Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A950T60 Lonicera japonica HOM05D003476 ORTHO05D004057 2.5e-62 241.9 120 100.0
DCAR_011789 Daucus carota HOM05D003476 ORTHO05D004057 6.5e-34 147.5 80 90.0
Dinv34422 Davidia involucrata HOM05D002885 ORTHO05D003350 6.5e-34 147.5 93 78.5
CSS0000698 Camellia sinensis var. sinensis HOM05D003476 ORTHO05D004057 8.5e-34 147.1 80 85.0
Migut.F01426 Erythranthe guttata HOM05D003476 ORTHO05D004057 1.4e-33 146.4 81 87.7
SGA_v2.0_scaffold76G25080 Striga asiatica HOM05D003476 ORTHO05D004057 4.2e-33 144.8 79 86.1
Actinidia00934 Actinidia chinensis HOM05D003476 ORTHO05D004057 5.5e-33 144.4 113 66.4
Nitab4.5_0000099g0220 Nicotiana tabacum HOM05D003476 ORTHO05D004057 3.6e-32 141.7 93 77.4
CAN.G1252.7 Capsicum annuum HOM05D003476 ORTHO05D004057 4.7e-32 141.4 93 76.3
Cc02_g06910 Coffea canephora HOM05D003476 ORTHO05D004057 6.1e-32 141.0 79 87.3
PGSC0003DMG400025078 Solanum tuberosum HOM05D003476 ORTHO05D004057 6.1e-32 141.0 93 77.4
Dinv20956 Davidia involucrata HOM05D003476 ORTHO05D004057 8.0e-32 140.6 80 83.8
Dinv20987 Davidia involucrata HOM05D003476 ORTHO05D004057 8.0e-32 140.6 80 83.8
Hma1.2p1_0710F.1_g207290 Hydrangea macrophylla HOM05D003476 ORTHO05D004057 8.0e-32 140.6 93 75.3
SalBow6G0036 Salvia bowleyana HOM05D003476 ORTHO05D004057 1.0e-31 140.2 79 82.3
SalBow6G0374 Salvia bowleyana HOM05D003476 ORTHO05D004057 1.0e-31 140.2 79 82.3
vmacro10062 Vaccinium macrocarpon HOM05D003476 ORTHO05D004057 1.0e-31 140.2 81 84.0
Hma1.2p1_2137F.1_g314920 Hydrangea macrophylla HOM05D003476 ORTHO05D004057 1.4e-31 139.8 93 74.2
Solyc04g072032.1 Solanum lycopersicum HOM05D003476 ORTHO05D004057 2.3e-31 139.0 93 76.3
MSTRG.8311 Avicennia marina HOM05D003476 ORTHO05D004057 3.0e-31 138.7 99 69.7
Sc09g0010500 Simmondsia chinensis HOM05D003476 ORTHO05D004057 3.0e-31 138.7 80 85.0
AUR62031591 Chenopodium quinoa HOM05D003476 ORTHO05D004057 5.2e-31 137.9 93 74.2
arahy.Tifrunner.gnm1.ann1.7TWC5I Arachis hypogaea HOM05D003476 ORTHO05D004057 6.7e-31 137.5 104 67.3
Nn2g13624 Nelumbo nucifera HOM05D003476 ORTHO05D004057 6.7e-31 137.5 80 83.8
Nitab4.5_0003770g0040 Nicotiana tabacum HOM05D003476 ORTHO05D004057 6.7e-31 137.5 93 75.3
Ah.10g035550 Amaranthus hybridus HOM05D003476 ORTHO05D004057 8.8e-31 137.1 93 74.2
arahy.Tifrunner.gnm1.ann1.C86U5P Arachis hypogaea HOM05D003476 ORTHO05D004057 1.1e-30 136.7 93 74.2
PGR142G4151 Punica granatum HOM05D003476 ORTHO05D004057 1.1e-30 136.7 93 74.2
AUR62012465 Chenopodium quinoa HOM05D003476 ORTHO05D004057 2.0e-30 136.0 80 82.5
ClCG07G004000 Citrullus lanatus HOM05D003476 ORTHO05D004057 2.6e-30 135.6 99 68.7
TWI73G1048 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 2.6e-30 135.6 93 73.1
