Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A781G48 Lonicera japonica HOM05D005385 ORTHO05D006768 3.6e-67 258.1 126 100.0
Lj1A770T48 Lonicera japonica HOM05D005385 ORTHO05D006768 3.7e-48 194.9 112 84.8
Lju4319C0G3 Lonicera japonica HOM05D024127 ORTHO05D006768 2.1e-22 109.4 52 100.0
CSS0010990 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 3.5e-22 108.6 110 52.7
CSS0011006 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 6.0e-22 107.8 107 54.2
Dinv39728 Davidia involucrata HOM05D005385 ORTHO05D006768 1.1e-20 103.6 107 54.2
Dinv08748 Davidia involucrata HOM05D005385 ORTHO05D006768 2.1e-19 99.4 107 51.4
Rhsim06G0165400 Rhododendron simsii HOM05D005385 ORTHO05D006768 2.6e-17 92.4 110 46.4
GSVIVG01030472001 Vitis vinifera HOM05D005385 ORTHO05D006768 5.8e-17 91.3 110 43.6
CiPaw.03G158000 Carya illinoinensis HOM05D005385 ORTHO05D006768 1.7e-16 89.7 110 41.8
vmacro12184 Vaccinium macrocarpon HOM05D005385 ORTHO05D006768 2.9e-16 89.0 110 46.4
Lj8A127T46 Lonicera japonica HOM05D005385 ORTHO05D006768 3.8e-16 88.6 132 40.9
Haze_12803 Corylus avellana HOM05D005385 ORTHO05D006768 8.4e-16 87.4 110 42.7
Sabra02G0173800 Salix brachista HOM05D005385 ORTHO05D006768 1.9e-15 86.3 108 45.4
Actinidia09739 Actinidia chinensis HOM05D005385 ORTHO05D006768 2.4e-15 85.9 108 45.4
Potri.002G227200 Populus trichocarpa HOM05D005385 ORTHO05D006768 2.4e-15 85.9 108 44.4
Cfa014342 Carpinus fangiana HOM05D005385 ORTHO05D006768 2.1e-14 82.8 110 40.9
Rhsim06G0165100 Rhododendron simsii HOM05D005385 ORTHO05D006768 2.1e-14 82.8 111 44.1
CSS0039058 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 3.9e-13 78.6 70 57.1
TAR627G0869 Trochodendron aralioides HOM05D005385 ORTHO05D006768 3.9e-13 78.6 104 39.4
Cc05_g03620 Coffea canephora HOM05D005385 ORTHO05D006768 1.1e-12 77.0 129 34.9
QL08p031674 Quercus lobata HOM05D005385 ORTHO05D006768 1.9e-12 76.3 105 41.9
Oeu036745.2 Olea europaea HOM05D005385 ORTHO05D006768 2.5e-12 75.9 127 39.4
Migut.H01229 Erythranthe guttata HOM05D005385 ORTHO05D006768 5.3e-10 68.2 100 39.0
Sed0009256 Sechium edule HOM05D005385 ORTHO05D006768 5.3e-10 68.2 117 34.2
Manes.12G072400 Manihot esculenta HOM05D005385 ORTHO05D006768 1.2e-09 67.0 98 39.8
SalBow1G8666 Salvia bowleyana HOM05D005385 ORTHO05D006768 1.2e-09 67.0 128 37.5
SalBow1G7937 Salvia bowleyana HOM05D005385 ORTHO05D006768 3.4e-09 65.5 100 41.0
Sopen07g025370 Solanum pennellii HOM05D005385 ORTHO05D006768 4.5e-09 65.1 99 36.4
Prupe.3G214000 Prunus persica HOM05D005385 ORTHO05D006768 5.8e-09 64.7 132 35.6
MBI14_g48057_MAGBIO Magnolia biondii HOM05D005385 ORTHO05D006768 7.6e-09 64.3 120 31.7
Glyma.18G128300 Glycine max HOM05D005385 ORTHO05D006768 9.9e-09 63.9 93 37.6
Solyc07g049750.3 Solanum lycopersicum HOM05D005385 ORTHO05D006768 1.3e-08 63.5 97 33.0
PGSC0003DMG400001080 Solanum tuberosum HOM05D005385 ORTHO05D006768 1.7e-08 63.2 84 38.1
Eucgr.K00777 Eucalyptus grandis HOM05D005385 ORTHO05D006768 2.2e-08 62.8 110 37.3
DCAR_021158 Daucus carota HOM05D005385 ORTHO05D006768 2.9e-08 62.4 115 35.7
Ca_22840_v3 Cicer arietinum L. HOM05D005385 ORTHO05D006768 3.8e-08 62.0 95 36.8
TWI36G1417 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 3.8e-08 62.0 130 33.1
CANSAT64G0851 Cannabis sativa HOM05D005385 ORTHO05D006768 4.9e-08 61.6 109 37.6
VMungo0251G0036 Vigna mungo HOM05D005385 ORTHO05D006768 4.9e-08 61.6 96 35.4
PGR142G3338 Punica granatum HOM05D005385 ORTHO05D006768 6.4e-08 61.2 109 34.9
Psat4g129200 Pisum sativum HOM05D005385 ORTHO05D006768 1.1e-07 60.5 95 36.8
Rhsim06G0164700 Rhododendron simsii HOM05D005385 ORTHO05D006768 1.4e-07 60.1 77 40.3
RhsimUnG0010700 Rhododendron simsii HOM05D005385 ORTHO05D006768 1.4e-07 60.1 77 40.3
Sc21g0001240 Simmondsia chinensis HOM05D005385 ORTHO05D006768 1.4e-07 60.1 112 33.0
ClCG02G009040 Citrullus lanatus HOM05D005385 ORTHO05D006768 1.9e-07 59.7 110 31.8
Sed0009527 Sechium edule HOM05D005385 ORTHO05D006768 1.9e-07 59.7 114 36.0
TWI75G1493 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 4.2e-07 58.5 129 31.8
Glyma.08G294700 Glycine max HOM05D005385 ORTHO05D006768 5.5e-07 58.2 92 34.8
MELO3C019298.2 Cucumis melo HOM05D005385 ORTHO05D006768 3.5e-06 55.5 98 33.7


User provided reference genes

Program Settings