Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A43G57 Lonicera japonica HOM05D002930 ORTHO05D003283 3.9e-78 294.7 142 100.0
SGA_v2.0_scaffold11G05785 Striga asiatica HOM05D002930 ORTHO05D003283 4.3e-69 264.6 140 90.0
Ah.08g212870 Amaranthus hybridus HOM05D002930 ORTHO05D003283 8.2e-68 260.4 140 87.1
Dinv11268 Davidia involucrata HOM05D002930 ORTHO05D003283 1.1e-67 260.0 139 87.8
Oeu047489.1 Olea europaea HOM05D002930 ORTHO05D003283 3.1e-67 258.5 141 87.2
MSTRG.17432 Avicennia marina HOM05D002930 ORTHO05D003283 6.9e-67 257.3 140 86.4
Hma1.2p1_2318F.1_g319800 Hydrangea macrophylla HOM05D002930 ORTHO05D003283 1.2e-66 256.5 140 88.6
SGA_v2.0_scaffold172G39040 Striga asiatica HOM05D002930 ORTHO05D003283 1.2e-66 256.5 140 87.1
Migut.N02138 Erythranthe guttata HOM05D002930 ORTHO05D003283 1.5e-66 256.1 140 85.0
AUR62033688 Chenopodium quinoa HOM05D002930 ORTHO05D003283 2.6e-66 255.4 138 86.2
AUR62036777 Chenopodium quinoa HOM05D002930 ORTHO05D003283 2.6e-66 255.4 138 86.2
DCAR_018381 Daucus carota HOM05D002930 ORTHO05D003283 2.6e-66 255.4 140 85.7
Hund05360 Selenicereus undatus HOM05D002930 ORTHO05D003283 2.6e-66 255.4 138 87.0
CSS0004978 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 4.5e-66 254.6 140 85.0
MD03G1271800 Malus domestica HOM05D002930 ORTHO05D003283 4.5e-66 254.6 139 87.8
CAN.G956.11 Capsicum annuum HOM05D002930 ORTHO05D003283 7.6e-66 253.8 141 85.1
Phvul.007G168500 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 1.3e-65 253.1 143 85.3
SalBow3G3307 Salvia bowleyana HOM05D002930 ORTHO05D003283 1.3e-65 253.1 140 85.7
SalBow6G0735 Salvia bowleyana HOM05D002930 ORTHO05D003283 1.3e-65 253.1 138 86.2
Thecc.01G286000 Theobroma cacao HOM05D002930 ORTHO05D003283 1.3e-65 253.1 141 85.8
Cfa006078 Carpinus fangiana HOM05D002930 ORTHO05D003283 1.7e-65 252.7 141 83.0
PGSC0003DMG400003809 Solanum tuberosum HOM05D002930 ORTHO05D003283 1.7e-65 252.7 141 85.1
MD11G1292400 Malus domestica HOM05D002930 ORTHO05D003283 2.2e-65 252.3 141 85.8
Aqoxy5G00565 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 2.9e-65 251.9 138 85.5
EL10Ac7g17191 Beta vulgaris HOM05D002930 ORTHO05D003283 2.9e-65 251.9 140 82.1
Lj5g0012178 Lotus japonicus HOM05D002930 ORTHO05D003283 2.9e-65 251.9 141 85.8
Solyc09g074110.4 Solanum lycopersicum HOM05D002930 ORTHO05D003283 2.9e-65 251.9 141 85.1
Sopen09g028930 Solanum pennellii HOM05D002930 ORTHO05D003283 2.9e-65 251.9 141 85.1
Duzib138G0507 Durio zibethinus HOM05D002930 ORTHO05D003283 3.8e-65 251.5 142 85.2
Actinidia21089 Actinidia chinensis HOM05D002930 ORTHO05D003283 4.9e-65 251.1 138 87.0
DCAR_012456 Daucus carota HOM05D002930 ORTHO05D003283 4.9e-65 251.1 140 83.6
