Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A8T48 Lonicera japonica HOM05D000176 ORTHO05D000106 5.0e-90 334.3 159 100.0
Lj4A278T50 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-57 224.9 148 75.7
Lj8A631T22 Lonicera japonica HOM05D000176 ORTHO05D000106 9.2e-52 207.2 194 55.7
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-51 206.8 272 44.1
Lj1A1194T87 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-40 169.5 158 53.2
Lj7A25T29 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-36 155.2 199 48.7
Lj1A171T30 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-33 147.1 101 62.4
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-33 144.4 104 59.6
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-32 142.5 101 60.4
Lj2A512T36 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-32 141.0 157 45.2
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-31 139.8 271 32.8
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-31 139.0 99 61.6
Lj9A412T42 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-30 136.7 165 44.2
Lj4C435T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-29 133.3 138 55.1
Lj9P676T51 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-29 131.0 104 57.7
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-29 131.0 103 57.3
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-28 128.6 102 56.9
Lj7C702T2 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-28 128.6 105 55.2
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 5.4e-28 128.3 100 59.0
Lju41C46T7 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-28 127.9 170 40.6
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-27 126.3 227 37.4
Lj8P625T8 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-27 126.3 70 80.0
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-27 125.9 102 54.9
Lj4A312T8 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-27 125.9 102 54.9
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-27 125.2 98 55.1
Lj9A187T10 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-27 125.2 105 53.3
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-26 124.0 100 54.0
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-26 121.7 97 54.6
Lj2C708T1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.6e-26 121.3 101 55.4
Lj7A309T11 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-25 118.6 100 51.0
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-25 117.9 95 55.8
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-24 117.1 101 51.5
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.6e-24 115.5 95 54.7
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-24 115.2 95 54.7
Lj2P387T42 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-24 114.4 78 59.0
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-24 114.4 100 57.0
Lj5A195T79 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-23 114.0 95 55.8
Lj1A1169T72 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-23 112.8 97 55.7
Lj2A197T66 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-23 112.5 77 62.3
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-23 112.1 171 38.6
Lj1C600T2 Lonicera japonica HOM05D000176 ORTHO05D000106 5.2e-23 111.7 100 49.0
Lj4C452T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-22 109.8 92 54.3
Lj4A246T82 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-22 109.0 81 59.3
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-20 103.6 91 50.5
Lj6P257T7 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-19 99.8 74 59.5
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-18 96.7 200 35.5
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-18 96.3 199 36.2
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-18 95.5 74 54.1
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-18 95.5 100 47.0
Lj2C799T2 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-18 95.1 76 55.3
Lj7C461T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-17 93.2 147 37.4
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-17 92.8 105 41.0
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 9.6e-17 90.9 228 28.9
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-16 89.7 101 42.6
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-16 89.7 208 33.2
Lj8A550T28 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-16 89.7 94 45.7
Lj2A762T8 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-16 87.8 58 79.3
Lj4P206T17 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-15 87.0 46 84.8
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-15 87.0 99 44.4
Lj4C621T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-15 86.3 134 38.8
Lj5C479G2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-15 86.3 98 41.8
Lj8C619G11 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-15 85.5 98 41.8
Lj8C419G2 Lonicera japonica HOM05D004041 ORTHO05D004564 6.9e-15 84.7 118 37.3
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 9.0e-15 84.3 101 37.6
Lj4P278T38 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-14 83.6 46 82.6
Lj4C751G10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-14 83.2 63 69.8
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-14 82.8 216 30.6
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-14 82.4 172 36.6
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 4.4e-14 82.0 93 41.9
Lj2A942G28 Lonicera japonica HOM05D000176 ORTHO05D000106 5.8e-14 81.6 96 41.7
Lj1A609T10 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-14 81.3 98 39.8
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-14 81.3 102 49.0
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 2.2e-13 79.7 101 39.6
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 2.9e-13 79.3 93 39.8
Lj2A87G47 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-13 79.3 85 45.9
Lj5C240T12 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-13 78.6 62 53.2
