Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A271T7 Lonicera japonica HOM05D000685 ORTHO05D000511 3.0e-52 208.4 115 100.0
CSS0039309 Camellia sinensis var. sinensis HOM05D000685 ORTHO05D000511 4.5e-16 88.2 98 60.2
Cc01_g07860 Coffea canephora HOM05D000685 ORTHO05D000511 6.5e-15 84.3 98 58.2
Actinidia37055 Actinidia chinensis HOM05D000685 ORTHO05D000511 1.4e-14 83.2 98 59.2
Dinv18858 Davidia involucrata HOM05D000685 ORTHO05D000511 7.2e-14 80.9 98 56.1
Thecc.09G267900 Theobroma cacao HOM05D000685 ORTHO05D000511 2.7e-13 79.0 98 55.1
Duzib170G0787 Durio zibethinus HOM05D000685 ORTHO05D000511 3.6e-13 78.6 99 55.6
GSVIVG01037533001 Vitis vinifera HOM05D000685 ORTHO05D000511 3.6e-13 78.6 98 55.1
Potri.009G000100 Populus trichocarpa HOM05D000685 ORTHO05D000511 7.9e-13 77.4 98 53.1
Rhsim01G0199400 Rhododendron simsii HOM05D000685 ORTHO05D000511 1.0e-12 77.0 98 56.1
Solyc06g073920.3 Solanum lycopersicum HOM05D000685 ORTHO05D000511 1.0e-12 77.0 98 54.1
Sopen06g030320 Solanum pennellii HOM05D000685 ORTHO05D000511 1.0e-12 77.0 98 54.1
PGSC0003DMG400005936 Solanum tuberosum HOM05D000685 ORTHO05D000511 1.4e-12 76.6 98 53.1
Dinv33563 Davidia involucrata HOM05D000685 ORTHO05D000511 3.0e-12 75.5 98 57.1
CSS0035563 Camellia sinensis var. sinensis HOM05D000685 ORTHO05D000511 5.1e-12 74.7 97 56.7
Nitab4.5_0000875g0100 Nicotiana tabacum HOM05D000685 ORTHO05D000511 1.5e-11 73.2 98 52.0
Dinv33564 Davidia involucrata HOM05D000685 ORTHO05D000511 2.0e-11 72.8 98 53.1
Duzib150G0045 Durio zibethinus HOM05D000685 ORTHO05D000511 2.0e-11 72.8 98 49.0
Manes.04G064600 Manihot esculenta HOM05D000685 ORTHO05D000511 2.5e-11 72.4 98 50.0
Gohir.D09G100400 Gossypium hirsutum HOM05D000685 ORTHO05D000511 3.3e-11 72.0 98 51.0
CAN.G1463.16 Capsicum annuum HOM05D000685 ORTHO05D000511 4.3e-11 71.6 98 52.0
Peaxi162Scf00098g00134 Petunia axillaris HOM05D000685 ORTHO05D000511 4.3e-11 71.6 98 53.1
arahy.Tifrunner.gnm1.ann1.W7IKXG Arachis hypogaea HOM05D000685 ORTHO05D000511 5.7e-11 71.2 99 53.5
Gohir.A09G101000 Gossypium hirsutum HOM05D000685 ORTHO05D000511 1.3e-10 70.1 98 50.0
Gorai.006G117800 Gossypium raimondii HOM05D000685 ORTHO05D000511 1.7e-10 69.7 98 50.0
Psat5g262680 Pisum sativum HOM05D000685 ORTHO05D000511 1.7e-10 69.7 72 63.9
Solyc11g071810.2 Solanum lycopersicum HOM05D000685 ORTHO05D000511 1.7e-10 69.7 46 76.1
arahy.Tifrunner.gnm1.ann1.20NM7L Arachis hypogaea HOM05D000685 ORTHO05D000511 2.2e-10 69.3 99 52.5
Phvul.005G117600 Phaseolus vulgaris HOM05D000685 ORTHO05D000511 2.2e-10 69.3 103 49.5
Gohir.A07G114400 Gossypium hirsutum HOM05D000685 ORTHO05D000511 2.8e-10 68.9 77 63.6
Gohir.D07G118000 Gossypium hirsutum HOM05D000685 ORTHO05D000511 2.8e-10 68.9 77 63.6
Gorai.001G127000 Gossypium raimondii HOM05D000685 ORTHO05D000511 2.8e-10 68.9 77 63.6
VMungo1080G1013 Vigna mungo HOM05D000685 ORTHO05D000511 2.8e-10 68.9 103 49.5
Ciclev10029354m.g Citrus clementina HOM05D000685 ORTHO05D000511 3.7e-10 68.6 98 51.0
MELO3C014527.2 Cucumis melo HOM05D000685 ORTHO05D000511 3.7e-10 68.6 100 46.0
Nn2g14381 Nelumbo nucifera HOM05D000685 ORTHO05D000511 3.7e-10 68.6 98 48.0
