Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A355T5 Lonicera japonica HOM05D006682 ORTHO05D008627 4.4e-147 524.6 270 100.0
Dinv36276 Davidia involucrata HOM05D006682 ORTHO05D008627 1.9e-105 386.3 260 76.9
Hma1.2p1_0401F.1_g144700 Hydrangea macrophylla HOM05D006682 ORTHO05D008627 3.4e-91 339.0 254 75.2
MD03G1024200 Malus domestica HOM05D006682 ORTHO05D008627 4.5e-91 338.6 260 71.2
Manes.06G166600 Manihot esculenta HOM05D006682 ORTHO05D008627 1.1e-89 334.0 263 70.0
CSS0008647 Camellia sinensis var. sinensis HOM05D006682 ORTHO05D008627 1.2e-88 330.5 269 69.5
Lsat_1_v5_gn_8_74980 Lactuca sativa HOM05D006682 ORTHO05D008627 2.1e-88 329.7 267 65.9
Cpa.g.sc21.74 Carica papaya HOM05D006682 ORTHO05D008627 2.7e-88 329.3 264 69.7
Haze_23101 Corylus avellana HOM05D006682 ORTHO05D008627 3.5e-88 328.9 254 70.1
FAN11G1823 Fragaria x ananassa HOM05D006682 ORTHO05D008627 4.6e-88 328.6 274 67.5
Cfa009742 Carpinus fangiana HOM05D006682 ORTHO05D008627 7.9e-88 327.8 254 70.5
FAN21G3201 Fragaria x ananassa HOM05D006682 ORTHO05D008627 1.0e-87 327.4 275 68.0
FAN25G2895 Fragaria x ananassa HOM05D006682 ORTHO05D008627 1.0e-87 327.4 270 68.9
MD11G1029300 Malus domestica HOM05D006682 ORTHO05D008627 1.3e-87 327.0 261 68.6
RcHm_v2.0_Chr5g0077121 Rosa chinensis HOM05D006682 ORTHO05D008627 1.3e-87 327.0 272 68.0
Thecc.05G010600 Theobroma cacao HOM05D006682 ORTHO05D008627 2.3e-87 326.2 260 69.2
Duzib128G1702 Durio zibethinus HOM05D006682 ORTHO05D008627 3.9e-87 325.5 257 68.1
Ciclev10012386m.g Citrus clementina HOM05D006682 ORTHO05D008627 8.7e-87 324.3 267 64.0
FAN16G2773 Fragaria x ananassa HOM05D006682 ORTHO05D008627 8.7e-87 324.3 269 66.9
FvH4_3g43060 Fragaria vesca HOM05D006682 ORTHO05D008627 1.9e-86 323.2 269 68.0
Aa31sc655G20 Aethionema arabicum HOM05D006682 ORTHO05D008627 2.5e-86 322.8 194 83.5
CARHR161420 Cardamine hirsuta HOM05D006682 ORTHO05D008627 2.5e-86 322.8 244 68.9
COL.COLO4_14494 Corchorus olitorius HOM05D006682 ORTHO05D008627 2.5e-86 322.8 256 68.4
PGR102G2323 Punica granatum HOM05D006682 ORTHO05D008627 2.5e-86 322.8 272 66.9
Sp5g10480 Schrenkiella parvula HOM05D006682 ORTHO05D008627 2.5e-86 322.8 254 68.1
A09p44960 Brassica napus HOM05D006682 ORTHO05D008627 7.4e-86 321.2 264 67.0
BraA09t39955Z Brassica rapa HOM05D006682 ORTHO05D008627 7.4e-86 321.2 264 67.0
THA.LOC104807019 Tarenaya hassleriana HOM05D006682 ORTHO05D008627 7.4e-86 321.2 267 64.0
BcaB01g00476 Brassica carinata HOM05D006682 ORTHO05D008627 9.7e-86 320.9 248 68.5
BolC8t50319H Brassica oleracea HOM05D006682 ORTHO05D008627 9.7e-86 320.9 248 68.5
Eucgr.B03679 Eucalyptus grandis HOM05D006682 ORTHO05D008627 9.7e-86 320.9 194 83.5
