Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A870G92 Lonicera japonica HOM05D005684 ORTHO05D007427 3.4e-141 505.0 252 100.0
Dinv22273 Davidia involucrata HOM05D005684 ORTHO05D007427 2.1e-135 485.7 252 95.2
Actinidia35335 Actinidia chinensis HOM05D005684 ORTHO05D007427 1.4e-134 483.0 252 95.2
Actinidia10725 Actinidia chinensis HOM05D005684 ORTHO05D007427 7.5e-133 477.2 252 94.4
Lsat_1_v5_gn_7_109480 Lactuca sativa HOM05D005684 ORTHO05D007427 7.5e-133 477.2 252 93.7
ECA236G3763 Erigeron canadensis HOM05D005684 ORTHO05D007427 1.3e-132 476.5 252 93.7
Peaxi162Scf00387g00210 Petunia axillaris HOM05D005684 ORTHO05D007427 1.3e-132 476.5 252 92.1
MSTRG.12968 Avicennia marina HOM05D005684 ORTHO05D007427 4.9e-132 474.6 252 92.1
HanXRQChr11g0336331 Helianthus annuus HOM05D005684 ORTHO05D007427 1.1e-131 473.4 252 93.3
Cc05_g13580 Coffea canephora HOM05D005684 ORTHO05D007427 7.0e-131 470.7 250 93.2
Solyc10g006320.3 Solanum lycopersicum HOM05D005684 ORTHO05D007427 7.0e-131 470.7 252 90.1
Sopen10g002270 Solanum pennellii HOM05D005684 ORTHO05D007427 2.1e-130 469.2 252 89.7
Nitab4.5_0005048g0050 Nicotiana tabacum HOM05D005684 ORTHO05D007427 2.7e-130 468.8 252 89.7
PGSC0003DMG400014423 Solanum tuberosum HOM05D005684 ORTHO05D007427 2.7e-130 468.8 252 89.7
Migut.H01837 Erythranthe guttata HOM05D005684 ORTHO05D007427 6.0e-130 467.6 252 90.9
Potri.001G424600 Populus trichocarpa HOM05D005684 ORTHO05D007427 2.3e-129 465.7 249 91.6
Lj6g0016495 Lotus japonicus HOM05D005684 ORTHO05D007427 6.6e-129 464.2 250 91.2
arahy.Tifrunner.gnm1.ann1.A1QMDX Arachis hypogaea HOM05D005684 ORTHO05D007427 1.1e-128 463.4 250 90.8
arahy.Tifrunner.gnm1.ann1.G9AZJ3 Arachis hypogaea HOM05D005684 ORTHO05D007427 1.1e-128 463.4 250 90.8
Manes.03G124800 Manihot esculenta HOM05D005684 ORTHO05D007427 1.9e-128 462.6 249 89.6
CANSAT21G0158 Cannabis sativa HOM05D005684 ORTHO05D007427 2.5e-128 462.2 249 90.0
vmacro09729 Vaccinium macrocarpon HOM05D005684 ORTHO05D007427 3.3e-128 461.8 272 86.4
Sc16g0006290 Simmondsia chinensis HOM05D005684 ORTHO05D007427 7.3e-128 460.7 251 90.0
FvH4_3g22390 Fragaria vesca HOM05D005684 ORTHO05D007427 2.1e-127 459.1 250 89.2
Medtr3g051210 Medicago truncatula HOM05D005684 ORTHO05D007427 3.6e-127 458.4 252 89.7
GSVIVG01037615001 Vitis vinifera HOM05D005684 ORTHO05D007427 3.6e-127 458.4 251 91.2
ClCG10G005500 Citrullus lanatus HOM05D005684 ORTHO05D007427 4.7e-127 458.0 249 89.6
TPR.G16583 Trifolium pratense HOM05D005684 ORTHO05D007427 4.7e-127 458.0 252 90.1
FAN21G0196 Fragaria x ananassa HOM05D005684 ORTHO05D007427 6.2e-127 457.6 250 88.8
TAR383G0098 Trochodendron aralioides HOM05D005684 ORTHO05D007427 8.1e-127 457.2 252 90.1
MD11G1221300 Malus domestica HOM05D005684 ORTHO05D007427 1.1e-126 456.8 249 89.6
Manes.15G073300 Manihot esculenta HOM05D005684 ORTHO05D007427 1.1e-126 456.8 249 88.8
RcHm_v2.0_Chr5g0039061 Rosa chinensis HOM05D005684 ORTHO05D007427 1.1e-126 456.8 250 88.8
