Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A540G14 Lonicera japonica HOM05D012073 ORTHO05D010375 5.5e-136 487.6 247 100.0
Lj1A532T8 Lonicera japonica HOM05D012073 ORTHO05D010375 7.9e-111 404.1 247 84.2
Lj1A533T14 Lonicera japonica HOM05D012073 ORTHO05D010375 5.9e-106 387.9 251 79.7
Lj1A540T15 Lonicera japonica HOM05D012073 ORTHO05D010375 6.5e-97 357.8 250 75.2
Lj1P540T8 Lonicera japonica HOM05D012073 ORTHO05D010375 6.8e-86 321.2 231 72.7
Lj1A533T15 Lonicera japonica HOM05D012073 ORTHO05D010375 6.8e-78 294.7 210 75.2
Lj1A538T17 Lonicera japonica HOM05D012073 ORTHO05D010375 5.4e-75 285.0 271 62.0
Lj1A530T31 Lonicera japonica HOM05D012073 ORTHO05D010375 1.6e-71 273.5 279 59.5
Lj1A541T30 Lonicera japonica HOM05D012073 ORTHO05D010375 4.9e-60 235.3 275 53.5
Lju1601A0G40 Lonicera japonica HOM05D012073 ORTHO05D010375 1.2e-45 187.6 267 50.2
Lj1A653T21 Lonicera japonica HOM05D012073 ORTHO05D010375 7.8e-42 174.9 257 47.9
Lj1C533T3 Lonicera japonica HOM05D012073 ORTHO05D010375 4.8e-39 165.6 261 44.8
Lj1A530T30 Lonicera japonica HOM05D012073 ORTHO05D010375 3.8e-36 156.0 152 61.2
Dinv24844 Davidia involucrata HOM05D000455 ORTHO05D000434 7.6e-21 105.1 151 37.7
Lj1P537T17 Lonicera japonica HOM05D012073 ORTHO05D010375 1.7e-20 104.0 152 44.1
Dinv24846 Davidia involucrata HOM05D000455 ORTHO05D000434 3.0e-17 93.2 197 31.0
Dinv24849 Davidia involucrata HOM05D000455 ORTHO05D000434 1.3e-15 87.8 197 30.5
Dinv13089 Davidia involucrata HOM05D000455 ORTHO05D000434 4.8e-15 85.9 183 33.9
MSTRG.21454 Avicennia marina HOM05D000455 ORTHO05D000434 1.8e-14 84.0 166 34.9
Dinv24847 Davidia involucrata HOM05D000455 ORTHO05D000434 4.1e-14 82.8 202 28.7
Dinv10484 Davidia involucrata HOM05D000455 ORTHO05D000434 5.3e-14 82.4 165 31.5
Lj3C59T5 Lonicera japonica HOM05D000455 ORTHO05D010913 1.2e-13 81.3 157 34.4
CSS0041013 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.5e-13 80.9 164 32.9
Lj3C41T3 Lonicera japonica HOM05D000455 ORTHO05D010913 1.5e-13 80.9 200 31.0
CSS0032249 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.0e-12 78.2 184 29.9
CSS0048530 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.7e-12 77.4 154 33.1
CSS0039323 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 5.0e-12 75.9 166 31.3
Dinv38769 Davidia involucrata HOM05D000455 ORTHO05D000434 6.5e-12 75.5 162 32.1
PGSC0003DMG401012256 Solanum tuberosum HOM05D000455 ORTHO05D000434 6.5e-12 75.5 151 32.5
Hma1.2p1_0049F.1_g028210 Hydrangea macrophylla HOM05D000455 ORTHO05D010375 8.4e-12 75.1 175 29.7
CSS0006544 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.9e-11 73.9 189 29.1
DCAR_030911 Daucus carota HOM05D000010 ORTHO05D010375 2.5e-11 73.6 163 28.8
Dinv38771 Davidia involucrata HOM05D000455 ORTHO05D000434 2.5e-11 73.6 145 32.4
