Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A926G31 Lonicera japonica HOM05D004534 ORTHO05D005413 3.7e-210 734.6 359 100.0
GSVIVG01016358001 Vitis vinifera HOM05D004534 ORTHO05D005413 2.9e-130 469.2 367 67.6
Actinidia03016 Actinidia chinensis HOM05D004534 ORTHO05D005413 7.2e-129 464.5 372 67.5
Cfa001577 Carpinus fangiana HOM05D004534 ORTHO05D005413 1.8e-127 459.9 371 66.6
CSS0028612 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 3.9e-127 458.8 381 65.9
Dinv31374 Davidia involucrata HOM05D004534 ORTHO05D005413 3.9e-127 458.8 331 71.9
CiPaw.01G277800 Carya illinoinensis HOM05D004534 ORTHO05D005413 5.7e-126 454.9 368 66.0
RcHm_v2.0_Chr1g0364391 Rosa chinensis HOM05D004534 ORTHO05D005413 6.3e-125 451.4 382 63.9
Lsat_1_v5_gn_8_20980 Lactuca sativa HOM05D004534 ORTHO05D005413 2.4e-124 449.5 363 66.4
Prupe.2G220600 Prunus persica HOM05D004534 ORTHO05D005413 3.5e-123 445.7 367 65.4
Haze_16951 Corylus avellana HOM05D004534 ORTHO05D005413 4.5e-123 445.3 380 64.2
MD07G1181700 Malus domestica HOM05D004534 ORTHO05D005413 7.7e-123 444.5 368 63.6
Ciclev10031838m.g Citrus clementina HOM05D004534 ORTHO05D005413 2.2e-122 443.0 358 65.9
PGR044G2491 Punica granatum HOM05D004534 ORTHO05D005413 2.1e-120 436.4 360 64.4
ECA233G2770 Erigeron canadensis HOM05D004534 ORTHO05D000452 3.6e-120 435.6 358 64.5
HanXRQChr08g0219701 Helianthus annuus HOM05D004534 ORTHO05D005413 1.4e-119 433.7 375 62.9
Gorai.009G315700 Gossypium raimondii HOM05D004534 ORTHO05D005413 2.3e-119 433.0 362 62.7
Atru.chr12.616 Acer truncatum HOM05D004534 ORTHO05D005413 4.0e-119 432.2 387 61.0
Potri.008G045700 Populus trichocarpa HOM05D004534 ORTHO05D005413 8.8e-119 431.0 351 63.5
Nn2g10612 Nelumbo nucifera HOM05D004534 ORTHO05D005413 2.0e-118 429.9 371 60.9
Gohir.D05G298500 Gossypium hirsutum HOM05D004534 ORTHO05D005413 4.4e-118 428.7 362 62.2
Potri.010G216000 Populus trichocarpa HOM05D004534 ORTHO05D005413 4.4e-118 428.7 358 64.2
TWI38G2053 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 1.3e-117 427.2 334 67.1
FAN06G4936 Fragaria x ananassa HOM05D004534 ORTHO05D005413 2.8e-117 426.0 401 59.4
Thecc.10G065400 Theobroma cacao HOM05D004534 ORTHO05D005413 1.8e-116 423.3 357 63.0
Atru.chr3.3749 Acer truncatum HOM05D004534 ORTHO05D005413 9.1e-116 421.0 372 60.2
Thhalv10002577m.g Eutrema salsugineum HOM05D004534 ORTHO05D005413 2.9e-114 416.0 350 61.7
Dinv32819 Davidia involucrata HOM05D004534 ORTHO05D005413 6.5e-114 414.8 364 61.0
Migut.F02016 Erythranthe guttata HOM05D004534 ORTHO05D005413 2.5e-113 412.9 370 61.9
AL5G24380 Arabidopsis lyrata HOM05D004534 ORTHO05D005413 9.4e-113 411.0 351 61.8
Aa31LG4G14970 Aethionema arabicum HOM05D004534 ORTHO05D005413 1.6e-112 410.2 350 60.0
