Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A297G57 Lonicera japonica HOM05D005534 ORTHO05D006642 1.2e-46 189.5 98 100.0
Nn1g07947 Nelumbo nucifera HOM05D005534 ORTHO05D006642 1.8e-37 159.1 92 84.8
Nitab4.5_0006008g0020 Nicotiana tabacum HOM05D005534 ORTHO05D006642 3.0e-37 158.3 88 87.5
Hund26700 Selenicereus undatus HOM05D005534 ORTHO05D006642 3.9e-37 157.9 90 85.6
Atru.chr13.2420 Acer truncatum HOM05D005534 ORTHO05D006642 5.1e-37 157.5 89 86.5
Cpa.g.sc438.5 Carica papaya HOM05D005534 ORTHO05D006642 5.1e-37 157.5 89 85.4
Dinv18373 Davidia involucrata HOM05D005534 ORTHO05D006642 5.1e-37 157.5 91 87.9
Thhalv10007396m.g Eutrema salsugineum HOM05D005534 ORTHO05D006642 5.1e-37 157.5 90 85.6
Peaxi162Scf00065g00017 Petunia axillaris HOM05D005534 ORTHO05D006642 6.7e-37 157.1 88 86.4
THA.LOC104800087 Tarenaya hassleriana HOM05D005534 ORTHO05D006642 8.8e-37 156.8 87 88.5
Carub.0001s2231 Capsella rubella HOM05D005534 ORTHO05D006642 1.1e-36 156.4 86 89.5
CiPaw.04G011000 Carya illinoinensis HOM05D005534 ORTHO05D006642 1.1e-36 156.4 87 87.4
Migut.J01545 Erythranthe guttata HOM05D005534 ORTHO05D006642 1.1e-36 156.4 86 90.7
QL09p002970 Quercus lobata HOM05D005534 ORTHO05D006642 1.1e-36 156.4 89 85.4
QL09p004039 Quercus lobata HOM05D005534 ORTHO05D006642 1.1e-36 156.4 89 85.4
Nitab4.5_0000731g0130 Nicotiana tabacum HOM05D005534 ORTHO05D006642 1.5e-36 156.0 87 87.4
AL1G36350 Arabidopsis lyrata HOM05D005534 ORTHO05D006642 2.5e-36 155.2 86 89.5
Hma1.2p1_0708F.1_g207140 Hydrangea macrophylla HOM05D005534 ORTHO05D006642 2.5e-36 155.2 89 86.5
Manes.18G119700 Manihot esculenta HOM05D005534 ORTHO05D006642 2.5e-36 155.2 89 85.4
Potri.013G101700 Populus trichocarpa HOM05D005534 ORTHO05D006642 2.5e-36 155.2 89 85.4
GSVIVG01036434001 Vitis vinifera HOM05D005534 ORTHO05D006642 2.5e-36 155.2 87 88.5
Duzib177G1179 Durio zibethinus HOM05D005534 ORTHO05D006642 4.3e-36 154.5 89 84.3
MBI06_g06677_MAGBIO Magnolia biondii HOM05D005534 ORTHO05D006642 4.3e-36 154.5 89 84.3
RcHm_v2.0_Chr7g0231231 Rosa chinensis HOM05D005534 ORTHO05D006642 4.3e-36 154.5 87 87.4
Sp1g20290 Schrenkiella parvula HOM05D005534 ORTHO05D006642 4.3e-36 154.5 86 88.4
AT1G22800 Arabidopsis thaliana HOM05D005534 ORTHO05D006642 5.7e-36 154.1 86 88.4
ClCG08G000650 Citrullus lanatus HOM05D005534 ORTHO05D006642 5.7e-36 154.1 87 85.1
CsaV3_5G040210 Cucumis sativus L. HOM05D005534 ORTHO05D006642 5.7e-36 154.1 89 83.1
Duzib177G1161 Durio zibethinus HOM05D005534 ORTHO05D006642 5.7e-36 154.1 89 84.3
