Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A591G26 Lonicera japonica HOM05D004564 ORTHO05D006106 0.0e+00 1437.9 739 100.0
CSS0004840 Camellia sinensis var. sinensis HOM05D004564 ORTHO05D006106 1.8e-307 1058.9 707 78.5
GSVIVG01020836001 Vitis vinifera HOM05D004564 ORTHO05D006106 8.8e-307 1056.6 725 77.4
Ciclev10030760m.g Citrus clementina HOM05D004564 ORTHO05D006106 9.4e-301 1036.6 728 75.4
Actinidia32511 Actinidia chinensis HOM05D004564 ORTHO05D006106 2.3e-299 1031.9 729 75.2
DCAR_016941 Daucus carota HOM05D004564 ORTHO05D006106 2.4e-296 1021.9 722 74.8
Rhsim12G0010800 Rhododendron simsii HOM05D004564 ORTHO05D006106 3.1e-296 1021.5 718 75.2
CiPaw.04G137200 Carya illinoinensis HOM05D004564 ORTHO05D006106 5.4e-296 1020.8 724 74.7
Nn7g37923 Nelumbo nucifera HOM05D004564 ORTHO05D006106 6.6e-294 1013.8 721 73.6
Dinv03683 Davidia involucrata HOM05D004564 ORTHO05D006106 8.6e-294 1013.4 655 81.1
QL08p045017 Quercus lobata HOM05D004564 ORTHO05D006106 1.5e-293 1012.7 801 69.2
RcHm_v2.0_Chr2g0152251 Rosa chinensis HOM05D004564 ORTHO05D006106 1.0e-291 1006.5 730 73.7
Cpa.g.sc119.28 Carica papaya HOM05D004564 ORTHO05D006106 1.4e-291 1006.1 733 73.0
Gorai.007G175000 Gossypium raimondii HOM05D004564 ORTHO05D006106 2.0e-290 1002.3 714 73.7
TAR369G0268 Trochodendron aralioides HOM05D004564 ORTHO05D006106 2.6e-290 1001.9 716 74.0
Duzib133G1099 Durio zibethinus HOM05D004564 ORTHO05D006106 3.7e-289 998.0 715 73.4
Thecc.01G168400 Theobroma cacao HOM05D004564 ORTHO05D006106 8.3e-289 996.9 712 73.7
Cc05_g01430 Coffea canephora HOM05D004564 ORTHO05D006106 5.4e-288 994.2 718 73.4
Prupe.3G177800 Prunus persica HOM05D004564 ORTHO05D006106 7.0e-288 993.8 724 73.3
CANSAT25G1027 Cannabis sativa HOM05D004564 ORTHO05D006106 9.2e-288 993.4 720 72.1
Gohir.A11G157200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 9.2e-288 993.4 717 73.1
MSTRG.6616 Avicennia marina HOM05D004564 ORTHO05D006106 1.2e-287 993.0 719 72.9
TWI59G1136 Tripterygium wilfordii HOM05D004564 ORTHO05D006106 4.5e-287 991.1 730 72.2
Manes.01G123700 Manihot esculenta HOM05D004564 ORTHO05D006106 5.9e-287 990.7 730 71.8
Gohir.D11G164200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 1.3e-286 989.6 717 72.7
Sopen08g021130 Solanum pennellii HOM05D004564 ORTHO05D006106 6.6e-286 987.3 706 73.7
FAN09G3866 Fragaria x ananassa HOM05D004564 ORTHO05D006106 4.3e-285 984.6 744 71.5
FvH4_6g38720 Fragaria vesca HOM05D004564 ORTHO05D006106 1.2e-284 983.0 730 72.3
CsaV3_4G007910 Cucumis sativus L. HOM05D004564 ORTHO05D006106 5.2e-283 977.6 721 71.3
