Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A515T9 Lonicera japonica HOM05D008906 ORTHO05D010752 7.8e-141 503.8 261 100.0
Sed0018125 Sechium edule HOM05D008906 ORTHO05D010752 4.5e-56 222.2 285 41.8
ClCG03G011160 Citrullus lanatus HOM05D008906 ORTHO05D010752 2.9e-55 219.5 279 42.3
ClCG03G011130 Citrullus lanatus HOM05D008906 ORTHO05D010752 6.5e-55 218.4 285 40.0
Sed0001310 Sechium edule HOM05D008906 ORTHO05D010752 9.4e-54 214.5 285 40.0
ClCG11G000600 Citrullus lanatus HOM05D008906 ORTHO05D010752 2.1e-53 213.4 281 42.3
CsaV3_1G044120 Cucumis sativus L. HOM05D008906 ORTHO05D010752 1.2e-51 207.6 279 39.4
Lj3A898T32 Lonicera japonica HOM05D008906 ORTHO05D010752 2.6e-51 206.5 288 38.2
Sed0004553 Sechium edule HOM05D008906 ORTHO05D010752 2.6e-51 206.5 281 39.1
MELO3C010005.2 Cucumis melo HOM05D008906 ORTHO05D010752 6.3e-50 201.8 279 38.4
MD17G1147800 Malus domestica HOM05D008906 ORTHO05D010752 7.0e-49 198.4 278 41.4
ClCG03G011150 Citrullus lanatus HOM05D008906 ORTHO05D010752 2.9e-47 193.0 285 38.6
MD10G1107800 Malus domestica HOM05D008906 ORTHO05D010752 5.0e-47 192.2 282 37.6
MD09G1162800 Malus domestica HOM05D008906 ORTHO05D010752 2.1e-45 186.8 277 38.6
SGA_v2.0_scaffold163G38045 Striga asiatica HOM05D008906 ORTHO05D010752 7.5e-35 151.8 321 32.4
Os04g0308600 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 2.9e-34 149.8 280 35.0
AUR62036570 Chenopodium quinoa HOM05D008906 ORTHO05D010752 1.1e-33 147.9 286 34.6
Os04g0309900 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 9.2e-33 144.8 277 33.6
Ah.14g087280 Amaranthus hybridus HOM05D008906 ORTHO05D010752 3.5e-32 142.9 282 34.4
Ah.14g087260 Amaranthus hybridus HOM05D008906 ORTHO05D010752 6.6e-31 138.7 285 32.6
EL10Ac8g20498 Beta vulgaris HOM05D008906 ORTHO05D010752 4.3e-30 136.0 276 34.1
DCAR_016018 Daucus carota HOM05D008906 ORTHO05D010752 2.8e-29 133.3 282 34.0
DCAR_016019 Daucus carota HOM05D008906 ORTHO05D010752 2.8e-29 133.3 282 34.0
AUR62027397 Chenopodium quinoa HOM05D008906 ORTHO05D010752 2.2e-26 123.6 275 31.3
AUR62031153 Chenopodium quinoa HOM05D008906 ORTHO05D010752 2.2e-26 123.6 285 31.2
DCAR_015953 Daucus carota HOM05D008906 ORTHO05D010752 6.4e-26 122.1 283 31.4
Actinidia30933 Actinidia chinensis HOM05D008906 ORTHO05D010752 1.0e-23 114.8 260 30.8
Zm00001eb137390 Zea mays HOM05D008906 ORTHO05D010752 1.1e-22 111.3 270 33.0
Cre07.g321750 Chlamydomonas reinhardtii HOM05D008906 ORTHO05D010752 1.5e-22 110.9 299 30.1
Zm00001eb137480 Zea mays HOM05D008906 ORTHO05D010752 8.1e-21 105.1 290 31.0
CSS0023788 Camellia sinensis var. sinensis HOM05D008906 ORTHO05D010752 3.7e-18 96.3 151 36.4
Hma1.2p1_0543F.1_g175190 Hydrangea macrophylla HOM05D008906 ORTHO05D010752 4.1e-17 92.8 149 40.9
Sc05g0004700 Simmondsia chinensis HOM05D014687 ORTHO05D010752 7.1e-17 92.0 206 33.5
Sc08g0007420 Simmondsia chinensis HOM05D014687 ORTHO05D010752 4.3e-14 82.8 364 25.3
SGA_v2.0_scaffold11G05641 Striga asiatica HOM05D008906 ORTHO05D010752 1.2e-13 81.3 175 33.7
Sc08g0007400 Simmondsia chinensis HOM05D014687 ORTHO05D010752 1.1e-12 78.2 358 24.6
EL10Ac6g13638 Beta vulgaris HOM05D008906 ORTHO05D010752 6.8e-12 75.5 184 30.4
Dinv13661 Davidia involucrata HOM05D008906 ORTHO05D010752 3.2e-09 66.6 83 42.2
Dinv13668 Davidia involucrata HOM05D008906 ORTHO05D010752 5.4e-09 65.9 122 35.2
Sc08g0007410 Simmondsia chinensis HOM05D014687 ORTHO05D010752 3.5e-08 63.2 237 26.2


User provided reference genes

Program Settings