Gohir.A10G229700 Gossypium hirsutum HOM05D003476 ORTHO05D004057 3.3e-30 135.2 93 75.3
Gorai.011G280300 Gossypium raimondii HOM05D003476 ORTHO05D004057 3.3e-30 135.2 93 75.3
Rhsim13G0104300 Rhododendron simsii HOM05D003476 ORTHO05D004057 3.3e-30 135.2 94 74.5
TWI73G1058 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 3.3e-30 135.2 93 73.1
MD15G1038100 Malus domestica HOM05D003476 ORTHO05D004057 4.4e-30 134.8 81 81.5
Sed0009203 Sechium edule HOM05D003476 ORTHO05D004057 5.7e-30 134.4 93 72.0
GSVIVG01016365001 Vitis vinifera HOM05D003476 ORTHO05D004057 5.7e-30 134.4 80 80.0
CiPaw.02G189900 Carya illinoinensis HOM05D003476 ORTHO05D004057 7.4e-30 134.0 93 73.1
CANSAT56G1382 Cannabis sativa HOM05D003476 ORTHO05D004057 9.7e-30 133.7 80 81.2
LjContig00357g0022102 Lotus japonicus HOM05D003476 ORTHO05D004057 1.3e-29 133.3 93 74.2
Haze_17184 Corylus avellana HOM05D003476 ORTHO05D004057 1.7e-29 132.9 79 82.3
ECA238G4332 Erigeron canadensis HOM05D003476 ORTHO05D004057 1.7e-29 132.9 93 72.0
HanXRQChr08g0222271 Helianthus annuus HOM05D003476 ORTHO05D004057 1.7e-29 132.9 93 73.1
Prupe.1G392100 Prunus persica HOM05D003476 ORTHO05D004057 1.7e-29 132.9 80 81.2
TAR633G1753 Trochodendron aralioides HOM05D003476 ORTHO05D004057 1.7e-29 132.9 93 72.0
Duzib114G0190 Durio zibethinus HOM05D003476 ORTHO05D004057 2.2e-29 132.5 93 72.0
ECA233G2895 Erigeron canadensis HOM05D003476 ORTHO05D004057 2.2e-29 132.5 95 73.7
Gohir.D10G243900 Gossypium hirsutum HOM05D003476 ORTHO05D004057 2.2e-29 132.5 93 75.3
Thecc.10G026100 Theobroma cacao HOM05D003476 ORTHO05D004057 2.2e-29 132.5 93 73.1
EL10Ac2g04131 Beta vulgaris HOM05D003476 ORTHO05D004057 2.8e-29 132.1 99 69.7
Eucgr.G03033 Eucalyptus grandis HOM05D003476 ORTHO05D004057 2.8e-29 132.1 80 80.0
RcHm_v2.0_Chr1g0369411 Rosa chinensis HOM05D003476 ORTHO05D004057 2.8e-29 132.1 79 79.7
Medtr5g081900 Medicago truncatula HOM05D003476 ORTHO05D004057 3.7e-29 131.7 93 72.0
Phvul.008G226300 Phaseolus vulgaris HOM05D003476 ORTHO05D004057 3.7e-29 131.7 80 80.0
CsaV3_5G008920 Cucumis sativus L. HOM05D003476 ORTHO05D004057 6.3e-29 131.0 93 69.9
HanXRQChr12g0370541 Helianthus annuus HOM05D003476 ORTHO05D004057 6.3e-29 131.0 90 71.1
TPR.G8041 Trifolium pratense HOM05D003476 ORTHO05D004057 6.3e-29 131.0 93 71.0
Glyma.14G061900 Glycine max HOM05D003476 ORTHO05D004057 8.2e-29 130.6 80 80.0
Sabra08G0047500 Salix brachista HOM05D003476 ORTHO05D004057 8.2e-29 130.6 80 80.0
TAR636G1152 Trochodendron aralioides HOM05D003476 ORTHO05D004057 8.2e-29 130.6 93 67.7
Manes.10G017601 Manihot esculenta HOM05D003476 ORTHO05D004057 1.1e-28 130.2 80 80.0
Sed0008497 Sechium edule HOM05D003476 ORTHO05D004057 1.1e-28 130.2 99 67.7