MD09G1148300 Malus domestica HOM05D004564 ORTHO05D006106 2.0e-282 975.7 730 71.9
FAN14G4455 Fragaria x ananassa HOM05D004564 ORTHO05D006106 3.4e-282 974.9 744 71.1
Potri.004G081200 Populus trichocarpa HOM05D004564 ORTHO05D006106 1.4e-280 969.5 730 70.8
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 4.1e-280 968.0 715 70.6
LjContig00049g0003012 Lotus japonicus HOM05D004564 ORTHO05D006106 1.3e-278 963.0 716 71.2
Haze_13558 Corylus avellana HOM05D004564 ORTHO05D006106 1.9e-277 959.1 801 66.4
TPR.G10155 Trifolium pratense HOM05D004564 ORTHO05D006106 2.1e-276 955.7 716 71.1
Solyc08g067190.4 Solanum lycopersicum HOM05D004564 ORTHO05D006106 8.0e-276 953.7 756 68.3
Sabra04G0053900 Salix brachista HOM05D004564 ORTHO05D006106 4.0e-275 951.4 721 70.0
arahy.Tifrunner.gnm1.ann1.THQ3DC Arachis hypogaea HOM05D004564 ORTHO05D006106 1.1e-272 943.3 714 70.4
PSO170G0418 Papaver somniferum HOM05D004564 ORTHO05D006106 1.2e-271 939.9 720 69.3
arahy.Tifrunner.gnm1.ann1.PNUX2Z Arachis hypogaea HOM05D004564 ORTHO05D006106 1.6e-271 939.5 727 69.9
PSO782G0424 Papaver somniferum HOM05D004564 ORTHO05D006106 1.6e-271 939.5 713 69.3
Atru.chr6.2044 Acer truncatum HOM05D004564 ORTHO05D006106 4.6e-271 937.9 672 74.6
Lj1g0025808 Lotus japonicus HOM05D004564 ORTHO05D006106 6.0e-271 937.6 716 70.3
PGR042G1847 Punica granatum HOM05D004564 ORTHO05D006106 3.3e-269 931.8 723 69.0
Ca_06263_v3 Cicer arietinum L. HOM05D004564 ORTHO05D006106 7.3e-269 930.6 755 65.8
Glyma.14G030500 Glycine max HOM05D004564 ORTHO05D006106 7.3e-269 930.6 720 69.7
Phvul.008G194400 Phaseolus vulgaris HOM05D004564 ORTHO05D006106 1.2e-268 929.9 716 69.6
CAN.G348.3 Capsicum annuum HOM05D004564 ORTHO05D006106 2.8e-268 928.7 665 73.8
Medtr5g091020 Medicago truncatula HOM05D004564 ORTHO05D006106 3.6e-268 928.3 716 69.3
VMungo0647G1349 Vigna mungo HOM05D004564 ORTHO05D006106 1.1e-267 926.8 716 69.1
Migut.M00072 Erythranthe guttata HOM05D004564 ORTHO05D006106 4.4e-266 921.4 719 68.2
Lsat_1_v5_gn_9_29980 Lactuca sativa HOM05D004564 ORTHO05D006106 9.9e-266 920.2 734 69.1
ECA247G1853 Erigeron canadensis HOM05D004564 ORTHO05D006106 8.3e-265 917.1 679 71.7
FAN05G0785 Fragaria x ananassa HOM05D004564 ORTHO05D006106 1.4e-264 916.4 894 59.3
Eucgr.A02026 Eucalyptus grandis HOM05D004564 ORTHO05D006106 1.2e-263 913.3 727 67.3
HanXRQChr10g0292821 Helianthus annuus HOM05D004564 ORTHO05D006106 1.2e-263 913.3 680 72.2
EL10Ac1g01740 Beta vulgaris HOM05D004564 ORTHO05D006106 1.7e-262 909.4 712 66.7
