Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 1.4e-229 799.3 417 100.0
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 4.2e-181 638.3 405 85.9
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 9.5e-141 504.2 405 68.4
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 8.1e-132 474.6 413 63.9
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 2.3e-131 473.0 420 63.6
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 2.6e-130 469.5 407 64.9
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 3.4e-130 469.2 405 64.2
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 4.4e-130 468.8 429 62.7
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 5.8e-130 468.4 429 62.7
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 7.6e-130 468.0 405 66.2
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 7.6e-130 468.0 405 64.2
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 9.9e-130 467.6 407 62.9
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.9e-128 463.4 407 63.9
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.6e-127 460.3 407 62.9
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 1.6e-127 460.3 407 63.1
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 2.7e-127 459.5 411 62.3
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 2.3e-126 456.4 452 59.1
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 3.0e-126 456.1 405 62.5
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 6.2e-124 448.4 407 60.7
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 2.4e-123 446.4 407 61.4
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 8.9e-123 444.5 406 62.1
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 4.4e-122 442.2 407 60.2
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 5.8e-122 441.8 410 60.7
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 5.8e-122 441.8 407 60.4
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 7.6e-122 441.4 405 62.5
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 1.3e-121 440.7 410 61.5
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 2.2e-121 439.9 417 61.9
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 2.9e-121 439.5 376 64.9
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 3.2e-120 436.0 405 60.2
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 4.2e-120 435.6 407 58.5
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 4.2e-120 435.6 407 60.0
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 4.2e-120 435.6 407 60.4
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 7.1e-120 434.9 405 58.8
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 1.2e-119 434.1 410 61.5
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 1.6e-119 433.7 407 60.9
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 2.1e-119 433.3 407 60.0
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 2.1e-119 433.3 407 58.5
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 3.5e-119 432.6 408 59.6
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 7.8e-119 431.4 411 59.4
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 7.8e-119 431.4 407 58.5
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 2.3e-118 429.9 407 58.0
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 8.7e-118 427.9 407 59.2
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 6.2e-116 421.8 411 57.2
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 3.1e-115 419.5 417 59.0
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 5.3e-115 418.7 411 56.4
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 9.0e-115 417.9 410 57.3
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 1.2e-114 417.5 407 57.7
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 1.2e-114 417.5 408 58.6
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 3.4e-114 416.0 420 57.9
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 3.4e-114 416.0 409 58.7
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 9.9e-114 414.5 407 58.0
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 2.9e-113 412.9 420 57.1
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 1.4e-112 410.6 410 55.6
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 2.4e-112 409.8 406 56.4
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 3.5e-111 406.0 413 54.7
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 1.0e-110 404.4 422 55.2
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 5.1e-110 402.1 363 62.8
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 6.7e-110 401.7 414 55.8
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 1.5e-109 400.6 407 56.0
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 8.1e-108 394.8 405 55.8
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 4.0e-107 392.5 411 55.2
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 5.3e-107 392.1 411 54.5
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 5.3e-107 392.1 411 54.5
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 6.9e-107 391.7 435 54.0
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 2.0e-106 390.2 405 54.6
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 8.4e-105 384.8 407 55.5
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 1.4e-104 384.0 407 53.8
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 2.4e-104 383.3 431 52.9
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 1.6e-103 380.6 407 53.6
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 2.7e-103 379.8 408 53.7
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 4.6e-103 379.0 407 53.6
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.5e-101 373.2 407 54.8
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 7.4e-101 371.7 406 52.5
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 3.7e-100 369.4 405 52.6
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 8.2e-100 368.2 408 52.7
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 2.6e-98 363.2 406 51.5
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 1.0e-97 361.3 406 51.7
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 6.5e-97 358.6 406 51.2
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 8.4e-97 358.2 406 51.2
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 1.4e-96 357.5 415 51.3
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.4e-96 357.5 442 49.5
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 2.5e-96 356.7 401 51.1
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 4.2e-96 355.9 344 60.5
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 9.3e-96 354.8 412 51.7
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 6.0e-95 352.1 261 69.0
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 6.0e-95 352.1 261 69.0
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 1.6e-92 344.0 420 48.8
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 6.3e-92 342.0 377 52.3
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 2.4e-91 340.1 407 50.1
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 2.0e-90 337.0 408 50.2
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 5.9e-90 335.5 407 50.1
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 7.2e-88 328.6 346 56.1
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 7.2e-88 328.6 406 49.3
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 2.5e-85 320.1 406 46.6
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 5.5e-80 302.4 406 43.8
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 4.7e-71 272.7 195 70.3
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 2.0e-69 267.3 309 51.8
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 5.3e-67 259.2 368 47.6
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 3.5e-58 229.9 163 71.2
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 1.7e-52 211.1 164 64.6
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 1.4e-51 208.0 219 58.0
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 1.1e-48 198.4 412 34.2
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 2.8e-47 193.7 413 34.1
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 8.9e-46 188.7 210 54.3
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 3.7e-44 183.3 416 32.5
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 3.5e-42 176.8 210 51.0
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 1.8e-38 164.5 238 47.9
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 5.0e-33 146.4 212 44.8
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 2.3e-30 137.5 328 32.9
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 1.2e-29 135.2 306 36.3
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.3e-28 131.7 125 53.6
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 8.9e-22 109.0 108 58.3
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 1.7e-20 104.8 101 57.4
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 2.2e-20 104.4 96 59.4
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.8e-14 84.7 100 44.0
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 1.9e-11 74.7 64 64.1
Cre05.g246300 Chlamydomonas reinhardtii HOM05D005607 ORTHO05D008142 7.8e-10 69.3 216 27.8
SEGI_12563 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.4e-06 58.5 59 47.5
MELO3C033981.2 Cucumis melo HOM05D005607 ORTHO05D166899 1.8e-06 58.2 64 53.1
MELO3C030698.2 Cucumis melo HOM05D005607 ORTHO05D169846 3.1e-06 57.4 92 45.7
RcHm_v2.0_Chr1g0340011 Rosa chinensis HOM05D005607 ORTHO05D008142 5.2e-06 56.6 89 42.7


User provided reference genes

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