TAR365G0233 Trochodendron aralioides HOM05D002930 ORTHO05D003283 4.9e-65 251.1 140 85.7
TWI59G1251 Tripterygium wilfordii HOM05D002930 ORTHO05D003283 6.5e-65 250.8 141 84.4
VMungo0720G1472 Vigna mungo HOM05D002930 ORTHO05D003283 6.5e-65 250.8 142 85.2
Gohir.A11G119600 Gossypium hirsutum HOM05D002930 ORTHO05D003283 8.4e-65 250.4 139 86.3
Gohir.D11G124400 Gossypium hirsutum HOM05D002930 ORTHO05D003283 8.4e-65 250.4 139 86.3
Gorai.007G133300 Gossypium raimondii HOM05D002930 ORTHO05D003283 8.4e-65 250.4 139 86.3
TPR.G13301 Trifolium pratense HOM05D002930 ORTHO05D003283 8.4e-65 250.4 140 87.1
GSVIVG01011059001 Vitis vinifera HOM05D002930 ORTHO05D003283 8.4e-65 250.4 142 85.2
Lalb_Chr21g0306621 Lupinus albus HOM05D002930 ORTHO05D003283 1.1e-64 250.0 140 85.7
Nitab4.5_0002927g0030 Nicotiana tabacum HOM05D002930 ORTHO05D003283 1.1e-64 250.0 134 88.1
Potri.014G137200 Populus trichocarpa HOM05D002930 ORTHO05D003283 1.1e-64 250.0 139 86.3
Eucgr.H01545 Eucalyptus grandis HOM05D002930 ORTHO05D003283 1.4e-64 249.6 141 84.4
Psat6g169840 Pisum sativum HOM05D002930 ORTHO05D003283 1.4e-64 249.6 140 85.7
ECA236G2879 Erigeron canadensis HOM05D002930 ORTHO05D003283 1.9e-64 249.2 141 85.8
Glyma.10G023700 Glycine max HOM05D002930 ORTHO05D003283 1.9e-64 249.2 142 83.8
HanXRQChr04g0117981 Helianthus annuus HOM05D002930 ORTHO05D003283 1.9e-64 249.2 141 85.8
Lsat_1_v5_gn_8_55460 Lactuca sativa HOM05D002930 ORTHO05D003283 1.9e-64 249.2 141 87.2
Medtr1g089760 Medicago truncatula HOM05D002930 ORTHO05D003283 2.5e-64 248.8 140 85.7
Peaxi162Scf00941g00113 Petunia axillaris HOM05D002930 ORTHO05D003283 3.2e-64 248.4 135 86.7
Glyma.02G150200 Glycine max HOM05D002930 ORTHO05D003283 4.2e-64 248.1 142 83.1
Gohir.A08G184940 Gossypium hirsutum HOM05D002930 ORTHO05D003283 4.2e-64 248.1 141 85.1
Manes.05G071700 Manihot esculenta HOM05D002930 ORTHO05D003283 4.2e-64 248.1 139 84.2
Prupe.8G248000 Prunus persica HOM05D002930 ORTHO05D003283 4.2e-64 248.1 141 84.4
arahy.Tifrunner.gnm1.ann1.K2UAY4 Arachis hypogaea HOM05D002930 ORTHO05D003283 5.5e-64 247.7 140 87.1
CSS0023451 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 5.5e-64 247.7 136 85.3
arahy.Tifrunner.gnm1.ann1.M1RB0X Arachis hypogaea HOM05D002930 ORTHO05D003283 7.1e-64 247.3 140 87.1
Rhsim01G0277900 Rhododendron simsii HOM05D002930 ORTHO05D003283 7.1e-64 247.3 138 84.1
MBI19_g21645_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 9.3e-64 246.9 138 84.8
PGR083G0736 Punica granatum HOM05D002930 ORTHO05D003283 9.3e-64 246.9 138 84.8
Aqoxy211s006 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 1.2e-63 246.5 140 82.9
Aqoxy2G03186 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 1.2e-63 246.5 140 82.9