CsaV3_3G005220 Cucumis sativus L. HOM05D005684 ORTHO05D007427 1.4e-126 456.4 249 89.2
Phvul.006G040700 Phaseolus vulgaris HOM05D005684 ORTHO05D007427 1.4e-126 456.4 250 90.4
VMungo0540G0423 Vigna mungo HOM05D005684 ORTHO05D007427 1.4e-126 456.4 250 90.4
CiPaw.12G128600 Carya illinoinensis HOM05D005684 ORTHO05D007427 1.8e-126 456.1 246 90.7
Glyma.08G314600 Glycine max HOM05D005684 ORTHO05D007427 1.8e-126 456.1 250 89.2
Ca_14720_v3 Cicer arietinum L. HOM05D005684 ORTHO05D007427 3.1e-126 455.3 252 89.7
MD03G1205400 Malus domestica HOM05D005684 ORTHO05D007427 5.2e-126 454.5 250 88.4
Cpa.g.sc97.28 Carica papaya HOM05D005684 ORTHO05D007427 6.8e-126 454.1 250 89.6
Ciclev10009283m.g Citrus clementina HOM05D005684 ORTHO05D007427 8.9e-126 453.8 250 88.0
TWI38G0783 Tripterygium wilfordii HOM05D005684 ORTHO05D007427 1.2e-125 453.4 250 88.0
Aqoxy7G03212 Aquilegia oxysepala HOM05D005684 ORTHO05D007427 1.5e-125 453.0 251 88.4
Eucgr.F03458 Eucalyptus grandis HOM05D005684 ORTHO05D007427 2.0e-125 452.6 250 88.8
ATR0749G094 Amborella trichopoda HOM05D005684 ORTHO05D007427 3.4e-125 451.8 251 87.6
FAN11G1729 Fragaria x ananassa HOM05D005684 ORTHO05D007427 3.4e-125 451.8 258 86.4
Sed0015085 Sechium edule HOM05D005684 ORTHO05D007427 5.8e-125 451.1 249 88.4
Lalb_Chr06g0171921 Lupinus albus HOM05D005684 ORTHO05D007427 9.9e-125 450.3 250 88.4
Glyma.18G099600 Glycine max HOM05D005684 ORTHO05D007427 1.7e-124 449.5 250 88.0
QL09p032912 Quercus lobata HOM05D005684 ORTHO05D007427 2.9e-124 448.7 246 89.8
PGR031G1629 Punica granatum HOM05D005684 ORTHO05D007427 8.3e-124 447.2 249 87.6
Medtr7g033650 Medicago truncatula HOM05D005684 ORTHO05D007427 1.1e-123 446.8 252 88.1
QL08p011467 Quercus lobata HOM05D005684 ORTHO05D007427 1.4e-123 446.4 246 90.2
PSO170G3986 Papaver somniferum HOM05D005684 ORTHO05D007427 2.4e-123 445.7 244 90.2
QL08p011589 Quercus lobata HOM05D005684 ORTHO05D007427 4.1e-123 444.9 246 89.8
Gohir.D01G065700 Gossypium hirsutum HOM05D005684 ORTHO05D007427 7.1e-123 444.1 244 89.3
Gorai.002G087600 Gossypium raimondii HOM05D005684 ORTHO05D007427 7.1e-123 444.1 244 89.3
RhsimUnG0251500 Rhododendron simsii HOM05D001404 ORTHO05D002309 9.2e-123 443.7 233 94.8
Nn8g40268 Nelumbo nucifera HOM05D005684 ORTHO05D007427 1.6e-122 443.0 251 85.7
Gohir.A01G078600 Gossypium hirsutum HOM05D005684 ORTHO05D007427 2.1e-122 442.6 244 88.9
THA.LOC104817661 Tarenaya hassleriana HOM05D005684 ORTHO05D007427 3.5e-122 441.8 250 84.8
PSO017G1132 Papaver somniferum HOM05D005684 ORTHO05D007427 4.6e-122 441.4 244 89.3
AT4G27040 Arabidopsis thaliana HOM05D005684 ORTHO05D007427 7.8e-122 440.7 250 84.0
SGA_v2.0_scaffold9G05066 Striga asiatica HOM05D005684 ORTHO05D007427 1.0e-121 440.3 269 83.3
MBI15_g26086_MAGBIO Magnolia biondii HOM05D005684 ORTHO05D007427 1.3e-121 439.9 248 87.9
Carub.0007s1380 Capsella rubella HOM05D005684 ORTHO05D007427 1.7e-121 439.5 249 83.9
Thhalv10014489m.g Eutrema salsugineum HOM05D005684 ORTHO05D007427 3.0e-121 438.7 250 84.4
AL7G25790 Arabidopsis lyrata HOM05D005684 ORTHO05D007427 3.9e-121 438.3 250 83.2
