Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A335T67 Lonicera japonica HOM05D000621 ORTHO05D000421 9.3e-115 417.2 254 100.0
Lj1A14T72 Lonicera japonica HOM05D000621 ORTHO05D000421 5.0e-100 368.2 290 82.4
Lj8C411T12 Lonicera japonica HOM05D032877 ORTHO05D000421 8.0e-74 281.2 247 68.4
Dinv10127 Davidia involucrata HOM05D000324 ORTHO05D001014 4.3e-35 152.5 285 38.2
Hma1.2p1_0965F.1_g242100 Hydrangea macrophylla HOM05D000621 ORTHO05D000421 1.5e-32 144.1 284 40.8
Dinv33142 Davidia involucrata HOM05D000621 ORTHO05D000421 3.8e-31 139.4 285 35.4
Lj2A1210T30 Lonicera japonica HOM05D000621 ORTHO05D000421 9.9e-24 114.8 283 35.7
Actinidia31344 Actinidia chinensis HOM05D000621 ORTHO05D000421 1.3e-23 114.4 290 30.3
Actinidia20974 Actinidia chinensis HOM05D000621 ORTHO05D000421 4.2e-22 109.4 244 32.8
CSS0010554 Camellia sinensis var. sinensis HOM05D000621 ORTHO05D000421 7.1e-22 108.6 302 33.1
Actinidia20973 Actinidia chinensis HOM05D000621 ORTHO05D000421 4.6e-21 105.9 266 32.7
GSVIVG01028157001 Vitis vinifera HOM05D000621 ORTHO05D000421 6.0e-21 105.5 275 30.5
MSTRG.18079 Avicennia marina HOM05D000621 ORTHO05D000421 7.8e-21 105.1 124 45.2
PGSC0003DMG400009053 Solanum tuberosum HOM05D000621 ORTHO05D000421 7.8e-21 105.1 270 30.0
DCAR_002907 Daucus carota HOM05D000621 ORTHO05D000421 3.9e-20 102.8 276 29.7
CiPaw.07G120400 Carya illinoinensis HOM05D000621 ORTHO05D000421 8.7e-20 101.7 205 34.1
Solyc01g079230.4 Solanum lycopersicum HOM05D000621 ORTHO05D000421 8.7e-20 101.7 270 29.3
Sopen01g031010 Solanum pennellii HOM05D000621 ORTHO05D000421 1.1e-19 101.3 270 29.3
Oeu038046.1 Olea europaea HOM05D000621 ORTHO05D000421 5.6e-19 99.0 248 31.9
CAN.G293.6 Capsicum annuum HOM05D000621 ORTHO05D000421 2.1e-18 97.1 274 28.1
Oeu056549.1 Olea europaea HOM05D000621 ORTHO05D000421 2.1e-18 97.1 266 28.9
Peaxi162Scf00770g00127 Petunia axillaris HOM05D000621 ORTHO05D000421 4.8e-18 95.9 174 35.6
Oeu008487.1 Olea europaea HOM05D000621 ORTHO05D000421 6.2e-18 95.5 128 41.4
Dinv36792 Davidia involucrata HOM05D000621 ORTHO05D000421 1.1e-17 94.7 144 43.1
Oeu048873.1 Olea europaea HOM05D000621 ORTHO05D000421 1.4e-17 94.4 311 27.3
SGA_v2.0_scaffold376G50304 Striga asiatica HOM05D000621 ORTHO05D000421 1.4e-17 94.4 145 41.4
Cc01_g21650 Coffea canephora HOM05D000621 ORTHO05D000421 5.3e-17 92.4 288 28.5
CiPaw.08G086900 Carya illinoinensis HOM05D000621 ORTHO05D000421 2.6e-16 90.1 158 36.1
Nitab4.5_0007983g0010 Nicotiana tabacum HOM05D000621 ORTHO05D000421 1.7e-15 87.4 276 27.5
Hund09661 Selenicereus undatus HOM05D000621 ORTHO05D000421 6.4e-15 85.5 296 30.7
HanXRQChr06g0168081 Helianthus annuus HOM05D000621 ORTHO05D000421 2.4e-14 83.6 272 29.8
ECA236G2303 Erigeron canadensis HOM05D000621 ORTHO05D000421 3.2e-14 83.2 248 29.0
Haze_05080 Corylus avellana HOM05D000621 ORTHO05D000421 4.2e-14 82.8 290 27.2