Actinidia11675 Actinidia chinensis HOM05D000685 ORTHO05D000511 6.3e-10 67.8 98 52.0
CsaV3_6G038650 Cucumis sativus L. HOM05D000685 ORTHO05D000511 6.3e-10 67.8 98 46.9
Lalb_Chr24g0393311 Lupinus albus HOM05D000685 ORTHO05D000511 8.2e-10 67.4 79 62.0
Potri.001G214700 Populus trichocarpa HOM05D000685 ORTHO05D000511 8.2e-10 67.4 98 49.0
Oeu048822.1 Olea europaea HOM05D000685 ORTHO05D000511 1.1e-09 67.0 98 50.0
TPR.G4209 Trifolium pratense HOM05D000685 ORTHO05D000511 1.1e-09 67.0 73 58.9
Glyma.12G190500 Glycine max HOM05D000685 ORTHO05D000511 1.4e-09 66.6 60 63.3
Glyma.13G311200 Glycine max HOM05D000685 ORTHO05D000511 1.4e-09 66.6 99 51.5
Duzib168G1929 Durio zibethinus HOM05D000685 ORTHO05D000511 2.4e-09 65.9 113 46.9
Migut.D02379 Erythranthe guttata HOM05D000685 ORTHO05D000511 2.4e-09 65.9 98 51.0
Manes.11G103500 Manihot esculenta HOM05D000685 ORTHO05D000511 2.4e-09 65.9 98 46.9
Nn6g34616 Nelumbo nucifera HOM05D000685 ORTHO05D000511 2.4e-09 65.9 98 46.9
Nitab4.5_0003032g0030 Nicotiana tabacum HOM05D000685 ORTHO05D000511 2.4e-09 65.9 98 49.0
Nitab4.5_0008788g0010 Nicotiana tabacum HOM05D000685 ORTHO05D000511 2.4e-09 65.9 70 54.3
PGR119G1118 Punica granatum HOM05D000685 ORTHO05D000511 2.4e-09 65.9 72 63.9
PGSC0003DMG400002988 Solanum tuberosum HOM05D000685 ORTHO05D000511 2.4e-09 65.9 41 73.2
Glyma.06G308900 Glycine max HOM05D000685 ORTHO05D000511 3.1e-09 65.5 98 51.0
Lalb_Chr14g0375921 Lupinus albus HOM05D000685 ORTHO05D000511 3.1e-09 65.5 92 52.2
Phvul.011G100300 Phaseolus vulgaris HOM05D000685 ORTHO05D000511 4.1e-09 65.1 98 52.0
Lj3g0013187 Lotus japonicus HOM05D000685 ORTHO05D000511 5.3e-09 64.7 58 65.5
Sed0009422 Sechium edule HOM05D000685 ORTHO05D000511 5.3e-09 64.7 72 59.7
TAR623G0158 Trochodendron aralioides HOM05D000685 ORTHO05D000511 5.3e-09 64.7 99 51.5
MSTRG.21006 Avicennia marina HOM05D000685 ORTHO05D000511 6.9e-09 64.3 98 51.0
VMungo1127G2006 Vigna mungo HOM05D000685 ORTHO05D000511 6.9e-09 64.3 98 52.0
GSVIVG01022586001 Vitis vinifera HOM05D000685 ORTHO05D000511 9.1e-09 63.9 68 54.4
Ca_01623_v3 Cicer arietinum L. HOM05D000685 ORTHO05D000511 1.2e-08 63.5 98 50.0
Lalb_Chr03g0028531 Lupinus albus HOM05D000685 ORTHO05D000511 1.2e-08 63.5 99 49.5
Lalb_Chr19g0136141 Lupinus albus HOM05D000685 ORTHO05D000511 1.2e-08 63.5 113 45.1
QL01p019166 Quercus lobata HOM05D000685 ORTHO05D000511 1.2e-08 63.5 98 46.9
Glyma.12G096000 Glycine max HOM05D000685 ORTHO05D000511 1.5e-08 63.2 98 50.0
Lj1A254G19 Lonicera japonica HOM05D000685 ORTHO05D000511 1.5e-08 63.2 38 97.4
Peaxi162Scf00717g00318 Petunia axillaris HOM05D000685 ORTHO05D000511 1.5e-08 63.2 98 45.9
Sabra16G0128500 Salix brachista HOM05D000685 ORTHO05D000511 1.5e-08 63.2 99 49.5
Oeu058191.1 Olea europaea HOM05D000685 ORTHO05D000511 2.0e-08 62.8 98 46.9
Prupe.6G147600 Prunus persica HOM05D000685 ORTHO05D000511 2.0e-08 62.8 98 46.9
Sabra09G0000800 Salix brachista HOM05D000685 ORTHO05D000511 4.5e-08 61.6 98 46.9
CiPaw.14G092400 Carya illinoinensis HOM05D000685 ORTHO05D000511 5.9e-08 61.2 98 44.9
Eucgr.J00587 Eucalyptus grandis HOM05D000685 ORTHO05D000511 5.9e-08 61.2 101 48.5