Nn3g21179 Nelumbo nucifera HOM05D002930 ORTHO05D003283 1.2e-63 246.5 140 82.1
CiPaw.07G096200 Carya illinoinensis HOM05D002930 ORTHO05D003283 1.6e-63 246.1 139 82.7
Gorai.004G215100 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.6e-63 246.1 139 85.6
ECA247G2962 Erigeron canadensis HOM05D002930 ORTHO05D003283 3.5e-63 245.0 138 87.0
vmacro14944 Vaccinium macrocarpon HOM05D002930 ORTHO05D003283 3.5e-63 245.0 139 83.5
PSO210G3942 Papaver somniferum HOM05D002930 ORTHO05D003283 4.6e-63 244.6 140 83.6
GSVIVG01022038001 Vitis vinifera HOM05D002930 ORTHO05D003283 4.6e-63 244.6 138 84.1
ATR0626G265 Amborella trichopoda HOM05D002930 ORTHO05D003283 6.0e-63 244.2 140 82.9
Ciclev10018445m.g Citrus clementina HOM05D002930 ORTHO05D003283 6.0e-63 244.2 139 84.2
Gohir.D08G203100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 6.0e-63 244.2 139 84.9
QL12p022973 Quercus lobata HOM05D002930 ORTHO05D003283 6.0e-63 244.2 138 82.6
Haze_04772 Corylus avellana HOM05D002930 ORTHO05D003283 7.9e-63 243.8 139 82.0
CsaV3_7G028480 Cucumis sativus L. HOM05D002930 ORTHO05D003283 7.9e-63 243.8 139 84.2
Atru.chr5.1328 Acer truncatum HOM05D002930 ORTHO05D003283 1.0e-62 243.4 141 83.7
Aa31LG1G29470 Aethionema arabicum HOM05D002930 ORTHO05D003283 1.0e-62 243.4 141 80.9
ClCG09G006750 Citrullus lanatus HOM05D002930 ORTHO05D003283 1.0e-62 243.4 139 84.2
MELO3C015874.2 Cucumis melo HOM05D002930 ORTHO05D003283 1.0e-62 243.4 139 84.2
Sed0024970 Sechium edule HOM05D002930 ORTHO05D003283 1.0e-62 243.4 141 82.3
unitig_744.g24487 Utricularia gibba HOM05D002930 ORTHO05D003283 1.3e-62 243.0 141 82.3
Actinidia05730 Actinidia chinensis HOM05D002930 ORTHO05D003283 1.8e-62 242.7 140 82.1
CSS0043122 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 1.8e-62 242.7 138 84.1
RcHm_v2.0_Chr6g0291991 Rosa chinensis HOM05D002930 ORTHO05D003283 1.8e-62 242.7 140 82.1
THA.LOC104802222 Tarenaya hassleriana HOM05D002930 ORTHO05D003283 1.8e-62 242.7 141 80.9
CANSAT54G0439 Cannabis sativa HOM05D002930 ORTHO05D003283 3.0e-62 241.9 138 84.8
FvH4_2g24180 Fragaria vesca HOM05D002930 ORTHO05D003283 6.7e-62 240.7 140 82.1
FAN24G0623 Fragaria x ananassa HOM05D002930 ORTHO05D003283 6.7e-62 240.7 140 82.1
HPP92_017201 Vanilla planifolia HOM05D002930 ORTHO05D003283 8.7e-62 240.4 140 80.7
CDE08G1581 Ceratophyllum demersum HOM05D002930 ORTHO05D003283 1.1e-61 240.0 142 77.5
Sp4g29950 Schrenkiella parvula HOM05D002930 ORTHO05D003283 1.9e-61 239.2 142 79.6
Duzib177G0642 Durio zibethinus HOM05D002930 ORTHO05D003283 2.5e-61 238.8 138 82.6
FAN27G1593 Fragaria x ananassa HOM05D002930 ORTHO05D003283 2.5e-61 238.8 140 81.4
