Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A771T12 Lonicera japonica HOM05D024127 ORTHO05D025733 4.1e-101 371.3 176 100.0
Lj1C781T10 Lonicera japonica HOM05D024127 ORTHO05D025733 6.8e-32 141.4 103 62.1
Lju4319A0G11 Lonicera japonica HOM05D024127 ORTHO05D025733 1.7e-14 83.6 48 75.0
Lj1C777T9 Lonicera japonica HOM05D024127 ORTHO05D025733 8.4e-14 81.3 145 35.9
Lj2C1057T15 Lonicera japonica HOM05D004887 ORTHO05D006168 1.6e-09 67.0 36 83.3
Dinv03548 Davidia involucrata HOM05D004887 ORTHO05D006168 3.1e-08 62.8 35 80.0
Lj1A157T41 Lonicera japonica HOM05D004887 ORTHO05D006168 6.9e-08 61.6 39 71.8
Hma1.2p1_0624F.1_g191380 Hydrangea macrophylla HOM05D004887 ORTHO05D006168 1.2e-07 60.8 36 72.2
MBI14_g18541_MAGBIO Magnolia biondii HOM05D004887 ORTHO05D006168 2.0e-07 60.1 42 61.9
MELO3C020709.2 Cucumis melo HOM05D004887 ORTHO05D006168 3.4e-07 59.3 35 71.4
CsaV3_1G033620 Cucumis sativus L. HOM05D004887 ORTHO05D006168 3.4e-07 59.3 35 71.4
Migut.D02114 Erythranthe guttata HOM05D004887 ORTHO05D006168 3.4e-07 59.3 37 67.6
Migut.G01105 Erythranthe guttata HOM05D004887 ORTHO05D006168 3.4e-07 59.3 37 67.6
Migut.G01142 Erythranthe guttata HOM05D004887 ORTHO05D006168 3.4e-07 59.3 37 67.6
Sed0009981 Sechium edule HOM05D004887 ORTHO05D006168 3.4e-07 59.3 35 71.4
Dinv32870 Davidia involucrata HOM05D004887 ORTHO05D006168 4.5e-07 58.9 36 72.2
SalBow3G3342 Salvia bowleyana HOM05D004887 ORTHO05D006168 4.5e-07 58.9 66 42.4
Haze_24049 Corylus avellana HOM05D004887 ORTHO05D006168 5.8e-07 58.5 46 58.7
HanXRQChr05g0134321 Helianthus annuus HOM05D004887 ORTHO05D025733 5.8e-07 58.5 38 68.4
Oeu041027.1 Olea europaea HOM05D004887 ORTHO05D006168 5.8e-07 58.5 37 64.9
TAR369G0226 Trochodendron aralioides HOM05D004887 ORTHO05D006168 5.8e-07 58.5 47 59.6
Cfa011464 Carpinus fangiana HOM05D004887 ORTHO05D006168 7.6e-07 58.2 35 71.4
DCAR_018895 Daucus carota HOM05D004887 ORTHO05D006168 7.6e-07 58.2 47 53.2
FvH4_3g35470 Fragaria vesca HOM05D004887 ORTHO05D006168 7.6e-07 58.2 36 72.2
FAN11G2539 Fragaria x ananassa HOM05D004887 ORTHO05D006168 7.6e-07 58.2 36 72.2
FAN16G2077 Fragaria x ananassa HOM05D001446 ORTHO05D001360 7.6e-07 58.2 36 72.2
FAN21G1310 Fragaria x ananassa HOM05D004887 ORTHO05D006168 7.6e-07 58.2 36 72.2
FAN25G2556 Fragaria x ananassa HOM05D004887 ORTHO05D006168 7.6e-07 58.2 36 72.2
Nitab4.5_0000610g0150 Nicotiana tabacum HOM05D004887 ORTHO05D006168 7.6e-07 58.2 35 68.6
Peaxi162Scf00406g00137 Petunia axillaris HOM05D004887 ORTHO05D006168 7.6e-07 58.2 35 71.4
Sabra16G0142900 Salix brachista HOM05D001446 ORTHO05D001360 7.6e-07 58.2 91 39.6
ClCG03G001950 Citrullus lanatus HOM05D004887 ORTHO05D006168 9.9e-07 57.8 79 41.8
Lju4319C0G3 Lonicera japonica HOM05D024127 ORTHO05D006768 9.9e-07 57.8 55 49.1
HanXRQChr04g0107001 Helianthus annuus HOM05D004887 ORTHO05D006168 1.3e-06 57.4 36 63.9
CSS0048955 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 1.7e-06 57.0 42 61.9
CANSAT54G1644 Cannabis sativa HOM05D004887 ORTHO05D006168 1.7e-06 57.0 36 72.2
Nitab4.5_0003782g0060 Nicotiana tabacum HOM05D004887 ORTHO05D006168 1.7e-06 57.0 35 68.6
Potri.001G237000 Populus trichocarpa HOM05D004887 ORTHO05D006168 1.7e-06 57.0 37 67.6
Actinidia07046 Actinidia chinensis HOM05D004887 ORTHO05D006168 2.2e-06 56.6 36 69.4
RcHm_v2.0_Chr5g0063631 Rosa chinensis HOM05D004887 ORTHO05D006168 2.2e-06 56.6 37 67.6
TAR623G0510 Trochodendron aralioides HOM05D004887 ORTHO05D006168 2.2e-06 56.6 36 69.4
Atru.chr3.3838 Acer truncatum HOM05D004887 ORTHO05D006168 2.9e-06 56.2 37 67.6
Migut.N02667 Erythranthe guttata HOM05D004887 ORTHO05D006168 2.9e-06 56.2 37 64.9
EL10Ac7g15978 Beta vulgaris HOM05D004887 ORTHO05D006168 3.8e-06 55.8 37 64.9
CiPaw.13G097700 Carya illinoinensis HOM05D004887 ORTHO05D006168 3.8e-06 55.8 43 55.8
Eucgr.B02388 Eucalyptus grandis HOM05D004887 ORTHO05D006168 3.8e-06 55.8 48 56.2
THA.LOC104810819 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 3.8e-06 55.8 37 64.9
HanXRQChr06g0175771 Helianthus annuus HOM05D004887 ORTHO05D006168 4.9e-06 55.5 35 65.7
Lsat_1_v5_gn_9_22360 Lactuca sativa HOM05D004887 ORTHO05D006168 4.9e-06 55.5 36 63.9
GSVIVG01025008001 Vitis vinifera HOM05D004887 ORTHO05D006168 4.9e-06 55.5 47 53.2
CSS0023093 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 6.4e-06 55.1 47 57.4
AUR62001822 Chenopodium quinoa HOM05D004887 ORTHO05D006168 6.4e-06 55.1 48 54.2
Nn2g12934 Nelumbo nucifera HOM05D004887 ORTHO05D006168 6.4e-06 55.1 36 66.7
Rhsim13G0085300 Rhododendron simsii HOM05D001446 ORTHO05D001360 6.4e-06 55.1 35 65.7
AUR62009609 Chenopodium quinoa HOM05D004887 ORTHO05D006168 8.4e-06 54.7 48 52.1


User provided reference genes

Program Settings