Solyc08g082750.3 Solanum lycopersicum HOM05D000455 ORTHO05D000434 3.2e-11 73.2 151 31.8
Sopen08g030990 Solanum pennellii HOM05D000455 ORTHO05D000434 3.2e-11 73.2 151 31.8
CSS0029762 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 7.2e-11 72.0 189 31.2
CSS0044995 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 7.2e-11 72.0 189 31.2
DCAR_030937 Daucus carota HOM05D000455 ORTHO05D010375 9.3e-11 71.6 196 26.5
CSS0000650 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.2e-10 71.2 184 29.3
DCAR_001752 Daucus carota HOM05D000455 ORTHO05D010375 1.2e-10 71.2 159 30.2
CSS0010287 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.6e-10 70.9 165 29.7
Migut.E01689 Erythranthe guttata HOM05D000455 ORTHO05D012328 1.6e-10 70.9 187 31.0
Lj3A59T15 Lonicera japonica HOM05D000455 ORTHO05D010375 1.6e-10 70.9 189 29.6
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 2.1e-10 70.5 152 29.6
CSS0010178 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.1e-10 70.5 215 25.6
CSS0040866 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.1e-10 70.5 189 31.2
Lj3A53T23 Lonicera japonica HOM05D000455 ORTHO05D010913 2.1e-10 70.5 188 30.9
CSS0008760 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.7e-10 70.1 152 30.9
CSS0000073 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 3.5e-10 69.7 185 30.8
DCAR_030934 Daucus carota HOM05D000455 ORTHO05D010375 3.5e-10 69.7 195 27.2
CAN.G963.6 Capsicum annuum HOM05D000455 ORTHO05D000434 4.6e-10 69.3 159 30.8
Lj3A54G25 Lonicera japonica HOM05D000455 ORTHO05D010913 4.6e-10 69.3 212 28.3
CSS0024415 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 6.1e-10 68.9 167 27.5
CSS0027820 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 6.1e-10 68.9 152 30.3
DCAR_030941 Daucus carota HOM05D000455 ORTHO05D010375 6.1e-10 68.9 159 28.9
CSS0048685 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 7.9e-10 68.6 148 29.7
Dinv11542 Davidia involucrata HOM05D000455 ORTHO05D000434 1.0e-09 68.2 142 28.2
Os02g0136000 Oryza sativa ssp. japonica HOM05D000455 ORTHO05D000434 1.8e-09 67.4 192 28.1
Zm00001eb231720 Zea mays HOM05D000455 ORTHO05D000434 2.3e-09 67.0 196 27.0
Lj3C20G5 Lonicera japonica HOM05D000455 ORTHO05D000462 3.0e-09 66.6 179 29.1
CSS0021735 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 3.9e-09 66.2 163 31.9
Dinv01857 Davidia involucrata HOM05D000455 ORTHO05D010375 3.9e-09 66.2 186 28.0
Lj3C59T4 Lonicera japonica HOM05D000455 ORTHO05D010913 3.9e-09 66.2 143 30.8
CSS0013811 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 5.1e-09 65.9 191 26.2
Cc11_g02140 Coffea canephora HOM05D000455 ORTHO05D000434 6.7e-09 65.5 153 30.1
Dinv10489 Davidia involucrata HOM05D000455 ORTHO05D000434 6.7e-09 65.5 243 25.9