Potri.005G037700 Populus trichocarpa HOM05D002930 ORTHO05D003283 3.3e-61 238.4 138 84.8
Sabra05G0038400 Salix brachista HOM05D002930 ORTHO05D003283 3.3e-61 238.4 138 84.8
BcaB02g08731 Brassica carinata HOM05D002930 ORTHO05D003283 7.4e-61 237.3 142 79.6
HPP92_025233 Vanilla planifolia HOM05D002930 ORTHO05D003283 9.7e-61 236.9 140 79.3
BcaC02g12557 Brassica carinata HOM05D002930 ORTHO05D003283 1.3e-60 236.5 142 79.6
A05p00070 Brassica napus HOM05D002930 ORTHO05D003283 1.3e-60 236.5 142 79.6
BNapus_Darmor_BZH_scaffold_188p00030 Brassica napus HOM05D002930 ORTHO05D003283 1.3e-60 236.5 142 79.6
BolSC55t61233H Brassica oleracea HOM05D002930 ORTHO05D003283 1.3e-60 236.5 142 79.6
BraA05t19003Z Brassica rapa HOM05D002930 ORTHO05D003283 1.3e-60 236.5 142 79.6
Eucgr.B02004 Eucalyptus grandis HOM05D002930 ORTHO05D003283 1.3e-60 236.5 134 85.1
Aa31LG10G16860 Aethionema arabicum HOM05D002930 ORTHO05D003283 1.6e-60 236.1 142 76.8
COL.COLO4_13526 Corchorus olitorius HOM05D002930 ORTHO05D003283 1.6e-60 236.1 138 79.7
Lalb_Chr04g0260861 Lupinus albus HOM05D002930 ORTHO05D003283 1.6e-60 236.1 138 81.2
Thecc.05G299700 Theobroma cacao HOM05D002930 ORTHO05D003283 1.6e-60 236.1 138 80.4
BolC4t28786H Brassica oleracea HOM05D002930 ORTHO05D003283 2.1e-60 235.7 142 78.9
Ca_09379_v3 Cicer arietinum L. HOM05D002930 ORTHO05D003283 2.1e-60 235.7 138 81.2
A04p35160 Brassica napus HOM05D002930 ORTHO05D003283 2.8e-60 235.3 142 78.9
BraA04t18952Z Brassica rapa HOM05D002930 ORTHO05D003283 2.8e-60 235.3 142 78.9
TPR.G33213 Trifolium pratense HOM05D002930 ORTHO05D003283 2.8e-60 235.3 138 80.4
Carub.0004s3076 Capsella rubella HOM05D002930 ORTHO05D003283 3.7e-60 235.0 142 78.9
HanXRQChr15g0466571 Helianthus annuus HOM05D002930 ORTHO05D003283 3.7e-60 235.0 139 84.9
Sabra14G0103600 Salix brachista HOM05D002930 ORTHO05D003283 3.7e-60 235.0 171 70.2
AT2G48060 Arabidopsis thaliana HOM05D002930 ORTHO05D003283 4.8e-60 234.6 142 78.9
AL4G47650 Arabidopsis lyrata HOM05D002930 ORTHO05D003283 6.3e-60 234.2 142 78.9
Thhalv10001278m.g Eutrema salsugineum HOM05D002930 ORTHO05D003283 6.3e-60 234.2 142 78.9
Gohir.A13G106800 Gossypium hirsutum HOM05D002930 ORTHO05D003283 6.3e-60 234.2 142 78.9
Medtr7g113930 Medicago truncatula HOM05D002930 ORTHO05D003283 6.3e-60 234.2 138 81.2
Cc02_g32570 Coffea canephora HOM05D002930 ORTHO05D003283 8.2e-60 233.8 140 80.0
Lj1g0027310 Lotus japonicus HOM05D002930 ORTHO05D003283 1.1e-59 233.4 138 79.7
arahy.Tifrunner.gnm1.ann1.HQA39L Arachis hypogaea HOM05D002930 ORTHO05D003283 2.4e-59 232.3 140 77.9
arahy.Tifrunner.gnm1.ann1.MJP89X Arachis hypogaea HOM05D002930 ORTHO05D003283 2.4e-59 232.3 140 77.9