Aqoxy1G01488 Aquilegia oxysepala HOM05D004564 ORTHO05D006106 5.4e-256 887.9 697 68.6
COL.COLO4_38399 Corchorus olitorius HOM05D004564 ORTHO05D006106 1.3e-254 883.2 732 65.6
AUR62034940 Chenopodium quinoa HOM05D004564 ORTHO05D006106 2.3e-254 882.5 712 65.9
SGA_v2.0_scaffold181G39711 Striga asiatica HOM05D004564 ORTHO05D006106 3.1e-251 872.1 741 64.1
C05p04820 Brassica napus HOM05D004564 ORTHO05D006106 6.9e-251 870.9 722 63.7
BraA10t42789Z Brassica rapa HOM05D004564 ORTHO05D006106 1.5e-250 869.8 722 63.6
ClCG07G010420 Citrullus lanatus HOM05D004564 ORTHO05D006106 1.5e-250 869.8 679 68.8
THA.LOC104800817 Tarenaya hassleriana HOM05D004564 ORTHO05D006106 1.9e-248 862.8 707 65.1
BcaB02g06779 Brassica carinata HOM05D004564 ORTHO05D006106 4.2e-248 861.7 708 64.5
BolC5t29255H Brassica oleracea HOM05D004564 ORTHO05D006106 9.3e-248 860.5 722 63.0
A10p05220 Brassica napus HOM05D004564 ORTHO05D006106 4.6e-247 858.2 708 63.8
AL1G16620 Arabidopsis lyrata HOM05D004564 ORTHO05D006106 3.3e-245 852.0 701 64.6
Sc06g0007580 Simmondsia chinensis HOM05D004564 ORTHO05D006106 3.3e-245 852.0 676 65.7
AT1G06590 Arabidopsis thaliana HOM05D004564 ORTHO05D006106 9.6e-245 850.5 701 64.8
Aa31LG1G7670 Aethionema arabicum HOM05D004564 ORTHO05D006106 1.6e-244 849.7 704 63.6
Thhalv10006743m.g Eutrema salsugineum HOM05D004564 ORTHO05D006106 2.1e-244 849.4 708 63.4
Carub.0001s0595 Capsella rubella HOM05D004564 ORTHO05D006106 8.1e-244 847.4 711 63.4
Sp1g05350 Schrenkiella parvula HOM05D004564 ORTHO05D006106 2.4e-243 845.9 705 64.4
Nitab4.5_0004346g0010 Nicotiana tabacum HOM05D004564 ORTHO05D006106 2.2e-241 839.3 661 68.5
Hund26665 Selenicereus undatus HOM05D004564 ORTHO05D006106 1.6e-239 833.2 818 56.4
A09p66910 Brassica napus HOM05D004564 ORTHO05D006106 1.6e-236 823.2 705 61.8
AUR62022316 Chenopodium quinoa HOM05D004564 ORTHO05D006106 3.1e-235 818.9 712 62.1
BraA09t42026Z Brassica rapa HOM05D004564 ORTHO05D006106 2.6e-234 815.8 713 61.2
Nitab4.5_0000508g0020 Nicotiana tabacum HOM05D004564 ORTHO05D006106 7.4e-229 797.7 710 63.8
Oeu022916.1 Olea europaea HOM05D004564 ORTHO05D006106 9.3e-224 780.8 919 51.6
Os12g0626300 Oryza sativa ssp. japonica HOM05D004564 ORTHO05D006106 9.3e-224 780.8 685 61.6
Cfa023356 Carpinus fangiana HOM05D004564 ORTHO05D006106 2.5e-221 772.7 736 61.0
unitig_37.g12587 Utricularia gibba HOM05D004564 ORTHO05D006106 6.3e-220 768.1 718 58.5
C08p51140 Brassica napus HOM05D004564 ORTHO05D006106 1.3e-217 760.4 706 58.5
BolC8t52640H Brassica oleracea HOM05D004564 ORTHO05D006106 1.3e-217 760.4 706 58.5
