Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A285T18 Lonicera japonica HOM05D007144 ORTHO05D008709 3.6e-45 184.5 91 100.0
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 3.6e-08 61.6 32 93.8
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 3.6e-08 61.6 32 93.8
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 4.7e-08 61.2 41 75.6
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 4.7e-08 61.2 32 96.9
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 4.7e-08 61.2 41 75.6
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 4.7e-08 61.2 45 71.1
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 1.4e-07 59.7 41 73.2
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 1.4e-07 59.7 41 73.2
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 1.8e-07 59.3 32 87.5
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 1.8e-07 59.3 32 90.6
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 1.8e-07 59.3 32 90.6
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 1.8e-07 59.3 32 90.6
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 3.0e-07 58.5 32 87.5
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 3.9e-07 58.2 32 87.5
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 3.9e-07 58.2 46 67.4
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 6.7e-07 57.4 32 84.4
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 6.7e-07 57.4 32 87.5
QL01p017309 Quercus lobata HOM05D007144 ORTHO05D008709 8.8e-07 57.0 32 87.5
GSVIVG01037268001 Vitis vinifera HOM05D007144 ORTHO05D008709 8.8e-07 57.0 32 87.5
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 1.1e-06 56.6 32 84.4
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 1.1e-06 56.6 32 87.5
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 1.5e-06 56.2 32 84.4
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 1.5e-06 56.2 37 78.4
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 2.0e-06 55.8 32 84.4
Dinv36172 Davidia involucrata HOM05D007144 ORTHO05D008709 2.0e-06 55.8 30 90.0
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 2.0e-06 55.8 32 84.4
Manes.01G179700 Manihot esculenta HOM05D007144 ORTHO05D008709 2.0e-06 55.8 32 87.5
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 2.0e-06 55.8 32 84.4
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 2.6e-06 55.5 32 81.2
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 2.6e-06 55.5 32 81.2
Nn7g36693 Nelumbo nucifera HOM05D007144 ORTHO05D008709 2.6e-06 55.5 32 81.2
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 2.6e-06 55.5 32 81.2
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 3.3e-06 55.1 32 84.4
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 3.3e-06 55.1 32 81.2
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 4.4e-06 54.7 32 81.2
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 4.4e-06 54.7 37 78.4
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 4.4e-06 54.7 37 78.4
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 4.4e-06 54.7 37 78.4
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 4.4e-06 54.7 31 87.1
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 5.7e-06 54.3 45 62.2
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 5.7e-06 54.3 45 62.2
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 5.7e-06 54.3 45 62.2
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 5.7e-06 54.3 32 81.2
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 5.7e-06 54.3 32 81.2
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 5.7e-06 54.3 32 81.2
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 7.4e-06 53.9 62 48.4
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 9.7e-06 53.5 32 81.2
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 9.7e-06 53.5 32 81.2
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 9.7e-06 53.5 32 81.2
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 9.7e-06 53.5 32 81.2
THA.LOC104799122 Tarenaya hassleriana HOM05D007144 ORTHO05D008709 9.7e-06 53.5 39 69.2


User provided reference genes

Program Settings