Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 3.0e-96 355.1 177 100.0
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 5.1e-51 204.9 168 66.1
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 3.3e-50 202.2 173 67.6
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 7.3e-50 201.1 165 65.5
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 1.2e-49 200.3 174 64.9
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 2.1e-49 199.5 171 63.2
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 4.7e-49 198.4 173 62.4
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 1.4e-48 196.8 165 61.2
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.8e-48 196.4 168 63.1
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 3.4e-47 192.2 111 81.1
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 4.4e-47 191.8 171 59.6
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 7.6e-47 191.0 142 66.9
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 1.3e-46 190.3 179 60.9
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 3.8e-46 188.7 171 58.5
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 1.4e-45 186.8 127 74.8
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 5.4e-45 184.9 162 63.0
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 7.1e-45 184.5 107 81.3
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 7.1e-45 184.5 107 81.3
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 7.1e-45 184.5 160 60.6
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 7.1e-45 184.5 106 82.1
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 1.6e-44 183.3 168 57.7
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 2.1e-44 183.0 186 55.4
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 2.1e-44 183.0 124 71.0
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 4.6e-44 181.8 186 56.5
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 7.8e-44 181.0 163 58.3
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 7.8e-44 181.0 150 62.0
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 1.0e-43 180.6 179 56.4
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 1.3e-43 180.3 110 76.4
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 1.3e-43 180.3 180 57.2
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 1.7e-43 179.9 169 56.8
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 2.3e-43 179.5 172 59.3
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 3.0e-43 179.1 115 68.7
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 3.0e-43 179.1 115 68.7
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 3.0e-43 179.1 115 68.7
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 3.0e-43 179.1 172 58.1
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 3.0e-43 179.1 176 54.5
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 3.0e-43 179.1 173 56.6
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 3.9e-43 178.7 115 68.7
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 3.9e-43 178.7 115 68.7
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 3.9e-43 178.7 144 59.7
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 3.9e-43 178.7 178 56.2
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 6.6e-43 177.9 168 56.0
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 8.7e-43 177.6 135 63.0
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 1.1e-42 177.2 109 74.3
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 1.5e-42 176.8 181 55.8
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 1.5e-42 176.8 106 74.5
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.9e-42 176.4 128 68.0
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 2.5e-42 176.0 181 54.1
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 3.3e-42 175.6 149 61.7
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 4.3e-42 175.3 182 54.4
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 5.6e-42 174.9 153 56.9
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 5.6e-42 174.9 128 67.2
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 5.6e-42 174.9 182 54.4
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 1.3e-41 173.7 153 54.2
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 1.6e-41 173.3 165 57.6
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 1.6e-41 173.3 140 62.9
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 2.1e-41 172.9 139 59.0
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 3.6e-41 172.2 179 56.4
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 3.6e-41 172.2 171 59.1
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 3.6e-41 172.2 112 73.2
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 4.8e-41 171.8 109 73.4
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 6.2e-41 171.4 165 58.2
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 6.2e-41 171.4 139 59.0
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 6.2e-41 171.4 165 58.8
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 8.1e-41 171.0 176 52.8
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 1.8e-40 169.9 154 55.2
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 2.4e-40 169.5 154 54.5
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 5.3e-40 168.3 177 57.1
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 9.0e-40 167.5 106 71.7
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 9.0e-40 167.5 125 64.8
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 1.5e-39 166.8 112 67.0
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 2.6e-39 166.0 167 55.7
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 9.9e-39 164.1 164 56.7
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 1.3e-38 163.7 114 63.2
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 6.4e-38 161.4 176 55.1
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 2.4e-37 159.5 213 46.9
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 7.1e-37 157.9 102 68.6
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 7.1e-37 157.9 168 52.4
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 1.2e-36 157.1 178 48.3
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 7.9e-36 154.5 175 52.0
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 1.3e-35 153.7 100 70.0
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 1.5e-34 150.2 154 53.2
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 1.4e-32 143.7 94 73.4
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 1.4e-32 143.7 81 81.5
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 1.8e-32 143.3 152 54.6
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 9.0e-32 141.0 150 51.3
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 9.0e-32 141.0 104 65.4
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 9.0e-32 141.0 84 76.2
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 1.2e-31 140.6 97 69.1
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 2.0e-31 139.8 131 53.4
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 3.2e-29 132.5 95 63.2
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 1.2e-28 130.6 83 74.7
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 1.6e-28 130.2 104 58.7
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 6.0e-28 128.3 114 50.9
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 7.9e-28 127.9 148 54.1
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 2.3e-27 126.3 152 49.3
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 2.3e-27 126.3 125 48.0
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 2.2e-22 109.8 72 69.4
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 2.3e-19 99.8 84 57.1
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 1.5e-18 97.1 75 60.0
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 9.0e-16 87.8 59 67.8
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 1.2e-15 87.4 97 54.6
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 4.6e-12 75.5 109 45.0
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 7.9e-12 74.7 111 45.9
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 3.0e-11 72.8 91 46.2
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 1.5e-10 70.5 34 88.2
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 3.7e-09 65.9 179 33.0


User provided reference genes

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