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 6.4e-13 78.2 93 43.0
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 1.4e-12 77.0 93 39.8
Lj7A594T54 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-12 76.6 70 50.0
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 5.4e-12 75.1 93 41.9
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 5.4e-12 75.1 93 41.9
Lj4C692T4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.4e-12 75.1 73 47.9
Lj5A149T46 Lonicera japonica HOM05D000176 ORTHO05D000106 5.4e-12 75.1 112 37.5
Lj9P643T18 Lonicera japonica HOM05D000176 ORTHO05D000106 9.3e-12 74.3 53 64.2
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.2e-11 73.9 93 40.9
Hma1.2p1_0353F.1_g133150 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.6e-11 73.6 93 39.8
Lj1C9G10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-11 73.6 143 34.3
Lj1C99T4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-11 72.8 98 38.8
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-11 72.8 103 40.8
Lj7A368T39 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-11 72.8 67 49.3
Lj2A845T15 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-11 72.4 46 65.2
CSS0042022 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.0e-11 71.6 75 45.3
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-11 71.6 100 38.0
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-11 71.2 82 41.5
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.0e-10 70.9 77 44.2
Lj4A456T44 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-10 70.9 39 79.5
Lj1A54G39 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-10 70.5 154 33.1
Lj2A888T20 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-10 70.5 61 55.7
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.7e-10 70.1 77 44.2
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.7e-10 70.1 93 39.8
Lj3A910T42 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-10 70.1 138 34.8
Lju1295A4T34 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-10 70.1 61 54.1
Lju2000C0T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-10 70.1 61 54.1
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.3e-10 69.7 77 42.9
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-10 69.3 217 27.2
Ah.01g016230 Amaranthus hybridus HOM05D000176 ORTHO05D000106 6.6e-10 68.2 113 32.7
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-10 67.8 46 60.9
Lj8C735T3 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-10 67.8 73 41.1
Lj9P614T42 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-10 67.8 46 60.9
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.1e-09 67.4 93 38.7
Lj1P174T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-09 67.4 44 65.9
CSS0048564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.5e-09 67.0 128 34.4
Lj2C1012T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-09 67.0 36 75.0
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-09 66.2 46 60.9
Ah.01g016340 Amaranthus hybridus HOM05D000176 ORTHO05D000106 3.3e-09 65.9 72 41.7
Lj6C620T3 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-09 65.9 51 58.8
Ah.01g016400 Amaranthus hybridus HOM05D000176 ORTHO05D000106 4.3e-09 65.5 113 31.0
CSS0031463 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.3e-09 65.5 72 45.8
Lj5A53T37 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-09 65.5 68 47.1
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 4.3e-09 65.5 107 31.8
CSS0021450 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.6e-09 64.3 72 45.8
Lj2C47G9 Lonicera japonica HOM05D000176 ORTHO05D235791 9.6e-09 64.3 53 66.0
PSO675G7301 Papaver somniferum HOM05D000176 ORTHO05D000106 9.6e-09 64.3 102 31.4
Lj9C3T3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-08 63.9 73 41.1
Lj7C277T0 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-08 63.5 125 36.0
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 1.6e-08 63.5 86 38.4
Lj7C228G3 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-08 63.2 48 64.6
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 3.6e-08 62.4 74 41.9
Lj2A419T34 Lonicera japonica HOM05D000176 ORTHO05D000106 3.6e-08 62.4 147 30.6
CSS0002983 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.8e-08 62.0 72 41.7
CSS0037076 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.1e-08 61.2 72 41.7
Lj4C241T6 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-08 61.2 42 61.9
Lju158C6T6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-07 59.7 84 38.1
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 3.1e-07 59.3 68 42.6
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 3.1e-07 59.3 68 42.6
Migut.C00132 Erythranthe guttata HOM05D000176 ORTHO05D000106 3.1e-07 59.3 97 33.0
EL10Ac1g01303 Beta vulgaris HOM05D000176 ORTHO05D000106 6.9e-07 58.2 93 33.3
Lj7C321G1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-07 58.2 46 56.5
EL10Ac5g11701 Beta vulgaris HOM05D000176 ORTHO05D000106 9.0e-07 57.8 74 40.5
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 9.0e-07 57.8 98 31.6
Ca_11515_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-06 57.0 120 29.2
Ca_04467_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.0e-06 56.6 93 32.3
Ca_07399_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.0e-06 56.6 93 33.3
Lj2P503T10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-06 56.6 50 58.0
Ca_25773_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.4e-06 55.8 77 35.1
Lj6A725T107 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-06 55.5 52 46.2
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 4.5e-06 55.5 42 54.8
Ca_08875_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 5.8e-06 55.1 77 33.8
Ca_03376_v3 Cicer arietinum L. HOM05D003499 ORTHO05D004754 7.6e-06 54.7 77 32.5
Ca_03682_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 9.9e-06 54.3 93 31.2


User provided reference genes

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