Os04g0446300 Oryza sativa ssp. japonica HOM05D003476 ORTHO05D004057 1.4e-28 129.8 77 80.5
Potri.008G064700 Populus trichocarpa HOM05D003476 ORTHO05D004057 1.4e-28 129.8 80 78.8
Potri.010G192700 Populus trichocarpa HOM05D003476 ORTHO05D004057 1.4e-28 129.8 80 82.5
SEGI_14870 Sequoiadendron giganteum HOM05D003476 ORTHO05D004057 1.4e-28 129.8 99 65.7
VMungo0647G2503 Vigna mungo HOM05D003476 ORTHO05D004057 1.4e-28 129.8 93 69.9
CiPaw.01G295800 Carya illinoinensis HOM05D003476 ORTHO05D004057 1.8e-28 129.4 80 78.8
Glyma.02G254500 Glycine max HOM05D003476 ORTHO05D004057 1.8e-28 129.4 80 81.2
Aqoxy2G00973 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 2.4e-28 129.0 93 72.0
COL.COLO4_25658 Corchorus olitorius HOM05D003476 ORTHO05D004057 2.4e-28 129.0 93 72.0
Sabra10G0148300 Salix brachista HOM05D003476 ORTHO05D004057 2.4e-28 129.0 78 80.8
TWI09G0086 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 2.4e-28 129.0 93 71.0
TWI23G0971 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 2.4e-28 129.0 93 71.0
BcaB06g29118 Brassica carinata HOM05D003476 ORTHO05D004057 3.1e-28 128.6 92 72.8
Ca_05932_v3 Cicer arietinum L. HOM05D003476 ORTHO05D004057 3.1e-28 128.6 93 71.0
MBI16_g26377_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 3.1e-28 128.6 80 75.0
Psat2g035640 Pisum sativum HOM05D003476 ORTHO05D004057 3.1e-28 128.6 93 71.0
RcHm_v2.0_Chr6g0299621 Rosa chinensis HOM05D003476 ORTHO05D004057 3.1e-28 128.6 80 80.0
THA.LOC104824307 Tarenaya hassleriana HOM05D003476 ORTHO05D004057 3.1e-28 128.6 93 71.0
vmacro06994 Vaccinium macrocarpon HOM05D003476 ORTHO05D004057 3.1e-28 128.6 82 78.0
MD08G1058200 Malus domestica HOM05D003476 ORTHO05D004057 4.1e-28 128.3 83 78.3
Carub.0004s2209 Capsella rubella HOM05D003476 ORTHO05D004057 5.3e-28 127.9 92 71.7
Thhalv10017265m.g Eutrema salsugineum HOM05D003476 ORTHO05D004057 5.3e-28 127.9 95 72.6
BcaB01g03582 Brassica carinata HOM05D003476 ORTHO05D004057 7.0e-28 127.5 92 71.7
A05p06460 Brassica napus HOM05D003476 ORTHO05D004057 7.0e-28 127.5 92 71.7
BraA03t11468Z Brassica rapa HOM05D003476 ORTHO05D004057 7.0e-28 127.5 92 71.7
Ciclev10032786m.g Citrus clementina HOM05D003476 ORTHO05D004057 7.0e-28 127.5 93 71.0
PSO801G0598 Papaver somniferum HOM05D003476 ORTHO05D004057 7.0e-28 127.5 80 80.0
AL4G37540 Arabidopsis lyrata HOM05D003476 ORTHO05D004057 9.1e-28 127.1 92 71.7
BcaC01g05451 Brassica carinata HOM05D003476 ORTHO05D004057 9.1e-28 127.1 92 71.7
C03p26520 Brassica napus HOM05D003476 ORTHO05D004057 9.1e-28 127.1 92 71.7
Sp4g22270 Schrenkiella parvula HOM05D003476 ORTHO05D004057 9.1e-28 127.1 92 69.6
Zm00001eb081650 Zea mays HOM05D003476 ORTHO05D004057 9.1e-28 127.1 80 80.0