Prupe.6G023600 Prunus persica HOM05D006682 ORTHO05D008627 1.3e-85 320.5 260 67.3
BcaB01g00416 Brassica carinata HOM05D006682 ORTHO05D008627 1.6e-85 320.1 232 70.7
C08p27040 Brassica napus HOM05D006682 ORTHO05D008627 1.6e-85 320.1 248 68.5
TAR623G0396 Trochodendron aralioides HOM05D006682 ORTHO05D008627 2.2e-85 319.7 266 66.9
Thhalv10010653m.g Eutrema salsugineum HOM05D006682 ORTHO05D008627 3.7e-85 318.9 268 65.3
AL5G32250 Arabidopsis lyrata HOM05D006682 ORTHO05D008627 4.8e-85 318.5 243 69.1
TWI38G0692 Tripterygium wilfordii HOM05D006682 ORTHO05D008627 6.3e-85 318.2 264 67.0
Gohir.D01G218300 Gossypium hirsutum HOM05D006682 ORTHO05D008627 8.2e-85 317.8 221 75.6
Gorai.002G265000 Gossypium raimondii HOM05D006682 ORTHO05D008627 8.2e-85 317.8 221 75.6
AT3G51790 Arabidopsis thaliana HOM05D006682 ORTHO05D008627 1.4e-84 317.0 247 67.2
Gohir.A01G228400 Gossypium hirsutum HOM05D006682 ORTHO05D008627 1.8e-84 316.6 221 76.0
TAR623G0191 Trochodendron aralioides HOM05D006682 ORTHO05D008627 1.8e-84 316.6 266 66.9
CiPaw.13G163300 Carya illinoinensis HOM05D006682 ORTHO05D008627 3.1e-84 315.8 257 67.3
Rhsim13G0223700 Rhododendron simsii HOM05D006682 ORTHO05D008627 3.1e-84 315.8 260 67.7
Lalb_Chr08g0245621 Lupinus albus HOM05D006682 ORTHO05D008627 4.1e-84 315.5 271 66.1
Actinidia16314 Actinidia chinensis HOM05D006682 ORTHO05D008627 6.9e-84 314.7 264 65.2
ClCG03G013350 Citrullus lanatus HOM05D006682 ORTHO05D008627 1.5e-83 313.5 261 68.2
QL01p005270 Quercus lobata HOM05D006682 ORTHO05D008627 4.5e-83 312.0 258 67.8
Cpa.g.sc12.111 Carica papaya HOM05D006682 ORTHO05D008627 5.9e-83 311.6 252 69.0
CANSAT80G0450 Cannabis sativa HOM05D006682 ORTHO05D008627 1.0e-82 310.8 216 73.6
arahy.Tifrunner.gnm1.ann1.1N3H6Z Arachis hypogaea HOM05D006682 ORTHO05D008627 2.9e-82 309.3 275 64.0
Lj3g0017048 Lotus japonicus HOM05D006682 ORTHO05D008627 3.8e-82 308.9 272 63.6
Nn3g18894 Nelumbo nucifera HOM05D006682 ORTHO05D008627 3.8e-82 308.9 196 79.1
arahy.Tifrunner.gnm1.ann1.11YZMF Arachis hypogaea HOM05D006682 ORTHO05D008627 8.5e-82 307.8 275 64.0
Lj3P268T21 Lonicera japonica HOM05D006682 ORTHO05D008627 1.9e-81 306.6 167 95.8
MELO3C015204.2 Cucumis melo HOM05D006682 ORTHO05D008627 5.5e-81 305.1 260 65.4
CsaV3_1G042700 Cucumis sativus L. HOM05D006682 ORTHO05D008627 9.4e-81 304.3 260 65.4
ECA233G5908 Erigeron canadensis HOM05D006682 ORTHO05D008627 1.6e-80 303.5 241 67.2
Glyma.12G056800 Glycine max HOM05D006682 ORTHO05D008627 1.6e-80 303.5 230 71.7
Glyma.11G132200 Glycine max HOM05D006682 ORTHO05D008627 2.1e-80 303.1 223 72.2
