Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 2.3e-201 705.3 348 100.0
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 8.0e-125 451.1 347 65.4
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 3.0e-124 449.1 339 64.6
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 3.5e-120 435.6 339 64.3
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 4.2e-118 428.7 333 62.2
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 1.6e-117 426.8 333 64.0
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 4.7e-117 425.2 336 60.7
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 5.2e-116 421.8 332 61.4
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 2.6e-115 419.5 335 60.3
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 4.4e-115 418.7 333 62.5
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 6.3e-114 414.8 319 63.9
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 4.1e-113 412.1 335 60.6
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 9.2e-113 411.0 334 60.2
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 1.2e-112 410.6 336 60.4
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 1.7e-111 406.8 337 59.3
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 2.3e-111 406.4 342 59.4
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 3.8e-111 405.6 334 59.3
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 1.9e-110 403.3 333 58.9
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 3.3e-110 402.5 337 61.4
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 4.3e-110 402.1 337 58.8
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 5.6e-110 401.7 345 58.0
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 9.5e-110 401.0 338 59.2
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 2.1e-109 399.8 331 58.9
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 8.0e-109 397.9 343 59.8
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 1.8e-108 396.7 344 57.3
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 5.2e-108 395.2 320 61.2
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 6.8e-108 394.8 334 58.1
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 6.8e-108 394.8 337 57.6
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 1.5e-107 393.7 338 58.6
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 3.4e-107 392.5 337 58.2
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 3.4e-107 392.5 332 59.6
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 9.8e-107 391.0 331 61.0
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 2.2e-106 389.8 320 62.2
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 2.9e-106 389.4 336 57.4
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 6.4e-106 388.3 337 58.8
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 8.3e-106 387.9 337 58.5
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 2.4e-105 386.3 337 58.2
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 5.4e-105 385.2 336 58.9
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 7.0e-105 384.8 338 56.8
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 9.2e-105 384.4 334 57.5
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 1.2e-104 384.0 345 55.9
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.7e-104 382.9 334 56.9
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 7.8e-104 381.3 334 57.8
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 1.0e-103 380.9 319 58.6
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 6.6e-103 378.3 335 58.2
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 8.6e-103 377.9 336 57.1
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 1.1e-102 377.5 272 69.5
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 1.9e-102 376.7 334 56.6
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 5.6e-102 375.2 338 58.0
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 5.6e-102 375.2 337 57.0
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 4.7e-101 372.1 274 67.5
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 6.2e-101 371.7 308 61.0
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 8.0e-101 371.3 337 57.6
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 1.5e-99 367.1 308 60.1
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 3.4e-99 365.9 338 57.1
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 4.4e-99 365.5 337 53.4
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 1.7e-98 363.6 312 59.3
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 1.1e-97 360.9 337 53.7
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.9e-97 360.1 315 56.8
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 4.6e-96 355.5 261 65.5
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 3.0e-95 352.8 366 51.4
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 3.9e-95 352.4 342 55.6
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 6.2e-93 345.1 347 53.9
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 6.8e-92 341.7 288 58.7
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 6.8e-92 341.7 347 51.0
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 4.4e-91 339.0 347 53.3
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 9.8e-91 337.8 319 55.5
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 1.7e-90 337.0 344 53.8
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 3.7e-90 335.9 342 54.1
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 8.3e-90 334.7 341 51.0
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 1.1e-89 334.3 256 64.5
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 7.1e-89 331.6 341 51.9
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 1.7e-87 327.0 345 52.2
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 3.0e-87 326.2 281 59.8
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 3.3e-86 322.8 344 52.3
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 5.6e-86 322.0 327 54.4
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 3.6e-85 319.3 348 50.9
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 1.4e-84 317.4 356 51.1
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 1.8e-84 317.0 342 52.3
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 6.8e-84 315.1 309 54.4
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 8.9e-84 314.7 327 52.9
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 1.6e-80 303.9 321 49.8
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 3.1e-76 289.7 255 57.6
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 1.2e-75 287.7 243 63.4
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 2.0e-75 287.0 345 47.5
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 8.4e-74 281.6 255 58.0
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 2.4e-73 280.0 308 49.4
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 1.3e-71 274.2 247 60.7
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 5.6e-70 268.9 246 59.3
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 2.8e-69 266.5 275 53.8
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 2.0e-67 260.4 338 45.3
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 2.4e-65 253.4 202 61.4
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 1.4e-60 237.7 275 50.2
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 3.5e-56 223.0 179 62.0
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 1.0e-55 221.5 284 46.5
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 1.5e-54 217.6 248 52.0
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 1.1e-49 201.4 161 65.8
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 6.0e-48 195.7 337 37.4
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 1.3e-47 194.5 339 38.9
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 1.3e-47 194.5 221 47.5
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 3.3e-46 189.9 308 37.7
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 4.3e-46 189.5 320 36.2
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 2.8e-45 186.8 334 36.5
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 4.6e-40 169.5 359 32.6
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 1.8e-31 141.0 198 46.0
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 5.1e-31 139.4 160 45.0
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 3.3e-30 136.7 222 41.4
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 3.3e-30 136.7 197 43.1
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 1.3e-29 134.8 91 65.9
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 1.2e-27 128.3 86 60.5
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 1.0e-26 125.2 197 39.1
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 8.5e-26 122.1 231 39.4
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 1.9e-25 120.9 353 28.3
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 3.0e-23 113.6 75 64.0
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 1.1e-22 111.7 128 45.3
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 9.1e-20 102.1 88 54.5
TPR.G40057 Trifolium pratense HOM05D005940 ORTHO05D007027 1.2e-16 91.7 67 55.2
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 5.7e-14 82.8 79 54.4
CSS0026064 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 4.1e-12 76.6 47 66.0
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 1.6e-11 74.7 330 23.9
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 2.2e-10 70.9 152 31.6
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 1.5e-09 68.2 186 28.0
CSS0028355 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 2.5e-09 67.4 38 78.9


User provided reference genes

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