Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 1.9e-164 582.4 294 100.0
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 1.4e-146 523.1 294 90.1
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.3e-144 516.5 294 87.8
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 1.9e-143 512.7 295 87.8
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 5.1e-141 504.6 295 86.8
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 9.1e-138 493.8 284 87.7
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 9.1e-138 493.8 294 84.0
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 2.6e-137 492.3 296 82.8
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 6.5e-136 487.6 282 86.2
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 4.2e-135 485.0 289 84.8
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 4.2e-135 485.0 289 84.8
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 5.5e-135 484.6 295 82.4
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 1.6e-134 483.0 294 83.0
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 2.1e-134 482.6 294 83.7
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 2.7e-134 482.3 296 82.4
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 1.8e-133 479.6 296 81.8
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 3.9e-133 478.4 291 83.8
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 8.8e-133 477.2 295 82.0
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.5e-132 476.5 289 83.0
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 2.6e-132 475.7 292 81.8
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 5.3e-130 468.0 295 80.7
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 5.3e-130 468.0 295 79.7
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 7.0e-130 467.6 295 80.0
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 5.9e-129 464.5 300 78.7
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 7.7e-129 464.2 295 80.3
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 1.0e-128 463.8 295 78.3
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 1.0e-128 463.8 295 78.3
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 9.4e-127 457.2 278 83.8
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 1.6e-126 456.4 283 82.0
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 2.1e-126 456.1 300 77.3
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 3.0e-125 452.2 302 76.2
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 4.0e-125 451.8 295 78.0
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.0e-124 449.5 294 79.3
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 4.4e-124 448.4 293 77.8
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 1.3e-123 446.8 295 77.3
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 1.7e-123 446.4 302 75.8
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.7e-123 446.4 289 79.6
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.7e-123 446.4 295 76.9
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 6.3e-123 444.5 288 78.5
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 1.4e-122 443.4 292 77.7
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 2.4e-122 442.6 292 77.7
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 2.4e-122 442.6 292 77.7
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 5.3e-122 441.4 296 77.0
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 1.2e-121 440.3 301 74.1
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 1.2e-121 440.3 301 74.8
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 2.0e-121 439.5 292 76.7
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 2.7e-121 439.1 292 76.4
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 3.5e-121 438.7 292 77.4
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 1.3e-120 436.8 287 77.0
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 5.0e-120 434.9 300 75.3
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 1.9e-119 433.0 296 77.0
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 1.9e-119 433.0 298 75.5
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 4.2e-119 431.8 292 74.7
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 4.2e-119 431.8 292 75.0
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 4.2e-119 431.8 292 75.7
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 5.5e-119 431.4 292 75.7
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 1.2e-118 430.3 290 75.9
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 1.2e-118 430.3 293 75.8
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 1.6e-118 429.9 291 74.6
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 2.1e-118 429.5 298 75.2
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 4.7e-118 428.3 294 76.5
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 6.1e-118 427.9 292 76.0
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 6.1e-118 427.9 296 75.7
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 6.1e-118 427.9 292 73.6
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 8.0e-118 427.6 290 74.8
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 1.0e-117 427.2 292 75.3
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 1.0e-117 427.2 296 75.7
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 1.4e-117 426.8 290 75.2
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 1.8e-117 426.4 292 75.3
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 2.3e-117 426.0 292 75.3
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 2.3e-117 426.0 294 74.8
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 2.3e-117 426.0 294 74.8
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 4.0e-117 425.2 293 75.8
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 4.0e-117 425.2 293 75.8
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 4.0e-117 425.2 293 74.4
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 4.0e-117 425.2 292 75.7
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 4.0e-117 425.2 286 75.5
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 6.8e-117 424.5 293 75.4
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 6.8e-117 424.5 292 75.0
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 1.2e-116 423.7 293 75.1
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 1.2e-116 423.7 293 75.1
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 1.5e-116 423.3 292 74.7
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 2.0e-116 422.9 291 74.6
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 2.0e-116 422.9 300 73.3