Nitab4.5_0000222g0110 Nicotiana tabacum HOM05D000621 ORTHO05D000421 5.4e-14 82.4 276 26.8
Manes.01G230800 Manihot esculenta HOM05D000621 ORTHO05D000421 7.1e-14 82.0 129 40.3
Ciclev10018775m.g Citrus clementina HOM05D000621 ORTHO05D000421 1.2e-13 81.3 133 39.8
Migut.E00558 Erythranthe guttata HOM05D000621 ORTHO05D000421 1.6e-13 80.9 140 35.7
Cfa005755 Carpinus fangiana HOM05D000621 ORTHO05D000421 2.7e-13 80.1 288 26.4
SGA_v2.0_scaffold334G49092 Striga asiatica HOM05D000621 ORTHO05D000421 2.7e-13 80.1 145 41.4
CSS0001187 Camellia sinensis var. sinensis HOM05D000621 ORTHO05D000421 3.5e-13 79.7 302 25.8
Potri.002G192300 Populus trichocarpa HOM05D000621 ORTHO05D000421 1.8e-12 77.4 283 26.1
FAN28G1859 Fragaria x ananassa HOM05D000621 ORTHO05D000421 3.0e-12 76.6 119 37.8
HanXRQChr15g0465111 Helianthus annuus HOM05D000621 ORTHO05D000421 3.0e-12 76.6 246 27.2
FAN23G0943 Fragaria x ananassa HOM05D000621 ORTHO05D000421 5.1e-12 75.9 119 37.0
HanXRQChr04g0106261 Helianthus annuus HOM05D000621 ORTHO05D000421 5.1e-12 75.9 189 38.1
Prupe.3G007100 Prunus persica HOM05D000621 ORTHO05D000421 8.7e-12 75.1 246 24.8
RcHm_v2.0_Chr3g0487021 Rosa chinensis HOM05D000621 ORTHO05D000421 8.7e-12 75.1 119 36.1
FAN26G2638 Fragaria x ananassa HOM05D000621 ORTHO05D000421 1.5e-11 74.3 119 37.0
Sabra02G0163600 Salix brachista HOM05D000621 ORTHO05D000421 1.5e-11 74.3 281 26.7
Thecc.04G160500 Theobroma cacao HOM05D000621 ORTHO05D000421 1.9e-11 73.9 191 27.2
MD17G1278800 Malus domestica HOM05D000621 ORTHO05D000421 2.5e-11 73.6 255 26.7
SalBow3G2875 Salvia bowleyana HOM05D000621 ORTHO05D000421 2.5e-11 73.6 112 41.1
Atru.chr5.946 Acer truncatum HOM05D000621 ORTHO05D000421 4.3e-11 72.8 134 34.3
COL.COLO4_23190 Corchorus olitorius HOM05D000662 ORTHO05D000421 7.4e-11 72.0 103 39.8
FvH4_1g26800 Fragaria vesca HOM05D000621 ORTHO05D000421 9.6e-11 71.6 246 24.8
FAN19G2659 Fragaria x ananassa HOM05D000621 ORTHO05D000421 9.6e-11 71.6 246 24.8
MD09G1286400 Malus domestica HOM05D000621 ORTHO05D000421 9.6e-11 71.6 281 25.3
QL12p018838 Quercus lobata HOM05D000621 ORTHO05D000421 9.6e-11 71.6 71 47.9
Actinidia31382 Actinidia chinensis HOM05D000621 ORTHO05D000421 1.3e-10 71.2 138 31.9
Cpa.g.c32331 Carica papaya HOM05D000621 ORTHO05D000421 2.8e-10 70.1 103 38.8
AUR62011757 Chenopodium quinoa HOM05D000621 ORTHO05D000421 2.8e-10 70.1 317 20.8
Gohir.A08G120300 Gossypium hirsutum HOM05D000621 ORTHO05D000421 2.8e-10 70.1 102 39.2
Gohir.D08G141200 Gossypium hirsutum HOM05D000621 ORTHO05D000421 2.8e-10 70.1 102 39.2
Gorai.004G145200 Gossypium raimondii HOM05D000621 ORTHO05D000421 2.8e-10 70.1 102 39.2
DCAR_005738 Daucus carota HOM05D000621 ORTHO05D000421 3.6e-10 69.7 284 27.5
Actinidia33024 Actinidia chinensis HOM05D000621 ORTHO05D000421 4.8e-10 69.3 182 26.9
