Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A901G38 Lonicera japonica HOM05D005664 ORTHO05D006509 1.5e-68 262.7 130 100.0
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 1.6e-49 199.5 126 74.6
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 5.9e-49 197.6 130 73.1
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 1.9e-47 192.6 125 74.4
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 2.1e-46 189.1 130 72.3
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 1.0e-45 186.8 125 70.4
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 1.8e-45 186.0 125 71.2
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 6.8e-45 184.1 124 69.4
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.5e-44 183.0 129 68.2
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.5e-44 183.0 129 68.2
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 7.5e-44 180.6 125 68.8
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 7.5e-44 180.6 129 69.0
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 3.2e-42 175.3 129 65.1
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 4.1e-42 174.9 123 65.0
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 1.2e-41 173.3 123 67.5
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 7.8e-41 170.6 122 68.9
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 1.3e-40 169.9 125 64.0
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 3.9e-40 168.3 129 63.6
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 2.5e-39 165.6 114 69.3
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 4.3e-39 164.9 127 63.8
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 5.6e-39 164.5 129 62.8
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 9.5e-39 163.7 123 61.8
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 1.6e-38 162.9 133 60.2
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 2.1e-38 162.5 124 66.1
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 3.6e-38 161.8 114 68.4
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 3.6e-38 161.8 114 68.4
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 4.7e-38 161.4 125 59.2
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 6.2e-38 161.0 128 62.5
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 6.2e-38 161.0 125 59.2
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 6.2e-38 161.0 129 62.0
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 1.1e-37 160.2 125 60.0
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 2.3e-37 159.1 125 60.0
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 4.0e-37 158.3 125 62.4
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 5.2e-37 157.9 122 60.7
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 5.2e-37 157.9 125 59.2
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 5.2e-37 157.9 125 58.4
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 8.9e-37 157.1 125 59.2
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 8.9e-37 157.1 126 58.7
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 2.6e-36 155.6 125 57.6
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 4.4e-36 154.8 142 55.6
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 4.4e-36 154.8 117 62.4
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 7.5e-36 154.1 124 58.9
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 7.5e-36 154.1 122 62.3
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 1.3e-35 153.3 124 60.5
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 2.2e-35 152.5 124 62.9
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 2.9e-35 152.1 127 57.5
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 2.9e-35 152.1 127 57.5
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 2.9e-35 152.1 126 57.1
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 2.9e-35 152.1 124 58.1
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 2.9e-35 152.1 124 58.1
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 3.7e-35 151.8 120 59.2
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 3.7e-35 151.8 123 58.5
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 2.4e-34 149.1 120 64.2
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 3.2e-34 148.7 134 57.5
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 7.0e-34 147.5 118 57.6
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 9.2e-34 147.1 132 53.8
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 9.2e-34 147.1 123 61.8
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 1.2e-33 146.7 122 55.7
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 1.2e-33 146.7 123 57.7
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 1.6e-33 146.4 124 62.1
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 4.6e-33 144.8 123 56.9
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 6.0e-33 144.4 127 56.7
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 1.0e-32 143.7 125 60.8
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 3.0e-32 142.1 123 53.7
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 5.1e-32 141.4 126 58.7
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 5.1e-32 141.4 123 53.7
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 5.1e-32 141.4 124 59.7
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 8.6e-32 140.6 122 56.6
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.5e-31 139.8 124 55.6
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.9e-31 139.4 124 55.6
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 2.5e-31 139.0 124 55.6
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 2.5e-31 139.0 130 51.5
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 3.3e-31 138.7 129 54.3
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 5.6e-31 137.9 121 59.5
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 9.5e-31 137.1 110 65.5
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 2.1e-30 136.0 125 54.4
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 2.1e-30 136.0 124 58.9
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 8.1e-30 134.0 124 50.8
Ah.04g166380 Amaranthus hybridus HOM05D005664 ORTHO05D006509 1.8e-29 132.9 130 50.0
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 2.3e-29 132.5 125 50.4
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 3.1e-29 132.1 110 63.6
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 4.0e-29 131.7 130 50.0
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 4.4e-28 128.3 133 49.6
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 4.4e-28 128.3 118 50.8
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 7.5e-28 127.5 126 54.0
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 2.2e-27 125.9 106 53.8
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 6.4e-27 124.4 127 49.6
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 8.3e-27 124.0 125 48.8
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 1.2e-25 120.2 131 53.4
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 1.6e-25 119.8 100 59.0
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 1.3e-24 116.7 125 46.4
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 2.3e-24 115.9 144 51.4
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 3.9e-24 115.2 125 48.0
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 7.3e-23 110.9 88 58.0
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 3.6e-22 108.6 135 49.6
Migut.H01706 Erythranthe guttata HOM05D005664 ORTHO05D006509 1.1e-21 107.1 126 49.2
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 6.8e-21 104.4 110 45.5
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 2.2e-19 99.4 124 48.4
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 2.9e-19 99.0 139 46.8
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 2.9e-19 99.0 124 49.2
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 2.1e-17 92.8 123 48.0
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 2.1e-17 92.8 123 48.0
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.3e-16 90.1 123 46.3
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 1.6e-14 83.2 125 36.0
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 2.1e-14 82.8 127 37.8
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 4.8e-14 81.6 126 38.9
Os02g0550000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D037008 1.3e-11 73.6 107 37.4
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 1.1e-10 70.5 142 37.3
ATR0021G035 Amborella trichopoda HOM05D005664 ORTHO05D006509 1.4e-10 70.1 90 45.6
AUR62017309 Chenopodium quinoa HOM05D005664 ORTHO05D006509 5.4e-10 68.2 92 41.3
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 1.6e-09 66.6 129 36.4
Zm00001eb422560 Zea mays HOM05D019841 ORTHO05D006509 2.1e-09 66.2 104 39.4
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 7.8e-09 64.3 135 36.3
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 2.3e-08 62.8 135 33.3
Os04g0431000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D006509 5.1e-08 61.6 120 35.0
Zm00001eb082760 Zea mays HOM05D019841 ORTHO05D006509 1.5e-07 60.1 123 33.3
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 1.9e-07 59.7 137 35.8
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 1.9e-07 59.7 137 35.8
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 3.3e-07 58.9 136 33.8
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 1.3e-06 57.0 136 35.3
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 1.3e-06 57.0 136 35.3
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 1.6e-06 56.6 134 32.1
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 2.1e-06 56.2 143 29.4
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 2.1e-06 56.2 136 31.6
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 4.8e-06 55.1 135 31.9
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 4.8e-06 55.1 135 31.9


User provided reference genes

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