Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 5.0e-268 927.2 460 100.0
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 7.9e-221 770.4 461 82.2
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 3.8e-215 751.5 457 80.1
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 2.1e-213 745.7 460 78.7
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 4.6e-213 744.6 460 78.7
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 7.9e-213 743.8 460 78.7
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 1.3e-212 743.0 460 78.3
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 6.7e-212 740.7 460 78.9
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 3.3e-211 738.4 460 78.3
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 1.6e-210 736.1 456 78.3
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 2.4e-209 732.3 460 77.0
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 1.5e-208 729.6 457 77.2
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 1.0e-207 726.9 457 75.3
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 4.9e-207 724.5 460 78.7
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 6.0e-205 717.6 460 77.6
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 1.8e-204 716.1 462 74.7
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 1.1e-203 713.4 460 76.1
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 9.6e-203 710.3 459 74.9
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 3.7e-202 708.4 476 74.8
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 6.3e-202 707.6 460 73.0
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 9.0e-201 703.7 462 76.4
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 7.6e-200 700.7 457 73.1
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 1.3e-199 699.9 464 74.1
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 2.2e-199 699.1 456 75.2
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 3.8e-199 698.4 462 74.5
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 3.8e-199 698.4 461 73.5
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 6.5e-199 697.6 461 74.6
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 1.1e-198 696.8 462 74.2
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 1.1e-198 696.8 455 74.7
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 1.4e-198 696.4 474 72.2
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 3.2e-198 695.3 445 75.5
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 3.2e-198 695.3 457 72.9
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 5.5e-198 694.5 460 73.3
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 1.6e-197 693.0 458 73.8
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 1.6e-197 693.0 460 72.6
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 4.6e-197 691.4 471 73.0
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 7.9e-197 690.6 457 72.6
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 3.9e-196 688.3 458 73.6
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 5.1e-196 688.0 457 74.6
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 8.7e-196 687.2 457 74.4
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 2.5e-195 685.6 457 74.2
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 3.3e-195 685.3 466 71.2
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 5.7e-195 684.5 463 69.8
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 9.7e-195 683.7 459 72.3
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 1.6e-194 682.9 475 70.9
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 1.6e-194 682.9 463 70.4
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 2.8e-194 682.2 464 69.2
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 8.2e-194 680.6 451 72.3
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 1.1e-193 680.2 461 71.4
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 1.4e-193 679.9 456 72.4
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 1.8e-193 679.5 472 72.0
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 9.0e-193 677.2 459 69.7
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 9.0e-193 677.2 457 71.8
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 2.0e-192 676.0 455 73.8
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 2.6e-192 675.6 463 69.5
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.2e-191 672.5 462 72.7
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 6.5e-191 671.0 458 71.2
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 9.4e-190 667.2 463 69.5
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 1.6e-189 666.4 460 70.9
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 1.6e-189 666.4 459 68.8
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 2.7e-189 665.6 461 70.7
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 2.7e-189 665.6 461 70.3
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 3.0e-188 662.1 461 69.4
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 3.9e-188 661.8 461 68.8
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 8.8e-188 660.6 463 69.5
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 1.5e-187 659.8 461 69.4
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 1.5e-187 659.8 461 69.6
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 5.7e-187 657.9 463 69.3
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 5.7e-187 657.9 461 69.4
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 2.2e-186 656.0 468 69.0
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 2.8e-186 655.6 460 67.8
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 6.3e-186 654.4 461 69.6
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 6.9e-185 651.0 461 67.9
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 2.0e-184 649.4 455 69.9
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 2.0e-184 649.4 455 69.9
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 2.0e-184 649.4 455 69.9
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 5.9e-184 647.9 502 63.7
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 1.7e-183 646.4 452 69.9
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 9.4e-182 640.6 460 70.4
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 7.9e-181 637.5 426 73.7
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 7.9e-181 637.5 464 65.7
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 1.5e-179 633.3 457 70.0
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 7.4e-179 630.9 502 62.7
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 6.3e-178 627.9 459 66.0
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 7.2e-174 614.4 444 67.8
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 8.8e-172 607.4 453 65.1
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 8.8e-172 607.4 400 72.0
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 4.4e-171 605.1 399 72.7
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.3e-167 593.6 460 65.4
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.7e-167 593.2 474 65.6
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 1.2e-163 580.5 426 67.6
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 3.7e-162 575.5 460 63.9
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 2.9e-159 565.8 411 66.2
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 2.6e-155 552.7 466 60.7
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 2.3e-151 539.7 466 60.9
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 2.1e-149 533.1 456 59.6
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 2.0e-139 500.0 311 78.5
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 8.6e-135 484.6 449 54.3
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 1.2e-133 480.7 339 67.6
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 2.9e-130 469.5 421 60.3
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 4.0e-124 449.1 281 75.4
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 5.2e-124 448.7 298 75.2
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 8.4e-114 414.8 303 65.7
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.3e-109 401.0 335 64.5
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 3.2e-105 386.3 348 60.3
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 3.1e-100 369.8 417 46.5
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 9.0e-100 368.2 457 45.1
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 1.2e-91 341.3 464 41.2
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 2.6e-91 340.1 381 50.4
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 2.9e-90 336.7 451 45.2
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 1.0e-87 328.2 457 44.6
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 1.1e-86 324.7 457 41.1
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 6.3e-85 318.9 302 57.6
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 3.1e-84 316.6 227 62.6
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 7.9e-80 302.0 233 64.4
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 2.2e-77 293.9 247 64.0
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 3.7e-69 266.5 256 50.0
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 2.7e-64 250.4 164 68.9
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 2.3e-55 220.7 160 64.4
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 3.0e-47 193.7 130 73.1
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 3.4e-46 190.3 161 65.2
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 9.5e-41 172.2 128 70.3
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 3.4e-38 163.7 121 62.8
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 1.2e-35 155.2 113 64.6
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 1.2e-35 155.2 118 61.0
Psat2g113040 Pisum sativum HOM05D000718 ORTHO05D004709 7.0e-28 129.4 102 65.7
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 6.2e-24 116.3 109 54.1
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 4.6e-19 100.1 103 49.5
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 1.3e-18 98.6 321 26.8
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 6.2e-16 89.7 52 82.7
Thecc.07G113800 Theobroma cacao HOM05D000718 ORTHO05D007431 1.7e-13 81.6 63 66.7
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 4.9e-13 80.1 54 75.9


User provided reference genes

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