Hma1.2p1_2042F.1_g312230 Hydrangea macrophylla HOM05D004534 ORTHO05D005413 1.6e-112 410.2 360 60.8
Sp5g15770 Schrenkiella parvula HOM05D004534 ORTHO05D005413 1.6e-112 410.2 350 60.9
COL.COLO4_23775 Corchorus olitorius HOM05D004534 ORTHO05D005413 2.1e-112 409.8 344 62.5
Zm00001eb397220 Zea mays HOM05D004534 ORTHO05D005413 4.7e-112 408.7 365 58.4
Nitab4.5_0000561g0030 Nicotiana tabacum HOM05D004534 ORTHO05D005413 1.0e-111 407.5 341 65.1
PSO339G4951 Papaver somniferum HOM05D004534 ORTHO05D005413 1.4e-111 407.1 368 60.6
GSVIVG01025090001 Vitis vinifera HOM05D004534 ORTHO05D005413 4.0e-111 405.6 368 60.9
Ciclev10030338m.g Citrus clementina HOM05D004534 ORTHO05D005413 8.8e-111 404.4 347 61.4
PSO384G4947 Papaver somniferum HOM05D004534 ORTHO05D005413 8.8e-111 404.4 369 60.7
Peaxi162Scf01024g00128 Petunia axillaris HOM05D004534 ORTHO05D005413 8.8e-111 404.4 383 60.3
Lalb_Chr24g0394391 Lupinus albus HOM05D004534 ORTHO05D005413 2.0e-110 403.3 350 61.4
Glyma.13G330000 Glycine max HOM05D004534 ORTHO05D005413 4.4e-110 402.1 358 59.5
Phvul.L001232 Phaseolus vulgaris HOM05D004534 ORTHO05D005413 5.7e-110 401.7 358 59.2
CsaV3_5G026040 Cucumis sativus L. HOM05D004534 ORTHO05D005413 7.5e-110 401.4 341 61.0
AT3G45740 Arabidopsis thaliana HOM05D004534 ORTHO05D005413 2.8e-109 399.4 355 59.2
arahy.Tifrunner.gnm1.ann1.NM19P7 Arachis hypogaea HOM05D004534 ORTHO05D005413 4.8e-109 398.7 349 59.9
Cpa.g.sc139.34 Carica papaya HOM05D004534 ORTHO05D005413 4.8e-109 398.7 349 60.5
A06p21280 Brassica napus HOM05D004534 ORTHO05D005413 6.3e-109 398.3 343 60.9
BraA06t25216Z Brassica rapa HOM05D004534 ORTHO05D005413 6.3e-109 398.3 343 60.9
Lj3g0025326 Lotus japonicus HOM05D004534 ORTHO05D005413 6.3e-109 398.3 363 59.2
TPR.G11635 Trifolium pratense HOM05D004534 ORTHO05D005413 6.3e-109 398.3 358 58.7
CARHR149920 Cardamine hirsuta HOM05D004534 ORTHO05D005413 1.1e-108 397.5 350 59.7
HPP92_003600 Vanilla planifolia HOM05D004534 ORTHO05D005413 1.1e-108 397.5 367 58.0
BolC3t19273H Brassica oleracea HOM05D004534 ORTHO05D005413 1.4e-108 397.1 361 59.0
MD11G1120100 Malus domestica HOM05D004534 ORTHO05D005413 1.4e-108 397.1 353 60.9
PGR102G1844 Punica granatum HOM05D004534 ORTHO05D005413 1.4e-108 397.1 353 60.3
CSS0009646 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 2.4e-108 396.4 343 60.9
Manes.11G138500 Manihot esculenta HOM05D004534 ORTHO05D005413 2.4e-108 396.4 363 59.0
BcaC01g01956 Brassica carinata HOM05D004534 ORTHO05D005413 3.1e-108 396.0 361 59.0
C03p70180 Brassica napus HOM05D004534 ORTHO05D005413 3.1e-108 396.0 361 59.0
Sabra08G0032000 Salix brachista HOM05D004534 ORTHO05D005413 3.1e-108 396.0 358 58.9
CANSAT54G1456 Cannabis sativa HOM05D004534 ORTHO05D005413 4.1e-108 395.6 362 59.4