Gohir.D13G110000 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.4e-59 232.3 138 81.2
Gorai.013G123400 Gossypium raimondii HOM05D002930 ORTHO05D003283 2.4e-59 232.3 138 81.2
Glyma.19G238300 Glycine max HOM05D002930 ORTHO05D003283 5.3e-59 231.1 138 80.4
FAN15G2723 Fragaria x ananassa HOM05D002930 ORTHO05D003283 6.9e-59 230.7 140 80.0
Os01g0388500 Oryza sativa ssp. japonica HOM05D002930 ORTHO05D003283 6.9e-59 230.7 140 77.1
Phvul.006G095000 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 9.0e-59 230.3 138 79.7
VMungo0540G0500 Vigna mungo HOM05D002930 ORTHO05D003283 1.5e-58 229.6 138 79.7
PSO170G5253 Papaver somniferum HOM05D002930 ORTHO05D003283 2.0e-58 229.2 134 82.1
PSO302G0276 Papaver somniferum HOM05D002930 ORTHO05D003283 2.0e-58 229.2 134 82.1
CANSAT25G2793 Cannabis sativa HOM05D002930 ORTHO05D003283 1.7e-57 226.1 141 78.7
Nitab4.5_0001323g0140 Nicotiana tabacum HOM05D002930 ORTHO05D003283 2.9e-57 225.3 122 86.9
Manes.09G162700 Manihot esculenta HOM05D002930 ORTHO05D003283 1.4e-56 223.0 134 82.1
DCAR_022250 Daucus carota HOM05D002930 ORTHO05D003283 2.5e-56 222.2 136 77.2
TAR375G0113 Trochodendron aralioides HOM05D002930 ORTHO05D003283 1.2e-55 219.9 142 76.8
Lj9C680G12 Lonicera japonica HOM05D002930 ORTHO05D003283 3.9e-54 214.9 194 58.2
Dinv40246 Davidia involucrata HOM05D002930 ORTHO05D003283 6.7e-54 214.2 122 83.6
Mapoly0023s0171 Marchantia polymorpha HOM05D002930 ORTHO05D003283 6.5e-49 197.6 141 66.0
Pp3c9_13300 Physcomitrium patens HOM05D002930 ORTHO05D003283 1.4e-48 196.4 140 67.9
AagrBONN_evm.TU.Sc2ySwM_228.583 Anthoceros agrestis HOM05D002930 ORTHO05D003283 4.2e-48 194.9 146 63.0
SEGI_00362 Sequoiadendron giganteum HOM05D002930 ORTHO05D003283 7.2e-48 194.1 126 73.0
Pp3c3_17170 Physcomitrium patens HOM05D002930 ORTHO05D003283 6.1e-47 191.0 141 66.0
Lsat_1_v5_gn_9_1821 Lactuca sativa HOM05D002930 ORTHO05D003283 3.3e-45 185.3 93 94.6
MBI19_g46385_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 4.4e-45 184.9 94 92.6
Prupe.2G260500 Prunus persica HOM05D002930 ORTHO05D003283 2.2e-44 182.6 107 81.3
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 8.2e-44 180.6 120 71.7
SMO142G0015 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 6.7e-38 161.0 138 60.1
CBR_g45306 Chara braunii HOM05D002930 ORTHO05D000002 9.7e-37 157.1 129 58.1
Cpa.g.sc9.131 Carica papaya HOM05D002930 ORTHO05D003283 2.8e-36 155.6 96 77.1
Cre09.g402108 Chlamydomonas reinhardtii HOM05D002930 ORTHO05D003283 3.8e-25 118.6 100 56.0
PGSC0003DMG400028939 Solanum tuberosum HOM05D002930 ORTHO05D003283 3.8e-09 65.5 48 62.5
Psat3g009520 Pisum sativum HOM05D002930 ORTHO05D003283 2.8e-07 59.3 47 57.4


User provided reference genes

Program Settings