Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 5.3e-78 294.3 149 100.0
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 9.5e-51 203.8 111 90.1
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 3.6e-50 201.8 112 88.4
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 8.0e-50 200.7 112 88.4
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 1.1e-49 200.3 111 87.4
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 1.4e-49 199.9 112 86.6
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 4.0e-49 198.4 111 89.2
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 4.0e-49 198.4 109 90.8
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 5.2e-49 198.0 111 87.4
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 8.9e-49 197.2 111 85.6
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 8.9e-49 197.2 112 88.4
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 1.5e-48 196.4 111 88.3
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 3.4e-48 195.3 107 90.7
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 3.4e-48 195.3 111 86.5
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 5.8e-48 194.5 111 87.4
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 7.5e-48 194.1 112 86.6
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 2.9e-47 192.2 122 79.5
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 1.4e-46 189.9 111 82.9
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 1.9e-46 189.5 122 76.2
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 1.9e-46 189.5 111 82.0
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 1.9e-46 189.5 111 82.9
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 1.9e-46 189.5 111 84.7
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 2.4e-46 189.1 122 75.4
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 2.4e-46 189.1 117 80.3
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 3.2e-46 188.7 112 80.4
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 3.2e-46 188.7 112 80.4
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 3.2e-46 188.7 112 80.4
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 3.2e-46 188.7 112 80.4
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 3.2e-46 188.7 111 82.9
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 3.2e-46 188.7 111 84.7
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 4.1e-46 188.3 121 78.5
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 4.1e-46 188.3 142 69.7
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 4.1e-46 188.3 135 74.1
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 5.4e-46 188.0 111 83.8
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 5.4e-46 188.0 111 80.2
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 5.4e-46 188.0 121 78.5
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 5.4e-46 188.0 111 82.9
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 7.0e-46 187.6 111 83.8
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 7.0e-46 187.6 111 81.1
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 9.2e-46 187.2 111 82.0
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 1.2e-45 186.8 122 75.4
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 1.6e-45 186.4 111 82.9
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 1.6e-45 186.4 111 82.9
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 1.6e-45 186.4 111 81.1
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 2.7e-45 185.7 111 83.8
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 2.7e-45 185.7 111 79.3
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 2.7e-45 185.7 122 75.4
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 4.6e-45 184.9 119 79.0
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 6.0e-45 184.5 111 82.9
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 7.8e-45 184.1 111 82.9
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 7.8e-45 184.1 122 74.6
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 1.0e-44 183.7 111 81.1
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 1.0e-44 183.7 111 82.0
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 1.3e-44 183.3 111 82.0
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 1.3e-44 183.3 111 80.2
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.7e-44 183.0 111 79.3
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.7e-44 183.0 111 79.3
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 1.7e-44 183.0 112 75.9
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 2.3e-44 182.6 111 82.0
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 5.0e-44 181.4 111 80.2
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 5.0e-44 181.4 111 78.4
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 5.0e-44 181.4 111 78.4
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 8.6e-44 180.6 121 76.0
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 1.1e-43 180.3 111 79.3
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 1.9e-43 179.5 121 74.4
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 2.5e-43 179.1 112 76.8
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 3.3e-43 178.7 109 80.7
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 4.3e-43 178.3 111 75.7
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.2e-42 176.8 101 82.2
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 2.8e-42 175.6 111 79.3
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 2.8e-42 175.6 111 79.3
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 3.6e-42 175.3 103 80.6
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 6.2e-42 174.5 111 75.7
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 8.1e-42 174.1 111 75.7
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 8.1e-42 174.1 111 76.6
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 1.8e-41 172.9 111 74.8
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 1.8e-41 172.9 111 76.6
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 2.3e-41 172.6 111 75.7
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 3.1e-41 172.2 111 74.8
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 6.8e-41 171.0 111 74.8
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 8.9e-41 170.6 107 77.6
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 1.2e-40 170.2 96 88.5
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 3.4e-40 168.7 111 71.2
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 5.8e-40 167.9 107 77.6
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 5.8e-40 167.9 111 73.9
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 1.3e-39 166.8 111 70.3
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 1.3e-39 166.8 144 63.2
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 3.7e-39 165.2 97 82.5
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 3.7e-39 165.2 111 72.1
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 6.4e-39 164.5 112 68.8
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 6.4e-39 164.5 112 68.8
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 1.4e-38 163.3 106 77.4
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 1.2e-37 160.2 121 67.8
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 2.7e-37 159.1 111 73.9
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 1.0e-36 157.1 111 74.8
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 1.1e-33 147.1 113 67.3
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 4.0e-33 145.2 108 63.9
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 2.0e-32 142.9 107 63.6
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 6.4e-31 137.9 101 66.3
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 1.2e-29 133.7 78 88.5
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 1.6e-29 133.3 75 89.3
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 1.7e-28 129.8 71 83.1
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 2.3e-28 129.4 73 89.0
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 3.0e-28 129.0 76 85.5
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 6.6e-28 127.9 76 84.2
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 7.3e-27 124.4 76 78.9
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 1.3e-23 113.6 70 74.3
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 3.8e-23 112.1 106 51.9
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 2.4e-22 109.4 99 60.6
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.6e-21 106.7 73 68.5
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 7.8e-21 104.4 75 70.7
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.0e-20 104.0 67 74.6
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 6.9e-17 91.3 98 44.9
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 2.8e-10 69.3 105 39.0
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 1.4e-09 67.0 37 75.7
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 3.8e-07 58.9 39 61.5


User provided reference genes

Program Settings