arahy.Tifrunner.gnm1.ann1.AW7LWX Arachis hypogaea HOM05D004534 ORTHO05D005413 5.4e-108 395.2 349 59.6
FAN03G3228 Fragaria x ananassa HOM05D004534 ORTHO05D005413 7.0e-108 394.8 390 57.4
VMungo1080G0465 Vigna mungo HOM05D004534 ORTHO05D005413 7.0e-108 394.8 352 58.0
Medtr2g095830 Medicago truncatula HOM05D004534 ORTHO05D005413 9.1e-108 394.4 331 60.7
Cfa011397 Carpinus fangiana HOM05D004534 ORTHO05D005413 1.6e-107 393.7 333 61.9
Ca_01369_v3 Cicer arietinum L. HOM05D004534 ORTHO05D005413 2.7e-107 392.9 346 60.1
Psat5g281360 Pisum sativum HOM05D004534 ORTHO05D005413 3.5e-107 392.5 350 59.7
QL01p035546 Quercus lobata HOM05D004534 ORTHO05D005413 3.5e-107 392.5 346 60.4
THA.LOC104814850 Tarenaya hassleriana HOM05D004534 ORTHO05D005413 3.5e-107 392.5 356 58.1
TWI31G1398 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 3.5e-107 392.5 374 58.6
DCAR_018857 Daucus carota HOM05D004534 ORTHO05D005413 1.5e-105 387.1 342 59.9
Rhsim01G0222900 Rhododendron simsii HOM05D004534 ORTHO05D005413 1.5e-105 387.1 343 60.3
ATR0582G124 Amborella trichopoda HOM05D004534 ORTHO05D005413 1.9e-105 386.7 350 58.9
MELO3C025495.2 Cucumis melo HOM05D004534 ORTHO05D005413 1.9e-105 386.7 350 59.1
EL10Ac2g03539 Beta vulgaris HOM05D004534 ORTHO05D005413 2.5e-105 386.3 346 59.8
MELO3C026849.2 Cucumis melo HOM05D004534 ORTHO05D005413 1.2e-104 384.0 355 56.3
Peaxi162Scf00072g00025 Petunia axillaris HOM05D004534 ORTHO05D005413 2.1e-104 383.3 324 61.1
Nitab4.5_0000270g0130 Nicotiana tabacum HOM05D004534 ORTHO05D005413 2.8e-104 382.9 354 58.2
Thecc.09G335300 Theobroma cacao HOM05D004534 ORTHO05D005413 2.8e-104 382.9 370 57.0
Solyc06g075540.3 Solanum lycopersicum HOM05D004534 ORTHO05D005413 6.1e-104 381.7 364 57.4
FvH4_3g34110 Fragaria vesca HOM05D004534 ORTHO05D005413 2.3e-103 379.8 368 54.6
FAN11G3381 Fragaria x ananassa HOM05D004534 ORTHO05D005413 4.0e-103 379.0 368 54.6
CDE04G1344 Ceratophyllum demersum HOM05D004534 ORTHO05D005413 6.8e-103 378.3 375 56.0
TAR633G1279 Trochodendron aralioides HOM05D004534 ORTHO05D005413 2.0e-102 376.7 269 72.5
CsaV3_1G012750 Cucumis sativus L. HOM05D004534 ORTHO05D005413 4.4e-102 375.6 366 54.6
Gohir.D08G009000 Gossypium hirsutum HOM05D004534 ORTHO05D005413 5.7e-102 375.2 374 56.7
Nitab4.5_0004774g0020 Nicotiana tabacum HOM05D004534 ORTHO05D005413 5.7e-102 375.2 358 56.7
Oeu055059.2 Olea europaea HOM05D004534 ORTHO05D005413 7.5e-102 374.8 286 67.5
Sabra10G0167000 Salix brachista HOM05D004534 ORTHO05D005413 7.5e-102 374.8 286 68.2
CAN.G394.3 Capsicum annuum HOM05D004534 ORTHO05D005413 9.8e-102 374.4 356 57.3
RcHm_v2.0_Chr5g0061761 Rosa chinensis HOM05D004534 ORTHO05D005413 1.3e-101 374.0 371 54.7
Gohir.A08G000096 Gossypium hirsutum HOM05D004534 ORTHO05D005413 2.2e-101 373.2 377 56.8
