Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 7.1e-254 880.2 461 100.0
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 1.4e-116 424.1 483 55.1
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 6.9e-92 342.0 445 50.1
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 3.9e-87 326.2 376 54.0
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 3.4e-83 313.2 475 46.9
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 6.5e-82 308.9 472 46.4
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 8.8e-79 298.5 471 45.9
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 8.2e-77 292.0 453 46.6
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 8.5e-74 282.0 506 41.3
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 1.4e-68 264.6 481 43.7
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 1.3e-66 258.1 478 43.5
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 3.6e-64 250.0 458 42.4
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 8.0e-64 248.8 443 42.7
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 3.0e-63 246.9 453 40.4
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 4.0e-63 246.5 451 44.6
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 1.5e-62 244.6 427 43.3
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 4.8e-61 239.6 456 41.7
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 4.8e-61 239.6 459 41.6
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 8.2e-61 238.8 424 42.2
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.8e-60 237.7 431 42.5
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 5.3e-60 236.1 430 41.6
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 3.5e-59 233.4 449 41.4
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 4.5e-59 233.0 424 42.9
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 5.0e-58 229.6 425 40.2
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 3.2e-57 226.9 454 40.5
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.6e-56 224.6 456 40.4
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 1.8e-55 221.1 439 39.6
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 3.0e-55 220.3 488 37.7
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 4.0e-55 219.9 458 38.4
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 4.1e-52 209.9 439 41.7
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 9.1e-52 208.8 405 40.2
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 1.0e-50 205.3 454 35.9
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 6.5e-50 202.6 416 39.9
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 1.5e-49 201.4 454 38.8
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 4.0e-47 193.4 508 35.6
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 4.4e-46 189.9 506 35.2
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 2.8e-45 187.2 429 36.8
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 4.9e-45 186.4 455 37.8
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 6.3e-45 186.0 453 38.4
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 1.1e-44 185.3 481 34.3
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 3.6e-40 170.2 339 38.6
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 1.2e-38 165.2 436 34.6
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 5.7e-38 162.9 430 35.1
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 7.5e-38 162.5 336 41.1
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 7.5e-38 162.5 336 41.1
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 1.1e-36 158.7 457 33.3
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 1.2e-35 155.2 439 36.7
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 1.0e-34 152.1 235 43.4
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 1.0e-34 152.1 387 37.2
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 2.1e-32 144.4 428 36.0
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 4.7e-32 143.3 325 36.9
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.4e-31 141.7 531 29.8
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 2.3e-31 141.0 519 30.4
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 5.2e-31 139.8 242 41.7
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 2.9e-29 134.0 242 43.4
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 4.9e-29 133.3 403 32.5
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 1.9e-28 131.3 317 37.5
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 7.0e-28 129.4 491 30.5
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 2.7e-27 127.5 291 35.1
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 2.3e-26 124.4 379 34.6
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 6.6e-26 122.9 290 37.6
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 1.5e-25 121.7 275 37.8
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 2.8e-24 117.5 342 36.3
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 1.1e-23 115.5 551 29.4
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 1.2e-22 112.1 414 32.9
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 1.5e-22 111.7 490 29.0
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 3.4e-22 110.5 376 33.0
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 5.8e-22 109.8 255 35.3
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 1.7e-21 108.2 473 29.6
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 4.9e-21 106.7 429 34.0
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 9.2e-20 102.4 477 29.8
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 9.2e-20 102.4 423 28.8
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 1.3e-18 98.6 102 55.9
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 3.9e-18 97.1 422 29.6
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 5.1e-18 96.7 474 27.2
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 2.8e-16 90.9 504 26.6
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 1.2e-14 85.5 576 25.7
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 9.9e-14 82.4 399 31.1
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 2.4e-07 61.2 88 37.5


User provided reference genes

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