EL10Ac3g05849 Beta vulgaris HOM05D006682 ORTHO05D008627 6.1e-80 301.6 269 65.4
Sabra03G0151700 Salix brachista HOM05D006682 ORTHO05D008627 7.9e-80 301.2 241 68.9
VMungo1127G1130 Vigna mungo HOM05D006682 ORTHO05D008627 6.7e-79 298.1 195 79.0
Sed0028089 Sechium edule HOM05D006682 ORTHO05D008627 3.3e-78 295.8 257 64.2
Aqoxy2G00055 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 1.3e-77 293.9 257 64.2
Potri.003G205200 Populus trichocarpa HOM05D006682 ORTHO05D008627 2.2e-77 293.1 254 64.2
CDE03G0115 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 4.8e-77 292.0 251 59.0
Phvul.011G058400 Phaseolus vulgaris HOM05D006682 ORTHO05D008627 4.8e-77 292.0 193 76.7
CDE04G1557 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 8.2e-77 291.2 196 69.9
Sc16g0009700 Simmondsia chinensis HOM05D006682 ORTHO05D008627 8.2e-77 291.2 205 74.6
Migut.O00578 Erythranthe guttata HOM05D006682 ORTHO05D008627 1.1e-76 290.8 274 60.2
MBI13_g31544_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 1.4e-76 290.4 240 65.4
Psat7g213040 Pisum sativum HOM05D006682 ORTHO05D008627 2.4e-76 289.7 275 61.8
Ca_20573_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 5.3e-76 288.5 255 62.0
Ca_30508_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 5.3e-76 288.5 255 62.0
MSTRG.18416 Avicennia marina HOM05D006682 ORTHO05D008627 9.1e-76 287.7 276 58.0
Ah.13g066750 Amaranthus hybridus HOM05D006682 ORTHO05D008627 1.2e-75 287.3 235 66.0
CAN.G350.11 Capsicum annuum HOM05D006682 ORTHO05D008627 2.6e-75 286.2 273 59.3
Cc00_g20370 Coffea canephora HOM05D006682 ORTHO05D008627 3.4e-75 285.8 228 66.7
Nitab4.5_0002026g0020 Nicotiana tabacum HOM05D006682 ORTHO05D008627 3.4e-75 285.8 268 60.8
ATR0605G320 Amborella trichopoda HOM05D006682 ORTHO05D008627 4.5e-75 285.4 263 61.2
Medtr4g065610 Medicago truncatula HOM05D006682 ORTHO05D008627 1.0e-74 284.3 269 59.1
Solyc09g005870.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 1.3e-74 283.9 242 64.0
Sopen03g006750 Solanum pennellii HOM05D006682 ORTHO05D008627 1.3e-74 283.9 273 59.3
Solyc03g033990.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 2.9e-74 282.7 273 59.3
PGSC0003DMG400023913 Solanum tuberosum HOM05D006682 ORTHO05D008627 3.8e-74 282.3 243 63.8
SHI11277 Sapria himalayana HOM05D006682 ORTHO05D008627 5.0e-74 282.0 219 65.8
Sopen09g001750 Solanum pennellii HOM05D006682 ORTHO05D008627 5.0e-74 282.0 242 64.0
PGSC0003DMG400009816 Solanum tuberosum HOM05D006682 ORTHO05D008627 9.4e-73 277.7 273 58.6
SGA_v2.0_scaffold42G16114 Striga asiatica HOM05D006682 ORTHO05D008627 2.7e-72 276.2 275 58.5
DCAR_014742 Daucus carota HOM05D006682 ORTHO05D008627 1.8e-71 273.5 177 76.8
