Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A82T80 Lonicera japonica HOM05D001336 ORTHO05D235213 3.5e-36 154.5 79 100.0
Dinv19224 Davidia involucrata HOM05D001336 ORTHO05D001211 1.5e-10 69.3 68 52.9
Hma1.2p1_1061F.1_g253280 Hydrangea macrophylla HOM05D001336 ORTHO05D001211 3.7e-09 64.7 60 58.3
MBI10_g09192_MAGBIO Magnolia biondii HOM05D001336 ORTHO05D001211 4.8e-09 64.3 68 47.1
Lj2A1134T24 Lonicera japonica HOM05D001336 ORTHO05D234891 1.4e-08 62.8 61 57.4
Nitab4.5_0001740g0020 Nicotiana tabacum HOM05D001336 ORTHO05D001211 1.4e-08 62.8 67 52.2
Actinidia30095 Actinidia chinensis HOM05D001336 ORTHO05D001211 2.4e-08 62.0 80 50.0
Ca_20014_v3 Cicer arietinum L. HOM05D001336 ORTHO05D001211 2.4e-08 62.0 71 49.3
Ca_29684_v3 Cicer arietinum L. HOM05D001336 ORTHO05D001211 2.4e-08 62.0 71 49.3
DCAR_004710 Daucus carota HOM05D001336 ORTHO05D001211 3.1e-08 61.6 68 47.1
Psat7g232480 Pisum sativum HOM05D001336 ORTHO05D001211 3.1e-08 61.6 71 47.9
Lj3g0009715 Lotus japonicus HOM05D001336 ORTHO05D001211 4.0e-08 61.2 71 49.3
MBI07_g19558_MAGBIO Magnolia biondii HOM05D001336 ORTHO05D001211 4.0e-08 61.2 70 45.7
CSS0032998 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 5.3e-08 60.8 64 53.1
Lalb_Chr12g0209611 Lupinus albus HOM05D001336 ORTHO05D001211 5.3e-08 60.8 68 48.5
GSVIVG01028556001 Vitis vinifera HOM05D001336 ORTHO05D001211 5.3e-08 60.8 69 52.2
SalBow2G3184 Salvia bowleyana HOM05D001336 ORTHO05D001211 6.9e-08 60.5 71 49.3
Oeu018506.1 Olea europaea HOM05D001336 ORTHO05D001211 9.0e-08 60.1 70 50.0
TPR.G5601 Trifolium pratense HOM05D001336 ORTHO05D001211 9.0e-08 60.1 68 45.6
Glyma.03G083100 Glycine max HOM05D001336 ORTHO05D001211 1.5e-07 59.3 68 47.1
SGA_v2.0_scaffold1G00712 Striga asiatica HOM05D001336 ORTHO05D001211 2.6e-07 58.5 67 49.3
CANSAT01G3031 Cannabis sativa HOM05D001336 ORTHO05D001211 4.5e-07 57.8 69 47.8
CAN.G941.42 Capsicum annuum HOM05D001336 ORTHO05D001211 7.6e-07 57.0 68 48.5
TAR228G0003 Trochodendron aralioides HOM05D001336 ORTHO05D001211 7.6e-07 57.0 68 47.1
vmacro02743 Vaccinium macrocarpon HOM05D001336 ORTHO05D001211 7.6e-07 57.0 61 52.5
MSTRG.12500 Avicennia marina HOM05D001336 ORTHO05D001211 9.9e-07 56.6 62 50.0
Atru.chr5.1980 Acer truncatum HOM05D001336 ORTHO05D001211 1.3e-06 56.2 64 50.0
Phvul.010G013800 Phaseolus vulgaris HOM05D001336 ORTHO05D001211 1.3e-06 56.2 71 43.7
Medtr4g022580 Medicago truncatula HOM05D001336 ORTHO05D001211 1.7e-06 55.8 71 45.1
Migut.D00517 Erythranthe guttata HOM05D001336 ORTHO05D001211 2.2e-06 55.5 69 49.3
PGR083G0543 Punica granatum HOM05D001336 ORTHO05D001211 2.2e-06 55.5 67 43.3
QL09p044550 Quercus lobata HOM05D001336 ORTHO05D001211 2.2e-06 55.5 68 50.0
TWI31G1246 Tripterygium wilfordii HOM05D001336 ORTHO05D001211 2.2e-06 55.5 67 50.7
Lalb_Chr07g0193971 Lupinus albus HOM05D001336 ORTHO05D001211 6.4e-06 53.9 68 41.2
Cc01_g17300 Coffea canephora HOM05D001336 ORTHO05D001211 8.4e-06 53.5 67 49.3
Sc05g0002370 Simmondsia chinensis HOM05D001336 ORTHO05D001211 8.4e-06 53.5 64 48.4


User provided reference genes

Program Settings