Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 7.8e-108 394.0 235 100.0
Lj1A798T44 Lonicera japonica HOM05D011954 ORTHO05D014236 6.9e-64 248.1 163 73.6
Lj1A748T28 Lonicera japonica HOM05D011954 ORTHO05D014236 3.4e-26 122.9 199 38.7
Lj1A786G23 Lonicera japonica HOM05D011954 ORTHO05D014236 2.3e-19 100.1 129 42.6
Lj1A773T40 Lonicera japonica HOM05D011954 ORTHO05D014236 4.0e-19 99.4 132 44.7
Lj1A777T20 Lonicera japonica HOM05D011954 ORTHO05D014236 5.2e-19 99.0 132 43.9
Lj1A778T39 Lonicera japonica HOM05D011954 ORTHO05D014236 8.9e-19 98.2 132 44.7
Lj1A363G10 Lonicera japonica HOM05D011954 ORTHO05D014236 2.6e-18 96.7 154 37.0
Lj1A773T41 Lonicera japonica HOM05D011954 ORTHO05D014236 9.8e-18 94.7 118 45.8
Lju4319C0T1 Lonicera japonica HOM05D011954 ORTHO05D014236 9.2e-16 88.2 132 39.4
Lj1A771T10 Lonicera japonica HOM05D011954 ORTHO05D014236 7.8e-15 85.1 121 41.3
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 1.1e-13 81.3 123 39.8
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 1.9e-13 80.5 122 40.2
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 4.3e-13 79.3 147 36.1
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 9.5e-13 78.2 147 34.7
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.2e-12 77.8 147 35.4
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.8e-11 73.9 110 37.3
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.1e-11 73.2 127 38.6
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 5.2e-11 72.4 110 38.2
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.5e-10 70.9 125 36.0
Sed0020637 Sechium edule HOM05D008623 ORTHO05D007789 1.3e-09 67.8 109 40.4
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-09 67.4 169 32.5
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.2e-09 67.0 92 34.8
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 3.7e-09 66.2 127 36.2
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.7e-09 66.2 106 37.7
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 3.7e-09 66.2 130 33.8
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 4.9e-09 65.9 130 31.5
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 4.9e-09 65.9 119 37.0
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 8.3e-09 65.1 130 30.8
Rhsim12G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.4e-08 63.5 126 34.1
Sed0026611 Sechium edule HOM05D008623 ORTHO05D007789 2.4e-08 63.5 106 37.7
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 3.2e-08 63.2 127 34.6
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 3.2e-08 63.2 127 34.6
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.1e-08 62.8 111 35.1
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 9.2e-08 61.6 127 34.6
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 1.2e-07 61.2 137 33.6
Lj1A777G14 Lonicera japonica HOM05D011954 ORTHO05D014236 1.6e-07 60.8 118 35.6
arahy.Tifrunner.gnm1.ann1.52E6WN Arachis hypogaea HOM05D010841 ORTHO05D007789 2.0e-07 60.5 116 34.5
arahy.Tifrunner.gnm1.ann1.E31NWF Arachis hypogaea HOM05D010841 ORTHO05D007789 2.0e-07 60.5 96 37.5
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.0e-07 60.5 124 34.7
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 2.7e-07 60.1 146 30.8
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 2.7e-07 60.1 127 34.6
Sed0023023 Sechium edule HOM05D008623 ORTHO05D007789 2.7e-07 60.1 133 35.3
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 2.7e-07 60.1 109 33.9
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 2.7e-07 60.1 109 33.9
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.5e-07 59.7 135 31.9
arahy.Tifrunner.gnm1.ann1.B6M36H Arachis hypogaea HOM05D010841 ORTHO05D007789 3.5e-07 59.7 126 33.3
Rhsim10G0207200 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.5e-07 59.7 154 29.2
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 4.6e-07 59.3 123 35.8
Rhsim09G0029000 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.6e-07 59.3 136 30.1
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.0e-07 58.9 80 40.0
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 7.8e-07 58.5 129 31.0
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 7.8e-07 58.5 129 31.0
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-06 57.4 111 33.3
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-06 57.4 111 34.2
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-06 57.4 111 33.3
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 2.3e-06 57.0 129 30.2
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 2.3e-06 57.0 129 30.2
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.3e-06 57.0 111 33.3
Rhsim08G0153800 Rhododendron simsii HOM05D042119 ORTHO05D007789 3.0e-06 56.6 139 35.3
arahy.Tifrunner.gnm1.ann1.JW8DXZ Arachis hypogaea HOM05D010841 ORTHO05D007789 3.9e-06 56.2 122 32.0
Rhsim06G0172100 Rhododendron simsii HOM05D000032 ORTHO05D009914 3.9e-06 56.2 131 30.5
arahy.Tifrunner.gnm1.ann1.J4CNX7 Arachis hypogaea HOM05D010841 ORTHO05D007789 5.0e-06 55.8 121 35.5
Cc02_g13970 Coffea canephora HOM05D039367 ORTHO05D010647 5.0e-06 55.8 129 31.0
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 8.6e-06 55.1 127 33.9


User provided reference genes

Program Settings