Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A890T51 Lonicera japonica HOM05D004836 ORTHO05D005150 0.0e+00 1685.6 913 100.0
Dinv10337 Davidia involucrata HOM05D004836 ORTHO05D005150 5.2e-107 393.3 917 35.6
Dinv40862 Davidia involucrata HOM05D004836 ORTHO05D005150 2.1e-92 344.7 803 36.4
Actinidia05002 Actinidia chinensis HOM05D004836 ORTHO05D005150 1.9e-80 305.1 963 30.7
CSS0029600 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 6.8e-67 260.0 917 29.6
Actinidia37154 Actinidia chinensis HOM05D004836 ORTHO05D005150 2.7e-63 248.1 874 30.4
Rhsim06G0230000 Rhododendron simsii HOM05D004836 ORTHO05D005150 7.3e-53 213.4 968 27.9
GSVIVG01014692001 Vitis vinifera HOM05D004836 ORTHO05D005150 2.1e-52 211.8 1006 27.8
TAR626G1210 Trochodendron aralioides HOM05D004836 ORTHO05D005150 5.8e-42 177.2 968 26.0
Oeu014362.2 Olea europaea HOM05D004836 ORTHO05D005150 2.3e-38 165.2 1030 24.7
Oeu046935.1 Olea europaea HOM05D004836 ORTHO05D005150 1.0e-33 149.8 1083 23.6
TAR624G0729 Trochodendron aralioides HOM05D004836 ORTHO05D005150 2.2e-33 148.7 969 25.9
Haze_09829 Corylus avellana HOM05D004836 ORTHO05D005150 1.9e-32 145.6 1030 22.9
MD11G1029700 Malus domestica HOM05D004836 ORTHO05D005150 1.8e-30 139.0 405 34.8
Sopen07g033810 Solanum pennellii HOM05D004836 ORTHO05D005150 5.1e-30 137.5 934 24.4
DCAR_013235 Daucus carota HOM05D004836 ORTHO05D005150 8.7e-30 136.7 1031 23.9
Cc05_g14960 Coffea canephora HOM05D004836 ORTHO05D005150 1.5e-29 136.0 907 24.3
Solyc07g065600.3 Solanum lycopersicum HOM05D004836 ORTHO05D005150 1.6e-28 132.5 932 24.1
QL08p004015 Quercus lobata HOM05D004836 ORTHO05D005150 4.1e-27 127.9 1057 24.2
Nitab4.5_0002736g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 5.3e-27 127.5 1071 22.3
Nitab4.5_0007415g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 9.0e-27 126.7 1011 22.9
Rhsim04G0012500 Rhododendron simsii HOM05D004836 ORTHO05D005150 3.4e-26 124.8 932 23.3
Lsat_1_v5_gn_9_90560 Lactuca sativa HOM05D004836 ORTHO05D005150 5.9e-26 124.0 636 26.1
CAN.G623.12 Capsicum annuum HOM05D004836 ORTHO05D005150 8.5e-25 120.2 1012 22.6
MD03G1024600 Malus domestica HOM05D004836 ORTHO05D005150 7.2e-24 117.1 404 32.7
CiPaw.11G204300 Carya illinoinensis HOM05D004836 ORTHO05D005150 6.1e-23 114.0 321 35.5
Ca_25650_v3 Cicer arietinum L. HOM05D004836 ORTHO05D005150 8.2e-20 103.6 237 37.6
Peaxi162Scf00139g01321 Petunia axillaris HOM05D004836 ORTHO05D005150 3.1e-19 101.7 1076 22.3
Manes.03G141700 Manihot esculenta HOM05D004836 ORTHO05D005150 1.3e-17 96.3 401 32.7
ECA240G1942 Erigeron canadensis HOM05D004836 ORTHO05D000368 2.2e-17 95.5 932 21.5
SGA_v2.0_scaffold171G38861 Striga asiatica HOM05D004836 ORTHO05D005150 3.8e-17 94.7 284 32.0
Migut.M01650 Erythranthe guttata HOM05D004836 ORTHO05D005150 1.1e-16 93.2 886 23.4
Nn1g03169 Nelumbo nucifera HOM05D004836 ORTHO05D005150 1.1e-16 93.2 306 32.7
HanXRQChr13g0408421 Helianthus annuus HOM05D004836 ORTHO05D005150 1.9e-16 92.4 435 26.9
vmacro11592 Vaccinium macrocarpon HOM05D004836 ORTHO05D005150 4.2e-16 91.3 417 28.1
TPR.G26309 Trifolium pratense HOM05D004836 ORTHO05D005150 7.2e-16 90.5 232 35.8
