Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A748T28 Lonicera japonica HOM05D011954 ORTHO05D014236 2.0e-116 422.5 224 100.0
Lj1A798T44 Lonicera japonica HOM05D011954 ORTHO05D014236 4.9e-27 125.6 186 40.3
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 2.5e-26 123.2 199 38.7
Lj1A786G23 Lonicera japonica HOM05D011954 ORTHO05D014236 2.8e-22 109.8 198 37.4
Lj1A363G10 Lonicera japonica HOM05D011954 ORTHO05D014236 1.5e-20 104.0 199 34.2
Lj1A773T40 Lonicera japonica HOM05D011954 ORTHO05D014236 2.9e-19 99.8 190 35.8
Lj1A778T39 Lonicera japonica HOM05D011954 ORTHO05D014236 3.8e-19 99.4 190 35.3
Lj1A777T20 Lonicera japonica HOM05D011954 ORTHO05D014236 3.2e-18 96.3 190 35.3
Lj1A773T41 Lonicera japonica HOM05D011954 ORTHO05D014236 9.3e-18 94.7 193 33.2
Lju4319C0T1 Lonicera japonica HOM05D011954 ORTHO05D014236 2.4e-13 80.1 203 33.5
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 7.7e-12 75.1 126 34.9
Lj1A771T10 Lonicera japonica HOM05D011954 ORTHO05D014236 1.7e-11 73.9 116 39.7
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 2.2e-11 73.6 116 35.3
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.9e-10 70.5 139 33.8
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 4.2e-10 69.3 168 30.4
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.2e-10 68.6 122 34.4
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.1e-09 67.0 122 32.0
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.7e-09 66.6 124 37.1
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 7.9e-09 65.1 121 35.5
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.9e-08 62.8 104 35.6
Sed0008488 Sechium edule HOM05D034586 ORTHO05D007789 3.9e-08 62.8 76 42.1
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 5.1e-08 62.4 122 34.4
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 5.1e-08 62.4 130 32.3
Rhsim10G0207200 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.7e-08 62.0 143 30.8
Sed0024472 Sechium edule HOM05D034586 ORTHO05D007789 8.8e-08 61.6 119 33.6
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.0e-07 60.5 123 35.0
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 2.0e-07 60.5 127 33.9
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 3.3e-07 59.7 161 31.1
Sed0015950 Sechium edule HOM05D034586 ORTHO05D007789 5.7e-07 58.9 123 33.3
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.7e-07 58.2 105 34.3
Lj1A777G14 Lonicera japonica HOM05D011954 ORTHO05D014236 9.7e-07 58.2 156 29.5
vmacro13892 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 9.7e-07 58.2 123 34.1
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.3e-06 57.8 109 39.4
TPR.G22948 Trifolium pratense HOM05D009148 ORTHO05D011895 1.3e-06 57.8 120 33.3
TPR.G9036 Trifolium pratense HOM05D042142 ORTHO05D037787 1.7e-06 57.4 65 43.1
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 2.8e-06 56.6 125 31.2
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.7e-06 56.2 123 31.7
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.7e-06 56.2 123 31.7
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 3.7e-06 56.2 149 28.2
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.7e-06 56.2 125 32.0
Rhsim08G0153800 Rhododendron simsii HOM05D042119 ORTHO05D007789 3.7e-06 56.2 129 33.3
RhsimUnG0148900 Rhododendron simsii HOM05D009663 ORTHO05D011812 4.8e-06 55.8 102 33.3
AL7G39700 Arabidopsis lyrata HOM05D008242 ORTHO05D012602 6.3e-06 55.5 174 26.4
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.3e-06 55.5 195 27.7
CSS0012798 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 8.2e-06 55.1 88 38.6
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 8.2e-06 55.1 159 26.4


User provided reference genes

Program Settings