Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A225T5 Lonicera japonica HOM05D008126 ORTHO05D000309 8.9e-87 323.6 161 100.0
Lj3P715T47 Lonicera japonica HOM05D008126 ORTHO05D000309 2.5e-65 252.3 127 96.9
Lj1P415T15 Lonicera japonica HOM05D008126 ORTHO05D000309 9.0e-63 243.8 127 94.5
Lj9P461T43 Lonicera japonica HOM05D008126 ORTHO05D000309 4.9e-61 238.0 127 91.3
Lj2P1210T23 Lonicera japonica HOM05D008126 ORTHO05D000309 3.5e-59 231.9 127 90.6
Lj8P434T2 Lonicera japonica HOM05D008126 ORTHO05D000309 6.6e-58 227.6 127 89.0
Lj7P342T47 Lonicera japonica HOM05D008126 ORTHO05D000309 4.3e-49 198.4 110 90.9
Lj2P828T8 Lonicera japonica HOM05D008126 ORTHO05D000309 7.4e-49 197.6 106 91.5
Lj4P611T23 Lonicera japonica HOM05D008126 ORTHO05D000309 5.3e-47 191.4 114 85.1
Lj2C893T6 Lonicera japonica HOM05D008126 ORTHO05D000309 9.3e-44 180.6 128 68.8
Lj4P758T63 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-43 179.5 128 68.8
Lj3P53T19 Lonicera japonica HOM05D008126 ORTHO05D000309 6.7e-42 174.5 128 67.2
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.9e-41 172.9 124 66.9
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-40 169.9 124 66.1
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 3.1e-39 165.6 124 65.3
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 5.3e-39 164.9 124 63.7
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 9.0e-39 164.1 128 60.9
Lj8P14T13 Lonicera japonica HOM05D008126 ORTHO05D000309 1.5e-38 163.3 124 64.5
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 7.6e-38 161.0 124 62.1
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 7.6e-38 161.0 119 65.5
Lj2P525T32 Lonicera japonica HOM05D008126 ORTHO05D000309 7.6e-38 161.0 124 62.9
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 7.6e-38 161.0 119 64.7
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-37 160.6 128 61.7
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-37 160.6 128 61.7
Lj5P132T39 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-37 160.2 128 59.4
Lj9P287T24 Lonicera japonica HOM05D008126 ORTHO05D000309 3.8e-37 158.7 128 60.2
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 6.5e-37 157.9 128 60.9
Lj9P465T64 Lonicera japonica HOM05D008126 ORTHO05D000309 6.5e-37 157.9 114 69.3
Lj6P361T6 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-36 156.8 89 86.5
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-35 153.7 128 58.6
Lj2P78T23 Lonicera japonica HOM05D008126 ORTHO05D000309 3.5e-35 152.1 128 60.2
Lj5P369T29 Lonicera japonica HOM05D008126 ORTHO05D000309 2.3e-34 149.4 128 58.6
Lj2P661T3 Lonicera japonica HOM05D008126 ORTHO05D000309 6.7e-34 147.9 107 66.4
Lj2P438T31 Lonicera japonica HOM05D008126 ORTHO05D000309 1.9e-33 146.4 118 61.0
Lj3P12T7 Lonicera japonica HOM05D008126 ORTHO05D000309 4.3e-33 145.2 110 60.0
Lj4P899T22 Lonicera japonica HOM05D008126 ORTHO05D000309 2.2e-32 142.9 122 55.7
Lj9P530T13 Lonicera japonica HOM05D008126 ORTHO05D000309 4.8e-32 141.7 128 53.9
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 6.3e-32 141.4 115 60.0
Lj2P720T1 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-31 140.2 125 56.0
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 9.0e-31 137.5 111 60.4
Lj1P1225T25 Lonicera japonica HOM05D008126 ORTHO05D000309 3.4e-30 135.6 117 55.6
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-29 133.7 98 61.2
Lj5P17T12 Lonicera japonica HOM05D008126 ORTHO05D000309 8.5e-29 131.0 110 54.5
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 4.2e-28 128.6 120 51.7
Lj7P267T11 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-27 127.1 125 51.2
Lj6P779T66 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-26 123.6 121 52.9
Lj8P617T6 Lonicera japonica HOM05D008126 ORTHO05D000309 2.3e-26 122.9 85 68.2
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 7.4e-25 117.9 88 60.2
Lj1P817T17 Lonicera japonica HOM05D008126 ORTHO05D000309 6.3e-24 114.8 89 61.8
Lj1P842T49 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-23 113.2 105 52.4
Lj5P258T10 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-23 112.8 89 65.2