MD04G1240000 Malus domestica HOM05D005534 ORTHO05D006642 5.7e-36 154.1 87 87.4
PGSC0003DMG401019416 Solanum tuberosum HOM05D005534 ORTHO05D006642 5.7e-36 154.1 87 86.2
MD08G1215200 Malus domestica HOM05D005534 ORTHO05D006642 7.4e-36 153.7 87 87.4
Oeu034751.1 Olea europaea HOM05D005534 ORTHO05D006642 7.4e-36 153.7 91 83.5
Oeu034752.2 Olea europaea HOM05D005534 ORTHO05D006642 7.4e-36 153.7 91 83.5
Prupe.1G530500 Prunus persica HOM05D005534 ORTHO05D006642 7.4e-36 153.7 87 86.2
CARHR023160 Cardamine hirsuta HOM05D005534 ORTHO05D006642 9.7e-36 153.3 86 87.2
Gohir.D13G120700 Gossypium hirsutum HOM05D005534 ORTHO05D006642 9.7e-36 153.3 89 83.1
BcaNung06443 Brassica carinata HOM05D005534 ORTHO05D006642 1.3e-35 152.9 86 87.2
PGR044G1073 Punica granatum HOM05D005534 ORTHO05D006642 1.3e-35 152.9 89 84.3
TAR381G0138 Trochodendron aralioides HOM05D005534 ORTHO05D006642 1.3e-35 152.9 91 82.4
Haze_13929 Corylus avellana HOM05D005534 ORTHO05D006642 1.7e-35 152.5 98 82.7
MD15G1399100 Malus domestica HOM05D005534 ORTHO05D006642 1.7e-35 152.5 87 86.2
MSTRG.6297 Avicennia marina HOM05D005534 ORTHO05D006642 2.2e-35 152.1 89 85.4
COL.COLO4_05589 Corchorus olitorius HOM05D005534 ORTHO05D006642 2.2e-35 152.1 89 83.1
Glyma.04G257200 Glycine max HOM05D005534 ORTHO05D006642 2.2e-35 152.1 89 83.1
Glyma.12G242500 Glycine max HOM05D005534 ORTHO05D006642 2.2e-35 152.1 89 83.1
Solyc10g012160.3 Solanum lycopersicum HOM05D005534 ORTHO05D006642 2.2e-35 152.1 87 85.1
AUR62026718 Chenopodium quinoa HOM05D005534 ORTHO05D006642 2.8e-35 151.8 87 85.1
Phvul.005G001600 Phaseolus vulgaris HOM05D005534 ORTHO05D006642 2.8e-35 151.8 87 85.1
Rhsim12G0004300 Rhododendron simsii HOM05D005534 ORTHO05D006642 2.8e-35 151.8 88 85.2
BcaNung06107 Brassica carinata HOM05D005534 ORTHO05D006642 3.7e-35 151.4 86 86.0
Sabra13G0088100 Salix brachista HOM05D005534 ORTHO05D006642 3.7e-35 151.4 87 85.1
CSS0044704 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 4.8e-35 151.0 91 82.4
Lsat_1_v5_gn_5_78481 Lactuca sativa HOM05D005534 ORTHO05D006642 4.8e-35 151.0 89 84.3
Sopen10g005920 Solanum pennellii HOM05D005534 ORTHO05D006642 4.8e-35 151.0 87 83.9
Thecc.08G173200 Theobroma cacao HOM05D005534 ORTHO05D006642 4.8e-35 151.0 88 83.0
EL10Ac1g01529 Beta vulgaris HOM05D005534 ORTHO05D006642 6.3e-35 150.6 89 83.1
Ciclev10020832m.g Citrus clementina HOM05D005534 ORTHO05D006642 6.3e-35 150.6 91 83.5
FvH4_5g33060 Fragaria vesca HOM05D005534 ORTHO05D006642 6.3e-35 150.6 87 83.9