CAN.G1781.5 Capsicum annuum HOM05D005684 ORTHO05D007427 6.6e-121 437.6 236 88.6
Sabra16G0288400 Salix brachista HOM05D005684 ORTHO05D007427 6.6e-121 437.6 296 77.4
Aa31LG3G10790 Aethionema arabicum HOM05D005684 ORTHO05D007427 7.3e-120 434.1 255 83.1
Nitab4.5_0001393g0150 Nicotiana tabacum HOM05D005684 ORTHO05D007427 1.6e-119 433.0 252 84.5
Sp7g25020 Schrenkiella parvula HOM05D005684 ORTHO05D007427 1.6e-119 433.0 250 84.0
CARHR234690 Cardamine hirsuta HOM05D005684 ORTHO05D007427 2.8e-119 432.2 250 82.4
Duzib170G0103 Durio zibethinus HOM05D005684 ORTHO05D007427 2.8e-119 432.2 244 86.9
Cfa020373 Carpinus fangiana HOM05D005684 ORTHO05D007427 1.4e-118 429.9 230 90.0
BcaC06g32714 Brassica carinata HOM05D005684 ORTHO05D007427 2.4e-118 429.1 250 82.8
BolC7t46008H Brassica oleracea HOM05D005684 ORTHO05D007427 2.4e-118 429.1 250 82.8
Thhalv10026070m.g Eutrema salsugineum HOM05D005684 ORTHO05D007427 3.1e-118 428.7 250 82.4
A03p57030 Brassica napus HOM05D005684 ORTHO05D007427 4.0e-118 428.3 250 82.8
C07p55040 Brassica napus HOM05D005684 ORTHO05D007427 4.0e-118 428.3 250 82.8
BraA03t14772Z Brassica rapa HOM05D005684 ORTHO05D007427 6.8e-118 427.6 250 82.4
COL.COLO4_09643 Corchorus olitorius HOM05D005684 ORTHO05D007427 6.8e-118 427.6 250 85.6
A01p18200 Brassica napus HOM05D005684 ORTHO05D007427 1.5e-117 426.4 250 82.4
BraA01t01775Z Brassica rapa HOM05D005684 ORTHO05D007427 1.5e-117 426.4 250 82.4
SEGI_16862 Sequoiadendron giganteum HOM05D005684 ORTHO05D007427 4.4e-117 424.9 252 81.3
BcaC09g50622 Brassica carinata HOM05D005684 ORTHO05D007427 3.8e-116 421.8 250 82.0
Aa31LG5G10350 Aethionema arabicum HOM05D005684 ORTHO05D007427 1.9e-115 419.5 297 71.0
Haze_09656 Corylus avellana HOM05D005684 ORTHO05D007427 2.4e-115 419.1 246 85.0
Hma1.2p1_0673F.1_g201210 Hydrangea macrophylla HOM05D005684 ORTHO05D007427 1.6e-114 416.4 257 84.0
Oeu062595.4 Olea europaea HOM05D005684 ORTHO05D007427 2.7e-114 415.6 363 62.5
Os09g0529700 Oryza sativa ssp. japonica HOM05D005684 ORTHO05D007427 2.8e-111 405.6 249 79.5
Os11g0670700 Oryza sativa ssp. japonica HOM05D005684 ORTHO05D007427 6.9e-110 401.0 249 78.3
SMO232G0102 Selaginella moellendorffii HOM05D005684 ORTHO05D007427 1.3e-108 396.7 245 75.5
CDE08G1370 Ceratophyllum demersum HOM05D005684 ORTHO05D007427 1.7e-105 386.3 243 77.8
Mapoly0007s0150 Marchantia polymorpha HOM05D005684 ORTHO05D007427 8.7e-105 384.0 242 74.8
BolC1t02253H Brassica oleracea HOM05D005684 ORTHO05D007427 2.8e-103 379.0 252 73.8
HPP92_001822 Vanilla planifolia HOM05D005684 ORTHO05D007427 8.1e-103 377.5 213 86.9
Pp3c10_13560 Physcomitrium patens HOM05D005684 ORTHO05D007427 2.0e-101 372.9 239 77.0
Prupe.4G210400 Prunus persica HOM05D005684 ORTHO05D007427 7.6e-101 370.9 250 75.6
AUR62020473 Chenopodium quinoa HOM05D005684 ORTHO05D007427 1.6e-98 363.2 251 72.9
EL10Ac4g07848 Beta vulgaris HOM05D005684 ORTHO05D007427 1.3e-95 353.6 251 72.9
BolC1t02251H Brassica oleracea HOM05D005684 ORTHO05D007427 3.7e-95 352.1 237 73.8
