Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 7.3e-22 106.3 53 100.0
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 5.8e-11 70.1 43 81.4
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 2.2e-10 68.2 43 74.4
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 1.9e-09 65.1 41 82.9
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 2.4e-09 64.7 42 73.8
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 2.4e-09 64.7 40 82.5
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 3.2e-09 64.3 41 78.0
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 3.2e-09 64.3 41 78.0
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 3.2e-09 64.3 41 78.0
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 3.2e-09 64.3 41 78.0
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 3.2e-09 64.3 41 78.0
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 3.2e-09 64.3 41 78.0
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 3.2e-09 64.3 41 78.0
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 3.2e-09 64.3 41 78.0
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 4.2e-09 63.9 40 77.5
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 5.5e-09 63.5 39 79.5
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 5.5e-09 63.5 39 79.5
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 9.3e-09 62.8 41 73.2
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 9.3e-09 62.8 44 68.2
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 1.2e-08 62.4 41 73.2
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 1.2e-08 62.4 40 77.5
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 1.2e-08 62.4 40 72.5
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 2.1e-08 61.6 42 71.4
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 2.7e-08 61.2 43 69.8
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 2.7e-08 61.2 42 69.0
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 2.7e-08 61.2 41 75.6
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 2.7e-08 61.2 41 78.0
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 2.7e-08 61.2 42 73.8
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 3.5e-08 60.8 41 70.7
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 6.0e-08 60.1 42 71.4
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 7.9e-08 59.7 40 72.5
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 1.0e-07 59.3 43 69.8
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 1.3e-07 58.9 41 70.7
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 1.3e-07 58.9 40 72.5
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 1.3e-07 58.9 48 62.5
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 1.3e-07 58.9 43 69.8
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 1.3e-07 58.9 42 69.0
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 1.3e-07 58.9 42 69.0
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 2.3e-07 58.2 41 70.7
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 3.0e-07 57.8 41 70.7
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 3.0e-07 57.8 41 70.7
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 3.0e-07 57.8 42 66.7
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 3.9e-07 57.4 38 71.1
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 5.1e-07 57.0 38 71.1
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 5.1e-07 57.0 46 67.4
Sc06g0010190 Simmondsia chinensis HOM05D006634 ORTHO05D008282 6.7e-07 56.6 50 60.0
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 8.7e-07 56.2 38 71.1
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 8.7e-07 56.2 40 67.5
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 8.7e-07 56.2 40 72.5
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 1.1e-06 55.8 46 56.5
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 1.1e-06 55.8 38 71.1
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 1.5e-06 55.5 42 66.7
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 1.5e-06 55.5 42 66.7
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 1.5e-06 55.5 59 49.2
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.5e-06 55.5 41 68.3
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 1.5e-06 55.5 41 68.3
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 1.5e-06 55.5 43 65.1
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 1.5e-06 55.5 41 70.7
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.9e-06 55.1 41 65.9
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 1.9e-06 55.1 42 66.7
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 1.9e-06 55.1 49 53.1
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 2.5e-06 54.7 41 68.3
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 2.5e-06 54.7 46 56.5
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 2.5e-06 54.7 41 65.9
HPP92_022576 Vanilla planifolia HOM05D006634 ORTHO05D008282 2.5e-06 54.7 38 73.7
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 3.3e-06 54.3 40 70.0
Nitab4.5_0014490g0010 Nicotiana tabacum HOM05D006634 ORTHO05D008282 3.3e-06 54.3 36 72.2
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 3.3e-06 54.3 37 75.7
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 5.6e-06 53.5 43 62.8
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 5.6e-06 53.5 41 63.4
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 7.4e-06 53.1 43 62.8
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 7.4e-06 53.1 43 62.8
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 9.6e-06 52.8 42 64.3


User provided reference genes

Program Settings