Lj2P1035T33 Lonicera japonica HOM05D008126 ORTHO05D000309 4.1e-23 112.1 99 54.5
Lj2P759T3 Lonicera japonica HOM05D008126 ORTHO05D000309 4.1e-23 112.1 86 60.5
Lj4P291T36 Lonicera japonica HOM05D008126 ORTHO05D000309 7.7e-22 107.8 114 50.9
Lj3P1030T42 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-20 104.0 103 48.5
Lj2P359T36 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-15 86.3 88 50.0
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.6e-09 66.2 111 37.8
Lj3P956T21 Lonicera japonica HOM05D008126 ORTHO05D000309 2.6e-09 66.2 47 68.1
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.4e-09 64.7 79 49.4
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.2e-08 63.2 55 58.2
Dinv14680 Davidia involucrata HOM05D008126 ORTHO05D000309 2.8e-08 62.8 55 50.9
Aqoxy7G02008 Aquilegia oxysepala HOM05D008126 ORTHO05D000309 4.8e-08 62.0 120 30.8
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 4.8e-08 62.0 55 50.9
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 8.2e-08 61.2 101 38.6
Lj1P1015T13 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-07 60.5 57 52.6
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 1.4e-07 60.5 42 57.1
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 1.4e-07 60.5 42 57.1
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-07 60.1 101 37.6
Hma1.2p1_0128F.1_g059990 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.8e-07 60.1 56 57.1
Lj3P1070T11 Lonicera japonica HOM05D009687 ORTHO05D234317 1.8e-07 60.1 36 80.6
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 2.4e-07 59.7 65 41.5
BcaC04g20956 Brassica carinata HOM05D008073 ORTHO05D000309 3.1e-07 59.3 102 36.3
BolC9t56587H Brassica oleracea HOM05D008073 ORTHO05D000309 3.1e-07 59.3 102 36.3
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 3.1e-07 59.3 47 46.8
Hma1.2p1_1051F.1_g252070 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 3.1e-07 59.3 55 52.7
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-07 59.3 43 58.1
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-07 59.3 43 58.1
Peaxi162Scf00795g00012 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-07 59.3 43 58.1
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-07 59.3 43 58.1
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-07 59.3 43 58.1
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 5.3e-07 58.5 110 35.5
Carub.0001s3344 Capsella rubella HOM05D010286 ORTHO05D000309 5.3e-07 58.5 73 43.8
DCAR_015412 Daucus carota HOM05D001383 ORTHO05D000309 5.3e-07 58.5 81 40.7
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 5.3e-07 58.5 41 58.5
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 5.3e-07 58.5 42 54.8
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 7.0e-07 58.2 115 36.5
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 7.0e-07 58.2 115 36.5
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 7.0e-07 58.2 116 28.4
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 7.0e-07 58.2 115 36.5
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 7.0e-07 58.2 82 36.6
BolC9t53939H Brassica oleracea HOM05D007774 ORTHO05D000309 7.0e-07 58.2 73 37.0
Hma1.2p1_1382F.1_g279350 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 7.0e-07 58.2 59 49.2
Ah.04g159280 Amaranthus hybridus HOM05D008388 ORTHO05D000309 9.1e-07 57.8 62 50.0
BolC2t09463H Brassica oleracea HOM05D007774 ORTHO05D000309 9.1e-07 57.8 73 37.0
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 1.2e-06 57.4 101 36.6
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 1.2e-06 57.4 116 27.6
Lju9295C0G2 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-06 57.4 71 42.3
Nitab4.5_0000337g0240 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.2e-06 57.4 41 53.7
Ah.01g011000 Amaranthus hybridus HOM05D008388 ORTHO05D000309 1.6e-06 57.0 46 54.3
CAN.G1343.17 Capsicum annuum HOM05D009408 ORTHO05D000309 1.6e-06 57.0 47 46.8
Nitab4.5_0000141g0260 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.6e-06 57.0 41 53.7
Peaxi162Scf00562g00026 Petunia axillaris HOM05D004040 ORTHO05D000309 1.6e-06 57.0 42 54.8
Lsat_1_v5_gn_1_95961 Lactuca sativa HOM05D009585 ORTHO05D000309 2.0e-06 56.6 72 41.7