FAN21G3213 Fragaria x ananassa HOM05D004534 ORTHO05D005413 3.7e-101 372.5 352 56.0
Sed0013966 Sechium edule HOM05D004534 ORTHO05D005413 8.3e-101 371.3 362 55.2
Aqoxy4G03153 Aquilegia oxysepala HOM05D004534 ORTHO05D005413 1.1e-100 370.9 330 59.7
PGSC0003DMG402006611 Solanum tuberosum HOM05D004534 ORTHO05D005413 1.1e-100 370.9 351 57.0
FAN01G1783 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.4e-100 370.5 414 53.4
FAN06G3998 Fragaria x ananassa HOM05D004534 ORTHO05D005413 2.4e-100 369.8 495 46.9
Os03g0284500 Oryza sativa ssp. japonica HOM05D004534 ORTHO05D005413 4.1e-100 369.0 356 55.1
Migut.D02166 Erythranthe guttata HOM05D004534 ORTHO05D005413 5.4e-100 368.6 341 58.1
MSTRG.18620 Avicennia marina HOM05D004534 ORTHO05D005413 1.2e-99 367.5 336 58.6
unitig_37.g12680 Utricularia gibba HOM05D004534 ORTHO05D005413 3.5e-99 365.9 323 58.2
Cc01_g11880 Coffea canephora HOM05D004534 ORTHO05D005413 7.8e-99 364.8 352 55.7
vmacro14490 Vaccinium macrocarpon HOM05D004534 ORTHO05D005413 1.0e-98 364.4 412 51.5
QL08p057247 Quercus lobata HOM05D004534 ORTHO05D005413 2.3e-98 363.2 530 44.3
Manes.10G040600 Manihot esculenta HOM05D004534 ORTHO05D005413 1.5e-97 360.5 365 58.1
Hund18962 Selenicereus undatus HOM05D004534 ORTHO05D005413 5.6e-97 358.6 331 56.8
FvH4_7g20500 Fragaria vesca HOM05D004534 ORTHO05D005413 6.1e-96 355.1 270 69.3
Gorai.004G002200 Gossypium raimondii HOM05D004534 ORTHO05D005413 8.0e-96 354.8 287 64.1
Ah.10g033090 Amaranthus hybridus HOM05D004534 ORTHO05D005413 1.4e-95 354.0 328 58.2
BcaB01g01071 Brassica carinata HOM05D004534 ORTHO05D005413 1.5e-94 350.5 348 53.7
Duzib106G1068 Durio zibethinus HOM05D004534 ORTHO05D005413 2.9e-93 346.3 357 55.5
Nitab4.5_0000830g0040 Nicotiana tabacum HOM05D004534 ORTHO05D005413 6.4e-93 345.1 339 59.0
CSS0050279 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 1.4e-92 344.0 382 53.1
AUR62009701 Chenopodium quinoa HOM05D004534 ORTHO05D005413 7.0e-92 341.7 322 56.2
EL10Ac7g15886 Beta vulgaris HOM05D004534 ORTHO05D005413 9.2e-92 341.3 364 52.5
Gohir.A05G298800 Gossypium hirsutum HOM05D004534 ORTHO05D005413 7.3e-89 331.6 262 65.3
Sc06g0008140 Simmondsia chinensis HOM05D004534 ORTHO05D005413 1.6e-88 330.5 376 50.0
Prupe.6G090300 Prunus persica HOM05D004534 ORTHO05D005413 8.3e-85 318.2 267 62.5
FAN25G2491 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.9e-84 317.0 392 47.2
CiPaw.13G104100 Carya illinoinensis HOM05D004534 ORTHO05D005413 2.7e-83 313.2 271 61.3
AUR62036013 Chenopodium quinoa HOM05D004534 ORTHO05D005413 6.8e-79 298.5 348 50.0
Sed0004393 Sechium edule HOM05D004534 ORTHO05D005413 1.7e-77 293.9 330 50.9
Lj1A180G32 Lonicera japonica HOM05D004534 ORTHO05D005413 1.9e-76 290.4 282 55.7
Carub.0005s1159 Capsella rubella HOM05D004534 ORTHO05D005413 2.4e-76 290.0 200 68.0