BcaC02g07386 Brassica carinata HOM05D003476 ORTHO05D004057 1.2e-27 126.7 92 70.7
A04p30180 Brassica napus HOM05D003476 ORTHO05D004057 1.2e-27 126.7 92 71.7
BolC4t28272H Brassica oleracea HOM05D003476 ORTHO05D004057 1.2e-27 126.7 92 70.7
BraA04t18491Z Brassica rapa HOM05D003476 ORTHO05D004057 1.2e-27 126.7 117 59.0
BraA05t19614Z Brassica rapa HOM05D003476 ORTHO05D004057 1.2e-27 126.7 92 71.7
CDE04G3620 Ceratophyllum demersum HOM05D003476 ORTHO05D004057 1.2e-27 126.7 80 71.2
TWI53G1335 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 1.2e-27 126.7 93 68.8
THA.LOC104810073 Tarenaya hassleriana HOM05D003476 ORTHO05D004057 1.6e-27 126.3 93 71.0
unitig_747.g21420 Utricularia gibba HOM05D003476 ORTHO05D004057 1.6e-27 126.3 80 76.2
AT2G39960 Arabidopsis thaliana HOM05D003476 ORTHO05D004057 2.0e-27 125.9 92 70.7
A03p22400 Brassica napus HOM05D003476 ORTHO05D004057 2.0e-27 125.9 92 70.7
FvH4_7g24030 Fragaria vesca HOM05D003476 ORTHO05D004057 2.0e-27 125.9 79 74.7
FAN01G1497 Fragaria x ananassa HOM05D003476 ORTHO05D004057 2.0e-27 125.9 79 74.7
C04p67700 Brassica napus HOM05D003476 ORTHO05D004057 4.5e-27 124.8 92 69.6
Duzib128G2055 Durio zibethinus HOM05D003476 ORTHO05D004057 4.5e-27 124.8 93 68.8
FAN27G3190 Fragaria x ananassa HOM05D003476 ORTHO05D004057 4.5e-27 124.8 80 73.8
Aqoxy4G02660 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 5.9e-27 124.4 81 74.1
PSO339G6737 Papaver somniferum HOM05D003476 ORTHO05D004057 5.9e-27 124.4 80 77.5
Gohir.D13G017700 Gossypium hirsutum HOM05D003476 ORTHO05D004057 7.7e-27 124.0 80 77.5
Manes.07G125600 Manihot esculenta HOM05D003476 ORTHO05D004057 1.0e-26 123.6 93 67.7
Carub.0006s3211 Capsella rubella HOM05D003476 ORTHO05D004057 1.3e-26 123.2 92 69.6
Aa31LG5G19650 Aethionema arabicum HOM05D003476 ORTHO05D004057 1.7e-26 122.9 92 68.5
C04p07540 Brassica napus HOM05D003476 ORTHO05D004057 1.7e-26 122.9 79 75.9
BolC4t22371H Brassica oleracea HOM05D003476 ORTHO05D004057 1.7e-26 122.9 79 75.9
MBI14_g13584_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 1.7e-26 122.9 84 65.5
Nn5g27487 Nelumbo nucifera HOM05D003476 ORTHO05D004057 1.7e-26 122.9 77 76.6
CARHR134880 Cardamine hirsuta HOM05D003476 ORTHO05D004057 2.2e-26 122.5 92 68.5
Gorai.013G019600 Gossypium raimondii HOM05D003476 ORTHO05D004057 2.2e-26 122.5 80 76.2
MBI14_g25462_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 2.9e-26 122.1 80 67.5
Duzib106G0197 Durio zibethinus HOM05D003476 ORTHO05D004057 3.8e-26 121.7 93 69.9
Gohir.A13G016600 Gossypium hirsutum HOM05D003476 ORTHO05D004057 3.8e-26 121.7 80 75.0
HPP92_016193 Vanilla planifolia HOM05D003476 ORTHO05D004057 6.5e-26 120.9 89 67.4
AT4G04200 Arabidopsis thaliana HOM05D003476 ORTHO05D004057 8.5e-26 120.6 95 69.5