Ciclev10007227m.g Citrus clementina HOM05D004836 ORTHO05D005150 6.1e-15 87.4 237 34.2
RcHm_v2.0_Chr1g0333641 Rosa chinensis HOM05D004836 ORTHO05D005150 3.9e-14 84.7 337 30.6
Lj5g0000015 Lotus japonicus HOM05D004836 ORTHO05D005150 1.1e-13 83.2 297 30.0
Sc03g0011330 Simmondsia chinensis HOM05D004836 ORTHO05D005150 1.3e-12 79.7 297 30.0
PSO541G5284 Papaver somniferum HOM05D004836 ORTHO05D005150 2.2e-12 79.0 190 35.3
PSO675G3612 Papaver somniferum HOM05D004836 ORTHO05D005150 2.2e-12 79.0 190 35.3
Medtr1g111660 Medicago truncatula HOM05D004836 ORTHO05D005150 4.8e-12 77.8 226 32.7
Psat6g230520 Pisum sativum HOM05D004836 ORTHO05D005150 4.8e-12 77.8 231 32.9
Glyma.10G277400 Glycine max HOM05D004836 ORTHO05D005150 1.4e-11 76.3 247 31.6
Glyma.20G112200 Glycine max HOM05D004836 ORTHO05D005150 1.4e-11 76.3 233 32.6
Prupe.5G032900 Prunus persica HOM05D004836 ORTHO05D005150 1.4e-11 76.3 975 22.4
SGA_v2.0_scaffold168G38564 Striga asiatica HOM05D004836 ORTHO05D005150 1.4e-11 76.3 296 32.4
Sabra16G0241300 Salix brachista HOM05D004836 ORTHO05D005150 3.1e-11 75.1 305 32.1
Lalb_Chr21g0309081 Lupinus albus HOM05D004836 ORTHO05D005150 4.1e-11 74.7 190 35.3
MBI15_g03895_MAGBIO Magnolia biondii HOM05D004836 ORTHO05D005150 4.1e-11 74.7 293 31.1
Potri.001G368200 Populus trichocarpa HOM05D004836 ORTHO05D005150 5.3e-11 74.3 757 24.6
Sc03g0011420 Simmondsia chinensis HOM05D004836 ORTHO05D005150 9.1e-11 73.6 297 29.6
TWI38G0981 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 9.1e-11 73.6 238 31.5
Manes.15G059500 Manihot esculenta HOM05D004836 ORTHO05D005150 1.2e-10 73.2 269 34.2
Eucgr.F02046 Eucalyptus grandis HOM05D004836 ORTHO05D005150 3.8e-09 68.2 280 28.9
FAN03G2987 Fragaria x ananassa HOM05D004836 ORTHO05D005150 3.8e-09 68.2 213 33.3
Duzib213G0869 Durio zibethinus HOM05D004836 ORTHO05D005150 8.5e-09 67.0 406 26.4
Psat2g132120 Pisum sativum HOM05D004836 ORTHO05D005150 8.5e-09 67.0 226 31.9
arahy.Tifrunner.gnm1.ann1.LI7RG4 Arachis hypogaea HOM05D004836 ORTHO05D005150 1.9e-08 65.9 336 26.5
arahy.Tifrunner.gnm1.ann1.TB163P Arachis hypogaea HOM05D004836 ORTHO05D005150 1.9e-08 65.9 336 26.5
Prupe.7G022200 Prunus persica HOM05D004836 ORTHO05D005150 1.9e-08 65.9 982 21.6
TWI39G0173 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 1.9e-08 65.9 245 29.8
FvH4_7g06090 Fragaria vesca HOM05D004836 ORTHO05D005150 4.2e-08 64.7 213 33.8
FAN01G1635 Fragaria x ananassa HOM05D004836 ORTHO05D005150 4.2e-08 64.7 213 33.8
FAN10G2990 Fragaria x ananassa HOM05D004836 ORTHO05D005150 5.5e-08 64.3 213 33.8
Lalb_Chr06g0166281 Lupinus albus HOM05D004836 ORTHO05D005150 1.2e-07 63.2 296 28.7
Gorai.013G152400 Gossypium raimondii HOM05D004836 ORTHO05D005150 1.6e-07 62.8 259 30.9
arahy.Tifrunner.gnm1.ann1.D5NCPP Arachis hypogaea HOM05D004836 ORTHO05D005150 2.7e-07 62.0 331 25.1
FAN06G1091 Fragaria x ananassa HOM05D004836 ORTHO05D005150 2.7e-07 62.0 213 33.8
Gohir.A13G132500 Gossypium hirsutum HOM05D004836 ORTHO05D005150 2.3e-06 58.9 409 26.4
Gorai.002G100500 Gossypium raimondii HOM05D004836 ORTHO05D005150 3.0e-06 58.5 380 26.3


User provided reference genes

Program Settings