Thecc.01G318600 Theobroma cacao HOM05D000621 ORTHO05D000421 4.8e-10 69.3 119 34.5
Ah.11g049120 Amaranthus hybridus HOM05D000621 ORTHO05D000421 8.1e-10 68.6 181 30.4
Duzib211G0322 Durio zibethinus HOM05D000621 ORTHO05D000421 1.1e-09 68.2 120 36.7
ClCG09G004910 Citrullus lanatus HOM05D000621 ORTHO05D000421 1.4e-09 67.8 126 32.5
Nitab4.5_0004105g0010 Nicotiana tabacum HOM05D000621 ORTHO05D000421 1.4e-09 67.8 140 32.9
unitig_0.g288 Utricularia gibba HOM05D000621 ORTHO05D000421 1.4e-09 67.8 118 33.9
FvH4_7g26480 Fragaria vesca HOM05D000621 ORTHO05D000421 2.4e-09 67.0 94 37.2
FAN06G4196 Fragaria x ananassa HOM05D000621 ORTHO05D000421 2.4e-09 67.0 94 37.2
Nitab4.5_0004104g0100 Nicotiana tabacum HOM05D000621 ORTHO05D000421 2.4e-09 67.0 219 27.9
Potri.014G117800 Populus trichocarpa HOM05D000621 ORTHO05D000421 2.4e-09 67.0 140 34.3
Lsat_1_v5_gn_8_167620 Lactuca sativa HOM05D000621 ORTHO05D000421 3.1e-09 66.6 172 30.8
Lsat_1_v5_gn_8_76680 Lactuca sativa HOM05D000621 ORTHO05D000421 3.1e-09 66.6 246 25.6
CANSAT64G2764 Cannabis sativa HOM05D000621 ORTHO05D000421 4.0e-09 66.2 158 30.4
Duzib138G1699 Durio zibethinus HOM05D000621 ORTHO05D000421 9.0e-09 65.1 134 32.8
RcHm_v2.0_Chr1g0373071 Rosa chinensis HOM05D000621 ORTHO05D000421 9.0e-09 65.1 278 27.3
TWI14G0775 Tripterygium wilfordii HOM05D000621 ORTHO05D000421 9.0e-09 65.1 179 29.6
Rhsim02G0162900 Rhododendron simsii HOM05D000621 ORTHO05D000421 1.2e-08 64.7 115 32.2
Duzib133G0686 Durio zibethinus HOM05D000621 ORTHO05D000421 1.5e-08 64.3 119 35.3
TWI59G0701 Tripterygium wilfordii HOM05D000621 ORTHO05D000421 1.5e-08 64.3 154 32.5
FAN06G4464 Fragaria x ananassa HOM05D000621 ORTHO05D000421 2.0e-08 63.9 193 26.9
MELO3C015906.2 Cucumis melo HOM05D000621 ORTHO05D000421 2.6e-08 63.5 126 30.2
Aqoxy6G00423 Aquilegia oxysepala HOM05D000621 ORTHO05D000421 3.4e-08 63.2 64 50.0
RcHm_v2.0_Chr1g0373061 Rosa chinensis HOM05D000621 ORTHO05D000421 3.4e-08 63.2 194 26.8
Sed0001192 Sechium edule HOM05D000621 ORTHO05D000421 4.5e-08 62.8 142 31.7
Ah.11g049100 Amaranthus hybridus HOM05D000621 ORTHO05D000421 7.6e-08 62.0 147 30.6
EL10As5g23608 Beta vulgaris HOM05D000621 ORTHO05D000421 7.6e-08 62.0 190 25.8
CsaV3_7G030170 Cucumis sativus L. HOM05D000621 ORTHO05D000421 7.6e-08 62.0 75 41.3
Aqoxy6G00422 Aquilegia oxysepala HOM05D000621 ORTHO05D000421 9.9e-08 61.6 54 59.3
AUR62024603 Chenopodium quinoa HOM05D000621 ORTHO05D000421 9.9e-08 61.6 322 25.8
Sed0018754 Sechium edule HOM05D000621 ORTHO05D000421 1.7e-07 60.8 108 32.4
Aa31LG1G28530 Aethionema arabicum HOM05D000621 ORTHO05D000421 2.2e-07 60.5 120 31.7
Aa31LG10G16240 Aethionema arabicum HOM05D000621 ORTHO05D000421 2.9e-07 60.1 115 38.3
Aqoxy2G02639 Aquilegia oxysepala HOM05D000621 ORTHO05D000421 2.9e-07 60.1 72 36.1