Nitab4.5_0000529g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 2.0e-06 56.6 41 53.7
Peaxi162Scf01414g00015 Petunia axillaris HOM05D001383 ORTHO05D000309 2.0e-06 56.6 45 53.3
SGA_v2.0_scaffold199G41207 Striga asiatica HOM05D011630 ORTHO05D014269 2.0e-06 56.6 66 36.4
Actinidia16536 Actinidia chinensis HOM05D001383 ORTHO05D000309 2.6e-06 56.2 76 38.2
Lsat_1_v5_gn_4_160641 Lactuca sativa HOM05D009585 ORTHO05D000309 2.6e-06 56.2 72 41.7
Peaxi162Scf00075g00085 Petunia axillaris HOM05D001383 ORTHO05D000309 2.6e-06 56.2 41 56.1
Peaxi162Scf00145g00107 Petunia axillaris HOM05D001383 ORTHO05D000309 2.6e-06 56.2 41 61.0
Peaxi162Scf00465g00011 Petunia axillaris HOM05D001383 ORTHO05D000309 2.6e-06 56.2 41 56.1
Peaxi162Scf01316g00007 Petunia axillaris HOM05D001383 ORTHO05D000309 2.6e-06 56.2 41 56.1
SGA_v2.0_scaffold310G48213 Striga asiatica HOM05D001383 ORTHO05D000309 2.6e-06 56.2 83 34.9
VMungo0540G1045 Vigna mungo HOM05D010006 ORTHO05D009911 2.6e-06 56.2 63 36.5
CiPaw.03G153700 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.5e-06 55.8 46 47.8
Hma1.2p1_0787F.1_g217983 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.5e-06 55.8 77 35.1
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.5e-06 55.8 86 39.5
Lj1P1164T26 Lonicera japonica HOM05D064839 ORTHO05D000309 3.5e-06 55.8 33 87.9
Peaxi162Scf00351g00017 Petunia axillaris HOM05D001383 ORTHO05D000309 3.5e-06 55.8 41 53.7
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 3.5e-06 55.8 43 55.8
VMungo1383G2600 Vigna mungo HOM05D010006 ORTHO05D009911 3.5e-06 55.8 69 43.5
CiPaw.14G106100 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.5e-06 55.5 44 50.0
Nitab4.5_0000128g0210 Nicotiana tabacum HOM05D009794 ORTHO05D000309 4.5e-06 55.5 41 53.7
Peaxi162Scf00658g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 4.5e-06 55.5 43 51.2
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 4.5e-06 55.5 43 55.8
Peaxi162Scf01216g00039 Petunia axillaris HOM05D004040 ORTHO05D000309 4.5e-06 55.5 42 57.1
CAN.G1801.2 Capsicum annuum HOM05D009408 ORTHO05D000309 5.9e-06 55.1 47 44.7
CAN.G781.1 Capsicum annuum HOM05D009408 ORTHO05D000309 5.9e-06 55.1 47 44.7
CiPaw.11G105700 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.9e-06 55.1 72 34.7
Dinv24546 Davidia involucrata HOM05D001383 ORTHO05D000309 5.9e-06 55.1 41 56.1
Medtr1g055150 Medicago truncatula HOM05D009039 ORTHO05D011159 5.9e-06 55.1 62 43.5
Nitab4.5_0000299g0230 Nicotiana tabacum HOM05D009794 ORTHO05D000309 5.9e-06 55.1 41 51.2
Nitab4.5_0000381g0280 Nicotiana tabacum HOM05D009794 ORTHO05D000309 5.9e-06 55.1 41 51.2
Nitab4.5_0002918g0110 Nicotiana tabacum HOM05D009794 ORTHO05D000309 5.9e-06 55.1 41 51.2
Atru.chr6.2712 Acer truncatum HOM05D007742 ORTHO05D004072 7.7e-06 54.7 42 59.5
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 7.7e-06 54.7 57 47.4
CiPaw.07G027100 Carya illinoinensis HOM05D009850 ORTHO05D011981 7.7e-06 54.7 43 51.2
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.7e-06 54.7 117 36.8
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.7e-06 54.7 83 38.6
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 7.7e-06 54.7 93 35.5
Nitab4.5_0001759g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 7.7e-06 54.7 41 51.2
Peaxi162Scf00043g00065 Petunia axillaris HOM05D004040 ORTHO05D000309 7.7e-06 54.7 46 50.0
Peaxi162Scf00100g00811 Petunia axillaris HOM05D004040 ORTHO05D000309 7.7e-06 54.7 42 50.0
Peaxi162Scf00274g00613 Petunia axillaris HOM05D004040 ORTHO05D000309 7.7e-06 54.7 46 50.0
Peaxi162Scf00677g00029 Petunia axillaris HOM05D004040 ORTHO05D000309 7.7e-06 54.7 46 50.0
Peaxi162Scf01138g00111 Petunia axillaris HOM05D004040 ORTHO05D000309 7.7e-06 54.7 42 52.4
Rhsim11G0046300 Rhododendron simsii HOM05D001383 ORTHO05D000309 7.7e-06 54.7 58 50.0
SGA_v2.0_scaffold156G37257 Striga asiatica HOM05D035478 ORTHO05D000309 7.7e-06 54.7 109 31.2
SGA_v2.0_scaffold45G16985 Striga asiatica HOM05D001383 ORTHO05D000309 7.7e-06 54.7 83 34.9
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 7.7e-06 54.7 53 43.4


User provided reference genes

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