Hma1.2p1_0101F.1_g049680 Hydrangea macrophylla HOM05D000685 ORTHO05D000511 7.7e-08 60.8 50 68.0
arahy.Tifrunner.gnm1.ann1.K25LU1 Arachis hypogaea HOM05D000685 ORTHO05D000511 1.3e-07 60.1 100 49.0
MSTRG.18798 Avicennia marina HOM05D000685 ORTHO05D000511 1.7e-07 59.7 98 45.9
ClCG02G022510 Citrullus lanatus HOM05D000685 ORTHO05D000511 2.2e-07 59.3 98 42.9
Atru.chr3.3073 Acer truncatum HOM05D000685 ORTHO05D000511 2.9e-07 58.9 100 48.0
Dinv41495 Davidia involucrata HOM05D000685 ORTHO05D000511 2.9e-07 58.9 77 48.1
Lalb_Chr12g0198001 Lupinus albus HOM05D000685 ORTHO05D000511 2.9e-07 58.9 76 46.1
PSO210G2021 Papaver somniferum HOM05D000685 ORTHO05D000511 2.9e-07 58.9 40 72.5
PSO210G3213 Papaver somniferum HOM05D000685 ORTHO05D000511 2.9e-07 58.9 40 72.5
PSO238G0007 Papaver somniferum HOM05D000685 ORTHO05D000511 2.9e-07 58.9 58 56.9
Sopen11g029480 Solanum pennellii HOM05D000685 ORTHO05D000511 2.9e-07 58.9 63 52.4
Haze_23596 Corylus avellana HOM05D000685 ORTHO05D000511 5.0e-07 58.2 40 75.0
Medtr2g087740 Medicago truncatula HOM05D000685 ORTHO05D000511 6.5e-07 57.8 99 47.5
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 8.5e-07 57.4 78 50.0
SGA_v2.0_scaffold7G04008 Striga asiatica HOM05D000685 ORTHO05D000511 8.5e-07 57.4 98 45.9
RcHm_v2.0_Chr2g0088171 Rosa chinensis HOM05D000685 ORTHO05D000511 1.1e-06 57.0 58 55.2
CsaV3_1G030340 Cucumis sativus L. HOM05D000685 ORTHO05D000511 1.4e-06 56.6 79 46.8
Lalb_Chr07g0179071 Lupinus albus HOM05D000685 ORTHO05D000511 1.4e-06 56.6 76 46.1
MSTRG.17672 Avicennia marina HOM05D000685 ORTHO05D000511 2.5e-06 55.8 70 55.7
A08p35130 Brassica napus HOM05D000685 ORTHO05D000511 2.5e-06 55.8 98 45.9
CiPaw.13G126700 Carya illinoinensis HOM05D000685 ORTHO05D000511 2.5e-06 55.8 50 60.0
Psat4g037440 Pisum sativum HOM05D000685 ORTHO05D000511 2.5e-06 55.8 76 44.7
ATR0697G223 Amborella trichopoda HOM05D000685 ORTHO05D000511 3.2e-06 55.5 71 52.1
CDE07G0294 Ceratophyllum demersum HOM05D000685 ORTHO05D000511 3.2e-06 55.5 36 77.8
Gohir.A05G015400 Gossypium hirsutum HOM05D000685 ORTHO05D000511 4.2e-06 55.1 75 49.3
Gohir.A07G036400 Gossypium hirsutum HOM05D000685 ORTHO05D000511 4.2e-06 55.1 76 48.7
MSTRG.12399 Avicennia marina HOM05D000685 ORTHO05D000511 5.5e-06 54.7 99 43.4
Zm00001eb134520 Zea mays HOM05D000685 ORTHO05D000511 5.5e-06 54.7 57 56.1
arahy.Tifrunner.gnm1.ann1.R7E7C4 Arachis hypogaea HOM05D000685 ORTHO05D000511 7.2e-06 54.3 79 51.9
ClCG06G011300 Citrullus lanatus HOM05D000685 ORTHO05D000511 7.2e-06 54.3 73 47.9
Duzib150G1224 Durio zibethinus HOM05D000685 ORTHO05D000511 7.2e-06 54.3 76 47.4
Duzib168G1768 Durio zibethinus HOM05D000685 ORTHO05D000511 7.2e-06 54.3 76 47.4
Gorai.009G016700 Gossypium raimondii HOM05D000685 ORTHO05D000511 7.2e-06 54.3 75 48.0
Thecc.09G128600 Theobroma cacao HOM05D000685 ORTHO05D000511 7.2e-06 54.3 58 55.2
Aqoxy7G03677 Aquilegia oxysepala HOM05D000685 ORTHO05D000511 9.4e-06 53.9 77 46.8
Duzib187G1407 Durio zibethinus HOM05D000685 ORTHO05D000511 9.4e-06 53.9 76 47.4
Gohir.D05G016500 Gossypium hirsutum HOM05D000685 ORTHO05D000511 9.4e-06 53.9 75 48.0


User provided reference genes

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