Zm00001eb128180 Zea mays HOM05D004564 ORTHO05D006106 2.5e-216 756.1 678 60.0
Ah.05g168440 Amaranthus hybridus HOM05D004564 ORTHO05D006106 1.2e-215 753.8 696 58.9
vmacro08736 Vaccinium macrocarpon HOM05D004564 ORTHO05D006106 2.3e-214 749.6 556 73.0
CARHR006200 Cardamine hirsuta HOM05D004564 ORTHO05D006106 1.5e-205 720.3 597 63.8
Sed0025117 Sechium edule HOM05D004564 ORTHO05D006106 1.3e-204 717.2 566 68.4
Peaxi162Scf00922g00319 Petunia axillaris HOM05D004564 ORTHO05D006106 3.6e-191 672.5 560 66.1
SalBow1G3587 Salvia bowleyana HOM05D004564 ORTHO05D006106 1.8e-190 670.2 521 68.5
Psat2g017120 Pisum sativum HOM05D004564 ORTHO05D006106 8.6e-169 598.2 458 69.0
ATR0763G133 Amborella trichopoda HOM05D004564 ORTHO05D006106 4.1e-163 579.3 577 56.3
BcaNung07074 Brassica carinata HOM05D004564 ORTHO05D006106 4.7e-159 565.8 465 64.5
FAN02G2671 Fragaria x ananassa HOM05D004564 ORTHO05D006106 1.1e-158 564.7 503 63.6
QL93p2016_0008 Quercus lobata HOM05D004564 ORTHO05D006106 4.1e-155 552.7 377 76.1
MELO3C016147.2 Cucumis melo HOM05D004564 ORTHO05D006106 7.1e-155 552.0 448 65.2
Lalb_Chr10g0106571 Lupinus albus HOM05D004564 ORTHO05D006106 3.6e-143 513.1 415 65.5
SHI30099 Sapria himalayana HOM05D004564 ORTHO05D006106 1.2e-141 508.1 634 48.7
Pp3c3_33140 Physcomitrium patens HOM05D004564 ORTHO05D006106 2.2e-140 503.8 685 45.1
Lalb_Chr10g0106581 Lupinus albus HOM05D004564 ORTHO05D006106 4.9e-124 449.5 301 77.4
MBI18_g13604_MAGBIO Magnolia biondii HOM05D004564 ORTHO05D006106 3.0e-121 440.3 320 72.8
AagrBONN_evm.TU.Sc2ySwM_228.5505 Anthoceros agrestis HOM05D004564 ORTHO05D006106 1.2e-117 428.3 677 40.6
SMO174G0184 Selaginella moellendorffii HOM05D004564 ORTHO05D006106 4.3e-112 409.8 619 40.7
Mapoly0007s0190 Marchantia polymorpha HOM05D004564 ORTHO05D006106 4.3e-104 383.3 678 37.0
CBR_g44342 Chara braunii HOM05D000019 ORTHO05D000353 6.5e-100 369.4 607 39.7
CAN.G3149.1 Capsicum annuum HOM05D004564 ORTHO05D006106 1.4e-97 361.7 228 83.8
GSVIVG01013077001 Vitis vinifera HOM05D004564 ORTHO05D006106 3.9e-97 360.1 241 78.4
Psat2g017160 Pisum sativum HOM05D004564 ORTHO05D006106 1.3e-95 355.1 253 74.3
SEGI_14916 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 9.7e-88 328.9 281 60.9
MD17G1134700 Malus domestica HOM05D004564 ORTHO05D006106 1.2e-82 312.0 281 63.0
HPP92_001867 Vanilla planifolia HOM05D004564 ORTHO05D006106 2.2e-76 291.2 610 36.6
Hma1.2p1_0539F.1_g174590 Hydrangea macrophylla HOM05D004564 ORTHO05D006106 1.8e-73 281.6 186 76.9
vmacro08737 Vaccinium macrocarpon HOM05D004564 ORTHO05D006106 5.7e-72 276.6 180 77.2