FAN18G2794 Fragaria x ananassa HOM05D005534 ORTHO05D006642 6.3e-35 150.6 87 83.9
TWI18G0032 Tripterygium wilfordii HOM05D005534 ORTHO05D006642 8.2e-35 150.2 91 81.3
Lj3g0019199 Lotus japonicus HOM05D005534 ORTHO05D006642 1.4e-34 149.4 91 82.4
Sc19g0002770 Simmondsia chinensis HOM05D005534 ORTHO05D006642 1.4e-34 149.4 89 80.9
vmacro00924 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 1.8e-34 149.1 89 82.0
VMungo1080G0932 Vigna mungo HOM05D005534 ORTHO05D006642 1.8e-34 149.1 87 82.8
SHI08987 Sapria himalayana HOM05D005534 ORTHO05D006642 2.4e-34 148.7 89 78.7
CAN.G911.34 Capsicum annuum HOM05D005534 ORTHO05D006642 3.1e-34 148.3 87 82.8
Cc00_g25290 Coffea canephora HOM05D005534 ORTHO05D006642 3.1e-34 148.3 88 81.8
ECA234G3974 Erigeron canadensis HOM05D005534 ORTHO05D006642 3.1e-34 148.3 86 83.7
CDE02G4760 Ceratophyllum demersum HOM05D005534 ORTHO05D006642 6.9e-34 147.1 89 79.8
Medtr3g005730 Medicago truncatula HOM05D005534 ORTHO05D006642 6.9e-34 147.1 87 81.6
SalBow6G6434 Salvia bowleyana HOM05D005534 ORTHO05D006642 6.9e-34 147.1 87 81.6
unitig_899.g15650 Utricularia gibba HOM05D005534 ORTHO05D006642 9.1e-34 146.7 88 81.8
Zm00001eb411080 Zea mays HOM05D005534 ORTHO05D006642 1.2e-33 146.4 86 81.4
CANSAT25G1380 Cannabis sativa HOM05D005534 ORTHO05D006642 1.5e-33 146.0 87 79.3
Lalb_Chr07g0177551 Lupinus albus HOM05D005534 ORTHO05D006642 1.5e-33 146.0 87 79.3
Eucgr.F04073 Eucalyptus grandis HOM05D005534 ORTHO05D006642 3.4e-33 144.8 87 83.9
TPR.G25542 Trifolium pratense HOM05D005534 ORTHO05D006642 3.4e-33 144.8 87 80.5
arahy.Tifrunner.gnm1.ann1.H1ATJ8 Arachis hypogaea HOM05D005534 ORTHO05D006642 4.5e-33 144.4 87 79.3
arahy.Tifrunner.gnm1.ann1.A8RPUL Arachis hypogaea HOM05D005534 ORTHO05D006642 5.9e-33 144.1 86 80.2
BcaC06g34996 Brassica carinata HOM05D005534 ORTHO05D006642 5.9e-33 144.1 96 77.1
C07p20870 Brassica napus HOM05D005534 ORTHO05D006642 5.9e-33 144.1 96 77.1
BolC7t42620H Brassica oleracea HOM05D005534 ORTHO05D006642 5.9e-33 144.1 96 77.1
Actinidia23022 Actinidia chinensis HOM05D005534 ORTHO05D006642 7.7e-33 143.7 95 80.0
PSO017G6214 Papaver somniferum HOM05D005534 ORTHO05D006642 1.0e-32 143.3 87 79.3
A09p41950 Brassica napus HOM05D005534 ORTHO05D006642 1.7e-32 142.5 98 75.5
HPP92_005621 Vanilla planifolia HOM05D005534 ORTHO05D006642 2.9e-32 141.7 89 76.4
HPP92_005624 Vanilla planifolia HOM05D005534 ORTHO05D006642 2.9e-32 141.7 89 76.4
Aqoxy2G03821 Aquilegia oxysepala HOM05D005534 ORTHO05D006642 6.5e-32 140.6 87 77.0
