Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 4.7e-75 284.6 167 100.0
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 3.9e-37 158.7 167 59.3
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 8.8e-37 157.5 164 57.3
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 6.3e-35 151.4 167 55.7
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 3.1e-34 149.1 166 54.2
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 4.1e-34 148.7 117 74.4
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 6.9e-34 147.9 167 54.5
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 6.5e-32 141.4 151 54.3
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 8.5e-32 141.0 168 52.4
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 8.5e-32 141.0 168 55.4
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 8.5e-32 141.0 152 52.6
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 2.5e-31 139.4 125 60.8
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 3.2e-31 139.0 124 64.5
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 5.5e-31 138.3 147 54.4
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 5.5e-31 138.3 165 58.2
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 9.4e-31 137.5 154 51.9
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 2.1e-30 136.3 136 56.6
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 2.1e-30 136.3 168 52.4
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 2.7e-30 136.0 132 61.4
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 2.7e-30 136.0 125 61.6
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 2.7e-30 136.0 132 59.1
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 2.7e-30 136.0 167 56.3
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 4.7e-30 135.2 125 60.8
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 4.7e-30 135.2 153 53.6
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 1.0e-29 134.0 116 63.8
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 1.4e-29 133.7 157 50.3
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 1.8e-29 133.3 155 52.3
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 1.8e-29 133.3 118 61.9
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 2.6e-28 129.4 167 47.3
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 2.6e-28 129.4 127 55.9
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 3.3e-28 129.0 141 56.0
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 4.4e-28 128.6 125 56.0
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 5.7e-28 128.3 127 55.1
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 7.4e-28 127.9 139 56.8
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 9.7e-28 127.5 158 52.5
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 9.7e-28 127.5 125 57.6
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.3e-27 127.1 134 53.0
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 1.3e-27 127.1 152 51.3
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 2.8e-27 125.9 126 55.6
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 3.7e-27 125.6 166 46.4
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 4.8e-27 125.2 134 56.0
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 1.8e-26 123.2 118 58.5
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 4.1e-26 122.1 117 62.4
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 5.3e-26 121.7 114 57.9
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 6.9e-26 121.3 118 57.6
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 9.1e-26 120.9 120 56.7
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 9.1e-26 120.9 120 56.7
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 2.0e-25 119.8 120 55.8
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 2.6e-25 119.4 169 49.1
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 4.5e-25 118.6 172 47.7
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 4.5e-25 118.6 111 63.1
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 5.9e-25 118.2 172 48.3
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 5.9e-25 118.2 172 48.3
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 5.9e-25 118.2 172 48.3
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 7.7e-25 117.9 172 48.3
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 7.7e-25 117.9 172 48.3
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 1.0e-24 117.5 162 48.8
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 1.3e-24 117.1 155 50.3
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 1.7e-24 116.7 126 54.8
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 1.7e-24 116.7 118 54.2
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 3.8e-24 115.5 123 57.7
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 3.8e-24 115.5 129 56.6
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 5.0e-24 115.2 113 61.1
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 5.0e-24 115.2 116 56.9
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 6.5e-24 114.8 118 55.1
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 8.5e-24 114.4 100 60.0
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 8.5e-24 114.4 118 53.4
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 1.1e-23 114.0 155 48.4
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 1.1e-23 114.0 118 53.4
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 1.9e-23 113.2 120 51.7
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 2.5e-23 112.8 129 50.4
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 2.1e-22 109.8 116 51.7
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 4.7e-22 108.6 116 56.0
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 1.0e-21 107.5 162 47.5
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 1.8e-21 106.7 144 47.9
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 5.2e-21 105.1 115 53.9
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 6.7e-21 104.8 177 40.7
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 7.4e-20 101.3 96 57.3
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 1.4e-18 97.1 100 58.0
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 1.8e-18 96.7 155 41.9
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 3.1e-18 95.9 125 48.8
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 5.0e-16 88.6 100 55.0
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 6.5e-16 88.2 112 49.1
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 6.5e-16 88.2 156 42.3
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 6.5e-16 88.2 126 48.4
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 1.5e-15 87.0 97 54.6
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 2.5e-15 86.3 122 43.4
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 6.1e-14 81.6 101 50.5
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 3.0e-13 79.3 86 53.5
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 6.7e-13 78.2 92 55.4
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 5.7e-12 75.1 51 68.6
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 1.1e-10 70.9 71 46.5
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 1.4e-10 70.5 187 33.7
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 3.1e-10 69.3 109 39.4
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 7.0e-10 68.2 113 38.1
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 9.1e-10 67.8 88 45.5
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 6.5e-08 61.6 155 31.0
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 7.2e-07 58.2 116 35.3
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 8.0e-06 54.7 113 37.2


User provided reference genes

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