CBR_g28043 Chara braunii HOM05D005684 ORTHO05D007427 1.7e-92 343.2 238 69.3
SEGI_13452 Sequoiadendron giganteum HOM05D005684 ORTHO05D007427 9.3e-91 337.4 206 81.1
FAN16G3416 Fragaria x ananassa HOM05D005684 ORTHO05D007427 1.0e-89 334.0 194 86.1
Psat5g180640 Pisum sativum HOM05D005684 ORTHO05D007427 2.1e-87 326.2 183 85.8
AUR62015738 Chenopodium quinoa HOM05D005684 ORTHO05D007427 3.8e-84 315.5 325 54.8
Zm00001eb103240 Zea mays HOM05D005684 ORTHO05D007427 1.1e-83 313.9 187 82.9
Ah.06g186400 Amaranthus hybridus HOM05D005684 ORTHO05D007427 3.2e-75 285.8 209 69.4
Cre17.g706650 Chlamydomonas reinhardtii HOM05D005684 ORTHO05D007427 4.2e-75 285.4 240 56.7
MELO3C032233.2 Cucumis melo HOM05D005684 ORTHO05D007427 1.6e-74 283.5 151 92.1
C01p23200 Brassica napus HOM05D005684 ORTHO05D007427 1.3e-71 273.9 184 72.8
MCO16G427 Micromonas commoda HOM05D005684 ORTHO05D007427 3.6e-66 255.8 249 51.0
Duzib213G0140 Durio zibethinus HOM05D005684 ORTHO05D007427 4.7e-66 255.4 211 66.8
AagrBONN_evm.TU.Sc2ySwM_228.646 Anthoceros agrestis HOM05D005684 ORTHO05D007427 5.7e-64 248.4 152 77.0
CAN.G915.10 Capsicum annuum HOM05D005684 ORTHO05D007427 5.7e-64 248.4 198 64.6
Thecc.07G042900 Theobroma cacao HOM05D005684 ORTHO05D007427 8.8e-57 224.6 250 53.2
TAR626G1586 Trochodendron aralioides HOM05D005684 ORTHO05D007427 4.4e-56 222.2 130 85.4
GSVIVG01037619001 Vitis vinifera HOM05D005684 ORTHO05D007427 2.9e-52 209.5 120 87.5
TAR626G0395 Trochodendron aralioides HOM05D005684 ORTHO05D007427 1.3e-47 194.1 99 94.9
PRCOL_00005955 Prasinoderma coloniale HOM05D005684 ORTHO05D007427 2.8e-47 193.0 249 45.4
MELO3C031910.2 Cucumis melo HOM05D005684 ORTHO05D007427 2.9e-44 183.0 99 86.9
Dinv40739 Davidia involucrata HOM05D005684 ORTHO05D007427 1.5e-43 180.6 158 65.8
PGR142G1953 Punica granatum HOM05D005684 ORTHO05D007427 4.2e-43 179.1 99 84.8
C01p23160 Brassica napus HOM05D005684 ORTHO05D007427 1.3e-39 167.5 99 79.8
Prupe.5G052500 Prunus persica HOM05D005684 ORTHO05D007427 2.8e-39 166.4 99 81.8
Cfa026637 Carpinus fangiana HOM05D005684 ORTHO05D007427 8.3e-39 164.9 253 35.2
CAN.G1192.5 Capsicum annuum HOM05D005684 ORTHO05D000076 6.8e-33 145.2 128 61.7
HanXRQChr09g0268041 Helianthus annuus HOM05D005684 ORTHO05D007427 2.3e-20 103.6 103 55.3
SEGI_35638 Sequoiadendron giganteum HOM05D005684 ORTHO05D007427 2.1e-18 97.1 69 63.8
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 2.6e-16 90.1 137 46.0
SEGI_36060 Sequoiadendron giganteum HOM05D005684 ORTHO05D383802 4.1e-14 82.8 56 71.4
AagrBONN_evm.TU.Sc2ySwM_340.2023 Anthoceros agrestis HOM05D005684 ORTHO05D007427 2.1e-13 80.5 55 70.9
Hma1.2p1_0212F.1_g090110 Hydrangea macrophylla HOM05D005684 ORTHO05D048316 2.1e-13 80.5 44 79.5
GSVIVG01037618001 Vitis vinifera HOM05D005684 ORTHO05D048316 2.6e-08 63.5 30 90.0
Zm00001eb057030 Zea mays HOM05D000424 ORTHO05D000355 1.4e-06 57.8 55 60.0


User provided reference genes

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