SalBow8G0417 Salvia bowleyana HOM05D006682 ORTHO05D008627 1.8e-71 273.5 212 68.9
SalBow5G1085 Salvia bowleyana HOM05D006682 ORTHO05D008627 2.3e-71 273.1 290 56.9
Manes.14G001136 Manihot esculenta HOM05D006682 ORTHO05D008627 3.0e-71 272.7 262 61.1
HPP92_017841 Vanilla planifolia HOM05D006682 ORTHO05D008627 5.1e-71 271.9 270 57.4
Os10g0545800 Oryza sativa ssp. japonica HOM05D006682 ORTHO05D008627 8.8e-71 271.2 188 70.7
PSO384G2735 Papaver somniferum HOM05D006682 ORTHO05D008627 1.7e-69 266.9 235 60.0
PSO339G5979 Papaver somniferum HOM05D006682 ORTHO05D008627 1.4e-68 263.8 236 58.9
SGA_v2.0_scaffold4G02325 Striga asiatica HOM05D006682 ORTHO05D008627 1.7e-66 256.9 268 56.3
AUR62015492 Chenopodium quinoa HOM05D006682 ORTHO05D008627 5.0e-66 255.4 212 68.9
Zm00001eb022720 Zea mays HOM05D006682 ORTHO05D008627 8.5e-66 254.6 234 59.0
TPR.G35025 Trifolium pratense HOM05D006682 ORTHO05D008627 1.6e-64 250.4 270 54.4
Zm00001eb394030 Zea mays HOM05D006682 ORTHO05D008627 2.1e-64 250.0 228 59.6
SEGI_12993 Sequoiadendron giganteum HOM05D006682 ORTHO05D008627 4.8e-61 238.8 171 66.7
Psat7g244600 Pisum sativum HOM05D006682 ORTHO05D008627 2.2e-58 229.9 222 58.6
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 1.1e-57 227.6 150 80.0
HanXRQChr17g0534121 Helianthus annuus HOM05D006682 ORTHO05D008627 2.7e-56 223.0 187 63.1
unitig_26.g10134 Utricularia gibba HOM05D006682 ORTHO05D008627 6.1e-56 221.9 260 50.4
Mapoly0003s0021 Marchantia polymorpha HOM05D006682 ORTHO05D008627 3.0e-55 219.5 209 54.5
Pp3c14_20080 Physcomitrium patens HOM05D006682 ORTHO05D008627 6.8e-55 218.4 187 57.2
Nitab4.5_0000492g0110 Nicotiana tabacum HOM05D006682 ORTHO05D008627 2.0e-30 137.1 108 67.6
Carub.0005s1814 Capsella rubella HOM05D006682 ORTHO05D008627 1.9e-28 130.6 118 58.5
GSVIVG01025303001 Vitis vinifera HOM05D006682 ORTHO05D008627 1.2e-24 117.9 99 64.6
EL10Ac6g14324 Beta vulgaris HOM05D006682 ORTHO05D007363 6.4e-21 105.5 93 60.2
CBR_g49935 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-15 87.8 135 40.7
CBR_g49937 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-15 87.4 233 29.2
MBI13_g31542_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 3.1e-15 86.7 71 59.2
Actinidia06890 Actinidia chinensis HOM05D006682 ORTHO05D054450 3.2e-12 76.6 103 46.6
Peaxi162Scf00029g00296 Petunia axillaris HOM05D006682 ORTHO05D008627 2.5e-09 67.0 52 65.4
Aqoxy4G00577 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 4.3e-09 66.2 50 64.0
MBI13_g31543_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 2.8e-08 63.5 105 41.0


User provided reference genes

Program Settings