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 3.4e-116 422.2 293 74.7
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 5.7e-116 421.4 291 74.9
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 5.7e-116 421.4 291 74.6
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 5.7e-116 421.4 292 74.0
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 7.5e-116 421.0 293 75.1
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 7.5e-116 421.0 291 74.6
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 7.5e-116 421.0 291 74.6
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 7.5e-116 421.0 292 75.3
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 9.8e-116 420.6 292 74.7
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.3e-115 420.2 291 74.6
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 1.3e-115 420.2 291 74.6
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 1.7e-115 419.9 292 74.0
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 1.7e-115 419.9 292 74.0
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 1.7e-115 419.9 292 74.0
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 2.2e-115 419.5 291 74.6
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.2e-115 419.5 291 74.2
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 2.2e-115 419.5 286 74.5
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 2.8e-115 419.1 293 74.7
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 2.8e-115 419.1 293 74.4
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 4.8e-115 418.3 291 73.9
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 8.3e-115 417.5 293 74.4
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 1.1e-114 417.2 293 74.4
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 1.1e-114 417.2 293 74.4
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 1.1e-114 417.2 295 73.2
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 1.4e-114 416.8 292 74.7
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 1.8e-114 416.4 286 73.4
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 2.4e-114 416.0 291 73.9
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.4e-114 416.0 291 73.9
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 3.1e-114 415.6 293 74.4
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 3.1e-114 415.6 293 74.4
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 4.1e-114 415.2 291 73.5
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 9.1e-114 414.1 294 71.1
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 1.2e-113 413.7 294 73.8
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 2.0e-113 412.9 290 72.4
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 2.7e-113 412.5 293 74.4
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 5.9e-113 411.4 300 68.3
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 7.7e-113 411.0 285 75.4
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 1.7e-112 409.8 294 73.1
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 2.9e-112 409.1 285 75.1
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 3.8e-112 408.7 289 72.3
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 5.0e-112 408.3 281 75.1
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 1.1e-111 407.1 295 72.5
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 3.0e-109 399.1 292 69.5
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.5e-108 396.7 285 74.0
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 2.6e-108 396.0 244 81.1
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 9.8e-108 394.0 292 71.2
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 2.8e-107 392.5 296 70.9
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 4.9e-107 391.7 307 66.4
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 1.2e-105 387.1 290 71.4
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 1.7e-104 383.3 287 68.3
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 7.3e-103 377.9 310 63.2
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 9.5e-103 377.5 306 65.4
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 1.2e-102 377.1 294 68.0
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.2e-102 377.1 294 69.0
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 2.1e-102 376.3 306 65.0
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 6.1e-102 374.8 295 67.8
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 2.7e-97 359.4 294 66.0
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 1.3e-96 357.1 296 65.5
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 5.2e-93 345.1 293 64.8
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 5.8e-92 341.7 263 67.3
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 1.6e-86 323.6 193 85.5
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 1.7e-83 313.5 281 59.8
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 5.8e-76 288.5 215 72.1
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 6.4e-75 285.0 281 55.5
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 8.4e-75 284.6 274 56.2
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 1.5e-71 273.9 276 55.8
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 4.0e-69 265.8 165 81.8
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 8.7e-64 248.1 281 49.1
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 9.9e-60 234.6 268 52.6
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 1.4e-58 230.7 136 83.1
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 9.6e-55 218.0 131 80.2
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 6.2e-54 215.3 144 76.4
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 1.2e-44 184.5 152 63.8
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 4.5e-28 129.4 103 64.1
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 1.7e-27 127.5 332 29.2
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 8.5e-27 125.2 114 59.6
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 6.1e-25 119.0 109 59.6
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 3.0e-24 116.7 85 72.9
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 7.4e-23 112.1 98 62.2
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 3.3e-15 86.7 72 61.1
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 2.6e-12 77.0 72 56.9
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 4.5e-12 76.3 86 55.8
SHI26932 Sapria himalayana HOM05D009124 ORTHO05D012381 1.8e-08 64.3 69 50.7


User provided reference genes

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