FAN03G0251 Fragaria x ananassa HOM05D003476 ORTHO05D004057 8.5e-26 120.6 79 73.4
Sp6g04580 Schrenkiella parvula HOM05D003476 ORTHO05D004057 1.1e-25 120.2 92 67.4
SpUn0110_0020 Schrenkiella parvula HOM05D003476 ORTHO05D004057 1.1e-25 120.2 92 67.4
Peaxi162Scf00360g00616 Petunia axillaris HOM05D003476 ORTHO05D004057 1.5e-25 119.8 93 69.9
Thhalv10028970m.g Eutrema salsugineum HOM05D003476 ORTHO05D004057 1.9e-25 119.4 92 67.4
MBI14_g36886_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 4.2e-25 118.2 80 65.0
Os02g0565200 Oryza sativa ssp. japonica HOM05D003476 ORTHO05D004057 7.2e-25 117.5 84 69.0
AL6G47820 Arabidopsis lyrata HOM05D003476 ORTHO05D004057 9.4e-25 117.1 95 65.3
CARHR253310 Cardamine hirsuta HOM05D003476 ORTHO05D004057 1.2e-24 116.7 92 64.1
MBI16_g37731_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 1.6e-24 116.3 104 55.8
MD07G1214300 Malus domestica HOM05D003476 ORTHO05D004057 6.1e-24 114.4 93 65.6
LjContig00357g0025168 Lotus japonicus HOM05D003476 ORTHO05D004057 8.0e-24 114.0 77 74.0
FvH4_2g40940 Fragaria vesca HOM05D003476 ORTHO05D004057 2.3e-23 112.5 69 75.4
Ah.16g104950 Amaranthus hybridus HOM05D003476 ORTHO05D004057 3.0e-23 112.1 80 71.2
AagrBONN_evm.TU.Sc2ySwM_228.5499 Anthoceros agrestis HOM05D003476 ORTHO05D004057 3.0e-23 112.1 80 67.5
Mapoly0043s0045 Marchantia polymorpha HOM05D003476 ORTHO05D004057 3.3e-22 108.6 78 65.4
Oeu036632.1 Olea europaea HOM05D003476 ORTHO05D004057 3.3e-22 108.6 61 85.2
ATR0618G195 Amborella trichopoda HOM05D003476 ORTHO05D004057 2.8e-21 105.5 68 70.6
Solyc04g072110.4 Solanum lycopersicum HOM05D003476 ORTHO05D004057 3.1e-20 102.1 61 78.7
Prupe.2G246200 Prunus persica HOM05D003476 ORTHO05D004057 1.2e-19 100.1 61 75.4
Aa31LG9G9900 Aethionema arabicum HOM05D002056 ORTHO05D002289 2.2e-18 95.9 93 61.3
CDE03G0334 Ceratophyllum demersum HOM05D003476 ORTHO05D004057 1.0e-15 87.0 62 64.5
MBI08_g04934_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 1.4e-15 86.7 68 61.8
CBR_g48322 Chara braunii HOM05D003476 ORTHO05D004057 4.0e-15 85.1 79 53.2
MELO3C025156.2 Cucumis melo HOM05D003476 ORTHO05D004057 1.7e-13 79.7 67 61.2
Cfa001366 Carpinus fangiana HOM05D003476 ORTHO05D004057 4.8e-13 78.2 77 59.7
Zm00001eb420270 Zea mays HOM05D000224 ORTHO05D002390 1.6e-11 73.2 54 66.7
Aqoxy214s003 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 2.1e-08 62.8 91 45.1
MBI14_g33799_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 1.4e-07 60.1 67 46.3
MBI14_g30458_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 2.3e-07 59.3 72 45.8
Lalb_Chr20g0116611 Lupinus albus HOM05D003476 ORTHO05D004057 7.5e-06 54.3 32 71.9


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