Glyma.02G284500 Glycine max HOM05D004564 ORTHO05D006106 1.6e-69 268.5 221 65.6
HPP92_001899 Vanilla planifolia HOM05D004564 ORTHO05D006106 1.0e-60 239.2 440 38.2
CDE02G3007 Ceratophyllum demersum HOM05D004564 ORTHO05D006106 1.6e-53 215.3 152 72.4
Peaxi162Scf00922g00318 Petunia axillaris HOM05D004564 ORTHO05D006106 2.2e-47 194.9 135 74.8
BcaNung07000 Brassica carinata HOM05D004564 ORTHO05D006106 4.6e-37 160.6 126 64.3
TAR626G0994 Trochodendron aralioides HOM05D004564 ORTHO05D006106 1.5e-35 155.6 103 75.7
arahy.Tifrunner.gnm1.ann1.UKG9X7 Arachis hypogaea HOM05D004564 ORTHO05D006106 2.7e-29 134.8 102 62.7
Rhsim02G0232100 Rhododendron simsii HOM05D000252 ORTHO05D000307 2.7e-29 134.8 153 56.2
ATR0763G128 Amborella trichopoda HOM05D004564 ORTHO05D006106 4.3e-27 127.5 94 61.7
ATR0820G167 Amborella trichopoda HOM05D004564 ORTHO05D006106 5.6e-27 127.1 120 56.7
MD17G1134600 Malus domestica HOM05D004564 ORTHO05D006106 2.6e-24 118.2 111 55.9
Rhsim12G0011200 Rhododendron simsii HOM05D004564 ORTHO05D000827 9.3e-22 109.8 100 65.0
TPR.G10922 Trifolium pratense HOM05D004564 ORTHO05D006106 6.6e-20 103.6 84 70.2
Zm00001eb370760 Zea mays HOM05D004564 ORTHO05D006106 1.9e-19 102.1 83 66.3
ATR0598G245 Amborella trichopoda HOM05D004564 ORTHO05D006106 5.6e-19 100.5 105 56.2
arahy.Tifrunner.gnm1.ann1.RHC2N4 Arachis hypogaea HOM05D000056 ORTHO05D006106 7.6e-16 90.1 85 52.9
Rhsim12G0011600 Rhododendron simsii HOM05D004564 ORTHO05D000827 1.6e-13 82.4 66 71.2
TPR.G35705 Trifolium pratense HOM05D023930 ORTHO05D018030 3.9e-12 77.8 131 40.5
TPR.G7402 Trifolium pratense HOM05D023930 ORTHO05D006106 3.9e-12 77.8 131 42.0
Phvul.001G172501 Phaseolus vulgaris HOM05D004564 ORTHO05D006106 2.8e-10 71.6 60 55.0
Rhsim12G0011100 Rhododendron simsii HOM05D004564 ORTHO05D006106 2.8e-10 71.6 69 53.6
SHI30098 Sapria himalayana HOM05D004564 ORTHO05D006106 5.3e-09 67.4 163 31.9
Rhsim12G0011500 Rhododendron simsii HOM05D004564 ORTHO05D006106 1.2e-08 66.2 67 49.3
TPR.G8869 Trifolium pratense HOM05D020190 ORTHO05D018030 1.2e-08 66.2 95 40.0
Cre01.g034650 Chlamydomonas reinhardtii HOM05D004564 ORTHO05D006106 1.5e-08 65.9 169 30.8
SEGI_30840 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 9.9e-08 63.2 113 36.3
SEGI_33722 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 4.9e-07 60.8 83 48.2
Lsat_1_v5_gn_3_122361 Lactuca sativa HOM05D004564 ORTHO05D006106 4.2e-06 57.8 64 48.4
TPR.G18659 Trifolium pratense HOM05D020190 ORTHO05D018030 4.2e-06 57.8 121 33.1


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