Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 5.4e-155 551.2 330 100.0
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.6e-61 240.7 322 49.1
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 4.5e-61 239.2 326 50.0
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.9e-60 236.5 324 48.8
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 9.4e-59 231.5 324 48.1
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 1.6e-58 230.7 320 49.1
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 2.1e-58 230.3 322 48.4
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 8.0e-58 228.4 320 48.8
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 2.6e-56 223.4 309 48.5
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 3.7e-55 219.5 320 48.4
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 1.4e-54 217.6 320 47.8
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 1.6e-53 214.2 340 45.0
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 3.5e-53 213.0 336 46.1
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 3.2e-51 206.5 327 46.2
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 5.5e-51 205.7 320 46.9
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 3.6e-50 203.0 339 43.4
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 1.4e-49 201.1 316 45.9
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 6.8e-49 198.7 335 44.8
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 2.6e-48 196.8 331 44.4
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 1.3e-47 194.5 332 44.6
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 2.8e-47 193.4 319 45.1
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 4.9e-47 192.6 354 42.1
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 3.1e-46 189.9 342 43.9
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 4.1e-46 189.5 317 45.1
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.0e-45 187.2 298 44.3
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 4.5e-45 186.0 330 42.7
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 5.9e-45 185.7 323 42.7
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 5.9e-45 185.7 373 41.3
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 1.0e-44 184.9 321 45.5
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 1.0e-44 184.9 356 42.4
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.9e-44 183.3 314 43.9
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 6.6e-44 182.2 323 43.3
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 6.6e-44 182.2 322 46.0
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 8.6e-44 181.8 322 42.5
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.1e-43 181.4 314 43.6
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 2.5e-43 180.3 323 42.7
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 4.2e-43 179.5 348 40.8
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 7.2e-43 178.7 343 40.5
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 1.6e-42 177.6 321 47.4
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 6.1e-42 175.6 316 44.0
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 8.0e-42 175.3 306 42.2
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 1.8e-41 174.1 339 40.1
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 2.3e-41 173.7 347 42.1
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 2.3e-41 173.7 295 43.4
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 3.0e-41 173.3 318 41.8
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 3.0e-41 173.3 311 42.1
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 6.8e-41 172.2 338 41.1
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 6.8e-41 172.2 320 44.1
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 8.9e-41 171.8 320 41.2
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 8.9e-41 171.8 304 41.4
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 2.6e-40 170.2 316 46.2
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 3.4e-40 169.9 343 39.7
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 5.7e-40 169.1 271 46.5
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 7.5e-40 168.7 326 41.1
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 7.5e-40 168.7 311 41.5
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 9.8e-40 168.3 331 45.3
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 9.8e-40 168.3 349 42.4
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 1.7e-39 167.5 329 41.3
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 2.9e-39 166.8 308 42.5
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.7e-39 166.4 320 40.6
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 6.3e-39 165.6 320 43.4
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 6.3e-39 165.6 341 40.2
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 1.4e-38 164.5 325 42.5
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 2.4e-38 163.7 298 42.3
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 2.4e-38 163.7 321 40.5
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 3.2e-38 163.3 315 41.9
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 3.2e-38 163.3 325 40.9
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 4.1e-38 162.9 282 42.6
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 3.5e-37 159.8 313 44.1
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 3.5e-37 159.8 337 41.8
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 4.6e-37 159.5 314 41.1
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 5.9e-37 159.1 283 44.2
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 5.9e-37 159.1 323 42.1
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 7.8e-37 158.7 329 41.3
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 1.3e-36 157.9 318 44.0
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 1.7e-36 157.5 336 39.9
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 2.9e-36 156.8 313 40.6
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 3.9e-36 156.4 338 38.8
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 3.9e-36 156.4 354 36.7
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 5.0e-36 156.0 317 39.7
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 5.0e-36 156.0 315 41.6
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 1.9e-35 154.1 304 44.1
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 7.3e-35 152.1 324 39.8
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 9.5e-35 151.8 209 49.8
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 2.8e-34 150.2 336 38.7
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 3.6e-34 149.8 320 39.4
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 4.7e-34 149.4 304 39.5
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 1.0e-33 148.3 318 37.7
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 1.0e-33 148.3 318 37.7
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 1.8e-33 147.5 312 39.7
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 5.2e-33 146.0 338 38.2
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 1.5e-32 144.4 320 37.8
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 3.4e-32 143.3 316 38.9
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 3.4e-32 143.3 321 38.0
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 1.3e-31 141.4 208 45.7
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 3.7e-31 139.8 335 36.7
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 6.4e-31 139.0 169 53.3
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 1.9e-30 137.5 295 38.3
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 2.4e-30 137.1 309 42.1
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 7.0e-30 135.6 328 36.0
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 1.2e-29 134.8 328 40.2
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 1.6e-29 134.4 217 43.8
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.6e-29 134.4 270 41.5
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 2.7e-29 133.7 237 41.4
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 3.5e-29 133.3 234 41.9
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 4.6e-29 132.9 328 39.9
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 7.8e-29 132.1 330 38.2
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 7.8e-29 132.1 379 38.3
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 1.0e-28 131.7 338 39.6
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 3.0e-28 130.2 328 39.3
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 1.7e-23 114.4 167 46.1
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 2.2e-23 114.0 330 34.5
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 1.4e-22 111.3 169 45.0
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 2.4e-22 110.5 311 34.1
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.2e-22 110.2 310 35.8
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 7.1e-22 109.0 306 34.3
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 7.1e-22 109.0 319 33.9
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 7.1e-22 109.0 351 36.2
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 2.7e-21 107.1 251 35.9
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 1.3e-20 104.8 352 32.1
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.7e-20 104.4 189 40.7
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 3.0e-20 103.6 283 36.7
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 1.5e-19 101.3 140 48.6
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 1.4e-17 94.7 210 36.7
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 8.4e-15 85.5 207 34.8
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 1.4e-14 84.7 284 32.7
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 1.4e-14 84.7 196 35.2
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 3.9e-12 76.6 69 60.9
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 8.1e-10 68.9 48 77.1
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 2.0e-08 64.3 84 47.6
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 2.2e-07 60.8 76 47.4


User provided reference genes

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