Lj3C56G6 Lonicera japonica HOM05D000455 ORTHO05D010913 6.7e-09 65.5 200 29.5
CSS0025475 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 8.7e-09 65.1 167 26.3
Dinv34975 Davidia involucrata HOM05D000455 ORTHO05D000434 8.7e-09 65.1 219 26.5
Migut.E00958 Erythranthe guttata HOM05D000455 ORTHO05D000434 8.7e-09 65.1 173 30.1
Oeu041396.1 Olea europaea HOM05D000455 ORTHO05D000434 1.1e-08 64.7 177 28.2
Cc00_g22160 Coffea canephora HOM05D000455 ORTHO05D000434 1.5e-08 64.3 143 30.1
Cc00_g35530 Coffea canephora HOM05D000455 ORTHO05D010375 1.5e-08 64.3 149 31.5
Lj3A57G24 Lonicera japonica HOM05D000455 ORTHO05D010913 1.5e-08 64.3 153 30.1
Lj8A565T13 Lonicera japonica HOM05D000455 ORTHO05D010913 1.5e-08 64.3 154 31.8
CSS0026143 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.9e-08 63.9 167 26.3
Cc00_g10740 Coffea canephora HOM05D000455 ORTHO05D010375 1.9e-08 63.9 143 30.1
Cc06_g22030 Coffea canephora HOM05D000455 ORTHO05D010375 1.9e-08 63.9 143 30.1
HanXRQChr05g0133721 Helianthus annuus HOM05D000455 ORTHO05D011724 2.5e-08 63.5 143 30.1
Lj3C58T3 Lonicera japonica HOM05D000455 ORTHO05D010913 2.5e-08 63.5 154 30.5
Cc06_g21860 Coffea canephora HOM05D000455 ORTHO05D010375 3.3e-08 63.2 139 29.5
Cc06_g21980 Coffea canephora HOM05D000455 ORTHO05D000434 3.3e-08 63.2 152 29.6
Nitab4.5_0007956g0010 Nicotiana tabacum HOM05D000455 ORTHO05D000434 4.3e-08 62.8 175 30.3
DCAR_030939 Daucus carota HOM05D000455 ORTHO05D010375 5.7e-08 62.4 158 27.2
CSS0047654 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 7.4e-08 62.0 146 25.3
vmacro18354 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 7.4e-08 62.0 174 27.6
DCAR_030919 Daucus carota HOM05D000455 ORTHO05D010375 9.7e-08 61.6 161 29.2
Lj3A56G20 Lonicera japonica HOM05D000455 ORTHO05D010913 9.7e-08 61.6 185 28.1
Lj3C62T11 Lonicera japonica HOM05D000455 ORTHO05D010913 9.7e-08 61.6 151 31.1
Lsat_1_v5_gn_5_52160 Lactuca sativa HOM05D000455 ORTHO05D011724 1.3e-07 61.2 142 31.0
Lj3A57T25 Lonicera japonica HOM05D000455 ORTHO05D010913 1.3e-07 61.2 147 32.7
Cc06_g21870 Coffea canephora HOM05D000455 ORTHO05D000434 1.6e-07 60.8 152 28.9
DCAR_030918 Daucus carota HOM05D000455 ORTHO05D010375 1.6e-07 60.8 147 31.3
Lj3C66T0 Lonicera japonica HOM05D000455 ORTHO05D010913 1.6e-07 60.8 193 26.4
Nitab4.5_0002766g0090 Nicotiana tabacum HOM05D000455 ORTHO05D010375 1.6e-07 60.8 165 30.9
vmacro11342 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 1.6e-07 60.8 175 29.1
Dinv37381 Davidia involucrata HOM05D000455 ORTHO05D010375 2.2e-07 60.5 156 31.4
ECA232G1787 Erigeron canadensis HOM05D000455 ORTHO05D000434 3.7e-07 59.7 163 28.8
Nitab4.5_0002766g0100 Nicotiana tabacum HOM05D000455 ORTHO05D000434 3.7e-07 59.7 151 32.5