AUR62036245 Chenopodium quinoa HOM05D004534 ORTHO05D005413 6.0e-75 285.4 329 48.0
Oeu051854.2 Olea europaea HOM05D004534 ORTHO05D005413 2.3e-74 283.5 399 44.4
FAN16G0790 Fragaria x ananassa HOM05D004534 ORTHO05D005413 3.0e-74 283.1 368 45.9
Mapoly0029s0123 Marchantia polymorpha HOM05D004534 ORTHO05D005413 2.6e-70 270.0 351 43.3
MBI18_g24932_MAGBIO Magnolia biondii HOM05D004534 ORTHO05D005413 3.4e-70 269.6 522 35.8
Pp3c16_8740 Physcomitrium patens HOM05D004534 ORTHO05D005413 8.7e-66 255.0 352 41.8
COL.COLO4_18394 Corchorus olitorius HOM05D004534 ORTHO05D005413 8.1e-64 248.4 293 49.5
Ciclev10032311m.g Citrus clementina HOM05D004534 ORTHO05D005413 4.0e-63 246.1 261 54.8
FAN10G0821 Fragaria x ananassa HOM05D004534 ORTHO05D005413 2.0e-62 243.8 227 58.6
ClCG09G020370 Citrullus lanatus HOM05D004534 ORTHO05D005413 2.2e-61 240.4 332 43.4
SGA_v2.0_scaffold61G21215 Striga asiatica HOM05D004534 ORTHO05D005413 7.1e-60 235.3 237 51.9
SMO118G0317 Selaginella moellendorffii HOM05D004534 ORTHO05D005413 9.3e-60 235.0 337 42.7
CBR_g24062 Chara braunii HOM05D004534 ORTHO05D005413 5.3e-55 219.2 309 41.7
AagrBONN_evm.TU.Sc2ySwM_228.5090 Anthoceros agrestis HOM05D004534 ORTHO05D005413 2.1e-51 207.2 188 52.7
Cc09_g02390 Coffea canephora HOM05D004534 ORTHO05D005413 1.8e-50 204.1 182 59.3
Sopen06g031920 Solanum pennellii HOM05D004534 ORTHO05D005413 5.6e-49 199.1 186 55.9
Cpa.g.sc1.278 Carica papaya HOM05D004534 ORTHO05D005413 7.6e-38 162.2 249 43.4
Cc09_g02400 Coffea canephora HOM05D004534 ORTHO05D005413 1.9e-36 157.5 121 67.8
Nitab4.5_0000830g0060 Nicotiana tabacum HOM05D004534 ORTHO05D005413 2.0e-30 137.5 172 48.8
Cfa024137 Carpinus fangiana HOM05D004534 ORTHO05D005413 9.4e-28 128.6 359 30.6
PRCOL_00005152 Prasinoderma coloniale HOM05D004534 ORTHO05D005413 6.7e-26 122.5 296 31.1
VMungo0464G2039 Vigna mungo HOM05D004534 ORTHO05D005413 2.4e-23 114.0 95 57.9
Cre01.g013250 Chlamydomonas reinhardtii HOM05D004534 ORTHO05D005413 3.4e-22 110.2 306 27.1
RcHm_v2.0_Chr1g0364361 Rosa chinensis HOM05D003391 ORTHO05D005413 4.7e-19 99.8 56 78.6
Glyma.15G044000 Glycine max HOM05D004534 ORTHO05D005413 7.9e-19 99.0 81 61.7
CAN.G829.5 Capsicum annuum HOM05D004534 ORTHO05D005706 1.5e-17 94.7 64 65.6
Actinidia38238 Actinidia chinensis HOM05D004534 ORTHO05D005413 5.0e-13 79.7 133 39.8
AagrBONN_evm.TU.Sc2ySwM_117.2640 Anthoceros agrestis HOM05D012537 ORTHO05D009535 9.7e-09 65.5 35 74.3
SEGI_35437 Sequoiadendron giganteum HOM05D004534 ORTHO05D005413 6.3e-08 62.8 54 59.3
RcHm_v2.0_Chr5g0046071 Rosa chinensis HOM05D004534 ORTHO05D005413 2.6e-06 57.4 28 85.7
AUR62035991 Chenopodium quinoa HOM05D004534 ORTHO05D005413 3.5e-06 57.0 98 37.8


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