SGA_v2.0_scaffold69G23189 Striga asiatica HOM05D005534 ORTHO05D006642 1.9e-31 139.0 122 63.9
Gorai.013G134900 Gossypium raimondii HOM05D005534 ORTHO05D006642 2.5e-31 138.7 116 63.8
BraA09t39683Z Brassica rapa HOM05D005534 ORTHO05D006642 7.9e-30 133.7 98 73.5
BolC5t30885H Brassica oleracea HOM05D005534 ORTHO05D006642 1.1e-28 129.8 86 75.6
SMO232G0033 Selaginella moellendorffii HOM05D005534 ORTHO05D006642 8.2e-27 123.6 86 70.9
Mapoly0125s0040 Marchantia polymorpha HOM05D005534 ORTHO05D006642 7.0e-26 120.6 85 70.6
CBR_g29440 Chara braunii HOM05D000921 ORTHO05D004153 7.7e-25 117.1 85 64.7
MELO3C022197.2 Cucumis melo HOM05D005534 ORTHO05D006642 1.0e-24 116.7 67 82.1
Aa31LG7G6790 Aethionema arabicum HOM05D005534 ORTHO05D006642 1.3e-24 116.3 90 67.8
Pp3c3_32560 Physcomitrium patens HOM05D005534 ORTHO05D006642 5.0e-24 114.4 85 67.1
AUR62013571 Chenopodium quinoa HOM05D005534 ORTHO05D006642 1.1e-23 113.2 64 84.4
vmacro22753 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 5.5e-23 110.9 177 41.2
Lj1A290T42 Lonicera japonica HOM05D005534 ORTHO05D006642 6.7e-21 104.0 57 94.7
A07p14190 Brassica napus HOM05D005534 ORTHO05D006642 2.0e-20 102.4 100 62.0
Psat1g000160 Pisum sativum HOM05D005534 ORTHO05D006642 3.7e-19 98.2 58 82.8
DCAR_022334 Daucus carota HOM05D005534 ORTHO05D006642 1.2e-17 93.2 52 90.4
Gohir.A13G117400 Gossypium hirsutum HOM05D005534 ORTHO05D006642 3.5e-17 91.7 52 88.5
Lj1A290T43 Lonicera japonica HOM05D005534 ORTHO05D006642 2.2e-16 89.0 44 97.7
PSO170G0367 Papaver somniferum HOM05D005534 ORTHO05D006642 2.9e-16 88.6 55 78.2
HanXRQChr11g0339001 Helianthus annuus HOM05D005534 ORTHO05D006642 5.0e-16 87.8 55 80.0
Ca_13980_v3 Cicer arietinum L. HOM05D005534 ORTHO05D006642 8.5e-16 87.0 52 82.7
Gohir.A13G117500 Gossypium hirsutum HOM05D005534 ORTHO05D006642 5.5e-15 84.3 51 88.2
HPP92_005612 Vanilla planifolia HOM05D005534 ORTHO05D006642 1.0e-13 80.1 54 75.9
TPR.G30718 Trifolium pratense HOM05D005534 ORTHO05D006642 1.4e-13 79.7 87 52.9
Cre13.g584750 Chlamydomonas reinhardtii HOM05D005534 ORTHO05D006642 3.0e-13 78.6 126 40.5
PRCOL_00005850 Prasinoderma coloniale HOM05D005534 ORTHO05D006642 2.0e-12 75.9 88 50.0
Cfa025826 Carpinus fangiana HOM05D005534 ORTHO05D006642 1.8e-10 69.3 86 41.9
MCO12G480 Micromonas commoda HOM05D005534 ORTHO05D006642 1.6e-09 66.2 93 43.0
BraA07t29177Z Brassica rapa HOM05D005534 ORTHO05D006642 2.0e-09 65.9 36 83.3


User provided reference genes

Program Settings