FAN03G3413 Fragaria x ananassa HOM05D000621 ORTHO05D000421 2.9e-07 60.1 87 37.9
Aqoxy6G00295 Aquilegia oxysepala HOM05D000621 ORTHO05D000421 3.8e-07 59.7 54 51.9
Lsat_1_v5_gn_0_17081 Lactuca sativa HOM05D000621 ORTHO05D000421 3.8e-07 59.7 186 25.8
Lsat_1_v5_gn_1_115540 Lactuca sativa HOM05D000621 ORTHO05D000421 3.8e-07 59.7 102 39.2
Manes.09G186900 Manihot esculenta HOM05D000621 ORTHO05D000421 3.8e-07 59.7 213 24.9
Prupe.3G124100 Prunus persica HOM05D000621 ORTHO05D000421 3.8e-07 59.7 152 28.9
PGR142G3473 Punica granatum HOM05D000621 ORTHO05D000421 3.8e-07 59.7 119 28.6
Thhalv10005813m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 8.4e-07 58.5 129 28.7
Ah.11g049110 Amaranthus hybridus HOM05D000621 ORTHO05D000421 1.4e-06 57.8 127 32.3
BcaC07g40715 Brassica carinata HOM05D000621 ORTHO05D000421 1.4e-06 57.8 52 48.1
C08p37180 Brassica napus HOM05D000621 ORTHO05D000421 1.4e-06 57.8 52 48.1
BolC8t51295H Brassica oleracea HOM05D000621 ORTHO05D000421 1.4e-06 57.8 52 48.1
PGR142G0834 Punica granatum HOM05D000621 ORTHO05D000421 2.4e-06 57.0 66 39.4
AT2G47220 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 3.2e-06 56.6 74 39.2
CARHR142620 Cardamine hirsuta HOM05D000621 ORTHO05D000421 3.2e-06 56.6 124 33.1
AL2G23500 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 4.2e-06 56.2 134 30.6
AT3G62300 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 4.2e-06 56.2 131 29.8
A09p54300 Brassica napus HOM05D000621 ORTHO05D000421 4.2e-06 56.2 84 38.1
BraA09t40842Z Brassica rapa HOM05D000621 ORTHO05D000421 4.2e-06 56.2 52 46.2
Prupe.2G061600 Prunus persica HOM05D000621 ORTHO05D000421 4.2e-06 56.2 272 22.8
CAN.G1389.26 Capsicum annuum HOM05D000621 ORTHO05D000421 5.5e-06 55.8 60 40.0
Aqoxy1G01444 Aquilegia oxysepala HOM05D000621 ORTHO05D000421 7.1e-06 55.5 44 56.8
Aqoxy2G02637 Aquilegia oxysepala HOM05D000621 ORTHO05D000421 7.1e-06 55.5 219 21.9
Nitab4.5_0009783g0050 Nicotiana tabacum HOM05D000621 ORTHO05D012657 7.1e-06 55.5 65 40.0
Sopen03g040460 Solanum pennellii HOM05D000621 ORTHO05D000421 7.1e-06 55.5 83 34.9
vmacro16895 Vaccinium macrocarpon HOM05D000621 ORTHO05D000421 7.1e-06 55.5 221 24.4
AL5G45060 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 9.3e-06 55.1 132 28.8
AL6G35050 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 9.3e-06 55.1 70 40.0
BcaC07g42742 Brassica carinata HOM05D000621 ORTHO05D000421 9.3e-06 55.1 145 30.3
CANSAT78G0069 Cannabis sativa HOM05D000621 ORTHO05D000421 9.3e-06 55.1 84 36.9
Nitab4.5_0001295g0110 Nicotiana tabacum HOM05D000621 ORTHO05D000421 9.3e-06 55.1 61 37.7
Nitab4.5_0010788g0040 Nicotiana tabacum HOM05D000621 ORTHO05D000421 9.3e-06 55.1 65 35.4
THA.LOC104817448 Tarenaya hassleriana HOM05D000621 ORTHO05D000421 9.3e-06 55.1 61 39.3


User provided reference genes

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