CSS0015680 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 4.8e-07 59.3 172 26.7
Dinv01855 Davidia involucrata HOM05D000455 ORTHO05D000434 4.8e-07 59.3 57 43.9
HanXRQChr02g0047821 Helianthus annuus HOM05D000455 ORTHO05D000434 4.8e-07 59.3 154 29.2
Cc07_g19820 Coffea canephora HOM05D000455 ORTHO05D000434 6.3e-07 58.9 139 27.3
ECA232G1018 Erigeron canadensis HOM05D000455 ORTHO05D000434 6.3e-07 58.9 167 28.7
Lsat_1_v5_gn_5_52180 Lactuca sativa HOM05D000455 ORTHO05D011724 6.3e-07 58.9 140 27.1
SalBow4G3141 Salvia bowleyana HOM05D000455 ORTHO05D012328 6.3e-07 58.9 170 28.8
CSS0027396 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.1e-06 58.2 143 24.5
Cc06_g22000 Coffea canephora HOM05D000455 ORTHO05D000434 1.1e-06 58.2 144 29.9
Thhalv10023271m.g Eutrema salsugineum HOM05D000455 ORTHO05D000434 1.1e-06 58.2 151 32.5
Nitab4.5_0000493g0040 Nicotiana tabacum HOM05D012522 ORTHO05D012714 1.1e-06 58.2 81 42.0
CSS0038214 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.4e-06 57.8 148 29.1
DCAR_002189 Daucus carota HOM05D000455 ORTHO05D000434 1.4e-06 57.8 157 25.5
Cc07_g19830 Coffea canephora HOM05D000455 ORTHO05D010375 1.8e-06 57.4 139 28.1
ECA233G0695 Erigeron canadensis HOM05D000455 ORTHO05D010375 1.8e-06 57.4 195 26.2
Cc06_g21940 Coffea canephora HOM05D000455 ORTHO05D010375 2.4e-06 57.0 168 28.0
DCAR_030927 Daucus carota HOM05D000455 ORTHO05D000434 2.4e-06 57.0 212 24.1
DCAR_030936 Daucus carota HOM05D000455 ORTHO05D010375 2.4e-06 57.0 179 24.0
Dinv38202 Davidia involucrata HOM05D000455 ORTHO05D000434 2.4e-06 57.0 78 43.6
HanXRQChr05g0133691 Helianthus annuus HOM05D000455 ORTHO05D011724 2.4e-06 57.0 164 26.8
HanXRQChr08g0213761 Helianthus annuus HOM05D000455 ORTHO05D000434 2.4e-06 57.0 180 27.8
Lj3A52G17 Lonicera japonica HOM05D000455 ORTHO05D010913 2.4e-06 57.0 187 28.3
Peaxi162Scf00029g00319 Petunia axillaris HOM05D000455 ORTHO05D011453 2.4e-06 57.0 155 29.0
SalBow4G0297 Salvia bowleyana HOM05D000455 ORTHO05D012328 2.4e-06 57.0 150 26.7
Lj3C53T8 Lonicera japonica HOM05D000455 ORTHO05D010913 3.1e-06 56.6 174 30.5
Migut.E00886 Erythranthe guttata HOM05D000455 ORTHO05D012328 4.1e-06 56.2 174 26.4
Cc00_g29760 Coffea canephora HOM05D000455 ORTHO05D000434 5.3e-06 55.8 187 26.7
DCAR_030926 Daucus carota HOM05D000455 ORTHO05D000434 5.3e-06 55.8 207 22.7
HanXRQChr05g0133711 Helianthus annuus HOM05D000455 ORTHO05D000434 5.3e-06 55.8 105 33.3
PGSC0003DMG402032501 Solanum tuberosum HOM05D000455 ORTHO05D011453 5.3e-06 55.8 192 27.1
Zm00001eb118950 Zea mays HOM05D000455 ORTHO05D000434 5.3e-06 55.8 71 43.7
Nitab4.5_0004806g0040 Nicotiana tabacum HOM05D000455 ORTHO05D000434 6.9e-06 55.5 175 28.6
Cc06_g21990 Coffea canephora HOM05D000455 ORTHO05D010375 9.0e-06 55.1 149 27.5


User provided reference genes

Program Settings