Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A831T70 Lonicera japonica HOM05D008293 ORTHO05D010504 1.5e-147 526.2 263 100.0
Dinv14981 Davidia involucrata HOM05D008293 ORTHO05D010504 2.6e-112 409.1 263 77.9
TAR627G0720 Trochodendron aralioides HOM05D008293 ORTHO05D010504 6.9e-105 384.4 255 76.5
Actinidia18798 Actinidia chinensis HOM05D008293 ORTHO05D010504 2.0e-104 382.9 260 75.8
Atru.chr2.2164 Acer truncatum HOM05D008293 ORTHO05D010504 7.7e-104 380.9 255 74.1
GSVIVG01014211001 Vitis vinifera HOM05D008293 ORTHO05D010504 2.2e-103 379.4 263 73.0
Hma1.2p1_2505F.1_g323420 Hydrangea macrophylla HOM05D008293 ORTHO05D010504 4.2e-102 375.2 257 72.8
QL08p026533 Quercus lobata HOM05D008293 ORTHO05D010504 7.2e-102 374.4 259 71.8
Rhsim04G0025400 Rhododendron simsii HOM05D008293 ORTHO05D010504 2.1e-101 372.9 255 74.5
CSS0000482 Camellia sinensis var. sinensis HOM05D008293 ORTHO05D010504 4.4e-99 365.2 256 73.4
PGSC0003DMG400012428 Solanum tuberosum HOM05D008293 ORTHO05D010504 8.2e-98 360.9 254 71.7
Thecc.07G109900 Theobroma cacao HOM05D008293 ORTHO05D010504 3.1e-97 359.0 263 67.7
Ciclev10020583m.g Citrus clementina HOM05D008293 ORTHO05D010504 4.1e-97 358.6 263 68.4
Sopen07g030780 Solanum pennellii HOM05D008293 ORTHO05D010504 4.1e-97 358.6 254 70.1
Nitab4.5_0000246g0170 Nicotiana tabacum HOM05D008293 ORTHO05D010504 9.1e-97 357.5 255 70.2
Nitab4.5_0001145g0060 Nicotiana tabacum HOM05D008293 ORTHO05D010504 1.0e-95 354.0 255 69.8
CAN.G162.9 Capsicum annuum HOM05D008293 ORTHO05D010504 3.8e-95 352.1 254 69.3
COL.COLO4_24863 Corchorus olitorius HOM05D008293 ORTHO05D010504 6.5e-95 351.3 259 67.6
Cc05_g11210 Coffea canephora HOM05D008293 ORTHO05D010504 3.2e-94 349.0 254 67.7
Prupe.4G167100 Prunus persica HOM05D008293 ORTHO05D010504 3.2e-94 349.0 259 68.7
Gohir.A13G148900 Gossypium hirsutum HOM05D008293 ORTHO05D010504 5.5e-94 348.2 255 68.2
Gohir.D13G153400 Gossypium hirsutum HOM05D008293 ORTHO05D010504 6.1e-93 344.7 262 65.6
CANSAT35G0405 Cannabis sativa HOM05D008293 ORTHO05D010504 7.9e-93 344.4 261 67.8
Peaxi162Scf00069g02232 Petunia axillaris HOM05D008293 ORTHO05D010504 1.8e-92 343.2 255 69.8
Gorai.013G173300 Gossypium raimondii HOM05D008293 ORTHO05D010504 3.0e-92 342.4 264 65.9
PSO782G2569 Papaver somniferum HOM05D008293 ORTHO05D010504 2.0e-91 339.7 256 66.8
Haze_09337 Corylus avellana HOM05D008293 ORTHO05D010504 4.4e-91 338.6 259 68.3
Migut.M00735 Erythranthe guttata HOM05D008293 ORTHO05D010504 1.1e-89 334.0 256 66.4
MD03G1241800 Malus domestica HOM05D008293 ORTHO05D010504 5.3e-89 331.6 250 67.6
Ciclev10023335m.g Citrus clementina HOM05D008293 ORTHO05D010504 8.5e-87 324.3 293 59.0
Aqoxy4G00368 Aquilegia oxysepala HOM05D008293 ORTHO05D010504 2.5e-86 322.8 254 64.6
HPP92_024759 Vanilla planifolia HOM05D008293 ORTHO05D010504 4.4e-83 312.0 255 58.8
PGR083G2613 Punica granatum HOM05D008293 ORTHO05D010504 5.7e-83 311.6 258 62.8
AagrBONN_evm.TU.Sc2ySwM_344.4932 Anthoceros agrestis HOM05D008293 ORTHO05D010504 2.2e-82 309.7 252 61.5
Pp3c19_10600 Physcomitrium patens HOM05D008293 ORTHO05D010504 2.1e-77 293.1 262 56.1
Pp3c22_22050 Physcomitrium patens HOM05D008293 ORTHO05D010504 4.0e-76 288.9 254 57.9
SEGI_20639 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 5.2e-76 288.5 262 57.3
SGA_v2.0_scaffold55G19705 Striga asiatica HOM05D008293 ORTHO05D010504 2.6e-75 286.2 257 59.5
RcHm_v2.0_Chr5g0030831 Rosa chinensis HOM05D008293 ORTHO05D010504 2.2e-74 283.1 255 57.3
SMO118G0404 Selaginella moellendorffii HOM05D008293 ORTHO05D010504 4.8e-74 282.0 254 57.5
Mapoly0032s0102 Marchantia polymorpha HOM05D008293 ORTHO05D010504 7.0e-73 278.1 262 54.6
Nn1g09105 Nelumbo nucifera HOM05D008293 ORTHO05D010504 6.5e-71 271.6 260 58.5
RcHm_v2.0_Chr7g0194341 Rosa chinensis HOM05D008293 ORTHO05D010504 1.1e-65 254.2 235 60.0
CBR_g40882 Chara braunii HOM05D008293 ORTHO05D010504 5.4e-65 251.9 244 53.7
Solyc07g062543.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 6.6e-63 245.0 170 69.4
Atru.chr2.2165 Acer truncatum HOM05D003516 ORTHO05D004068 1.9e-62 243.4 186 66.1
Cpa.g.sc97.100 Carica papaya HOM05D008293 ORTHO05D010504 4.3e-62 242.3 170 68.8
RcHm_v2.0_Chr5g0031411 Rosa chinensis HOM05D008293 ORTHO05D010504 4.0e-60 235.7 221 57.0
PRCOL_00003950 Prasinoderma coloniale HOM05D008293 ORTHO05D010504 1.2e-56 224.2 261 48.3
RcHm_v2.0_Chr5g0031211 Rosa chinensis HOM05D008293 ORTHO05D010504 2.0e-51 206.8 255 49.4
AagrBONN_evm.TU.Sc2ySwM_344.893 Anthoceros agrestis HOM05D008293 ORTHO05D010504 1.5e-38 164.1 144 59.0
MD10G1199100 Malus domestica HOM05D008293 ORTHO05D010504 1.9e-38 163.7 171 52.6
Ca_29048_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 2.7e-16 90.1 102 44.1
Ca_29004_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 1.0e-15 88.2 76 53.9
Sopen06g001050 Solanum pennellii HOM05D008293 ORTHO05D023155 1.9e-14 84.0 83 56.6
Actinidia35215 Actinidia chinensis HOM05D008293 ORTHO05D010504 3.7e-13 79.7 237 32.5


User provided reference genes

Program Settings