5 436 63.8
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 5.8e-141 505.0 442 65.2
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 7.5e-141 504.6 433 64.4
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 1.7e-140 503.4 438 63.0
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.9e-140 502.7 430 63.0
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 1.4e-139 500.4 432 62.7
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.4e-139 499.6 432 62.7
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 2.4e-139 499.6 433 63.0
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 7.0e-139 498.0 432 62.3
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 9.2e-139 497.7 433 63.7
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 1.2e-138 497.3 432 63.2
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 2.0e-138 496.5 430 62.3
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 2.0e-138 496.5 432 63.4
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 7.8e-138 494.6 431 62.4
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 1.7e-137 493.4 428 61.9
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 1.7e-137 493.4 432 61.6
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 1.7e-137 493.4 432 61.8
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 2.3e-137 493.0 431 62.6
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 5.0e-137 491.9 432 61.8
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 6.6e-137 491.5 432 62.0
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 1.9e-136 490.0 433 63.0
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 5.6e-136 488.4 432 61.3
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 1.2e-135 487.3 433 63.0
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 4.7e-135 485.3 433 61.2
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 6.2e-135 485.0 437 62.2
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 4.0e-134 482.3 463 58.3
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 6.8e-134 481.5 432 60.6
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 1.2e-133 480.7 432 60.2
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 1.5e-133 480.3 433 60.5
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 3.4e-133 479.2 409 64.3
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 5.8e-133 478.4 433 60.3
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 9.8e-133 477.6 433 60.3
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 1.3e-132 477.2 432 60.4
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 2.9e-132 476.1 482 55.8
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 6.4e-132 474.9 430 61.4
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 1.1e-131 474.2 433 59.6
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 1.1e-131 474.2 433 59.6
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 1.9e-131 473.4 433 61.0
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 3.2e-131 472.6 434 59.7
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 2.7e-130 469.5 434 60.4
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.7e-130 469.5 430 59.3
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.4e-123 447.2 430 57.7
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 9.2e-123 444.5 441 57.1
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 9.2e-123 444.5 441 57.4
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 6.0e-122 441.8 384 63.5
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 3.0e-121 439.5 375 63.2
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.7e-116 423.7 430 54.9
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 1.1e-115 421.0 438 55.3
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 2.7e-114 416.4 435 54.3
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 3.9e-113 412.5 307 73.6
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 6.6e-113 411.8 434 53.9
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 6.2e-111 405.2 435 53.3
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 1.6e-106 390.6 307 68.1
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 8.1e-103 378.3 463 50.3
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 2.4e-99 366.7 440 49.1
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 1.0e-97 361.3 439 49.9
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 1.1e-67 261.5 274 54.4
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 1.1e-62 245.0 469 35.8
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 3.5e-61 240.0 512 33.0
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 5.2e-57 226.1 187 63.1
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.3e-55 221.5 187 62.6
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.4e-54 218.0 187 62.0
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.9e-43 181.0 187 54.0
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 2.5e-43 180.6 393 34.6
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 4.0e-41 173.3 180 57.2
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 7.5e-40 169.1 142 59.2
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.1e-38 163.7 125 69.6
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 2.0e-37 161.0 102 73.5
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.3e-35 153.7 127 66.9
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 3.6e-34 150.2 109 73.4
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 2.9e-31 140.6 103 67.0
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.8e-26 124.0 95 69.5
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 3.1e-25 120.6 85 71.8
Lj9A174G23 Lonicera japonica HOM05D002866 ORTHO05D234197 1.1e-09 68.9 107 44.9
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 1.8e-09 68.2 162 32.7
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 4.4e-08 63.5 200 27.5
GSVIVG01032303001 Vitis vinifera HOM05D002866 ORTHO05D440048 5.8e-08 63.2 33 87.9
Lj9C161T2 Lonicera japonica HOM05D002866 ORTHO05D234048 2.4e-06 57.8 113 38.9


User provided reference genes

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