Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 2.2e-252 875.2 444 100.0
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 4.0e-161 572.0 473 68.3
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 6.3e-159 564.7 481 68.0
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 1.7e-151 540.0 471 66.2
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 1.6e-149 533.5 442 70.6
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 3.5e-149 532.3 479 64.3
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 4.5e-149 531.9 479 65.1
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 2.5e-147 526.2 480 62.9
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 3.3e-147 525.8 481 64.0
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 9.5e-147 524.2 479 63.5
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 2.8e-146 522.7 481 63.6
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 3.6e-146 522.3 485 64.3
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 6.1e-146 521.5 480 62.9
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 1.4e-145 520.4 480 63.8
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 8.9e-145 517.7 476 63.0
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 1.2e-144 517.3 472 63.6
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 3.4e-144 515.8 479 64.1
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 9.8e-144 514.2 480 63.3
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 1.3e-143 513.8 482 63.7
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 8.3e-143 511.1 480 61.7
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 1.8e-142 510.0 471 62.6
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 1.8e-142 510.0 480 61.2
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 2.0e-141 506.5 480 61.9
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 2.0e-141 506.5 494 60.7
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 2.7e-141 506.1 480 61.9
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.0e-140 504.2 480 61.5
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.3e-140 503.1 480 61.5
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.9e-140 502.7 480 61.5
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 5.0e-140 501.9 511 59.9
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 4.3e-139 498.8 485 60.2
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 7.3e-139 498.0 480 61.0
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.6e-138 496.9 480 61.0
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 2.1e-138 496.5 482 60.4
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.0e-137 494.2 480 60.6
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 1.3e-135 487.3 480 61.2
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 6.4e-135 485.0 473 61.3
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 8.3e-135 484.6 534 55.6
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 2.4e-134 483.0 494 59.1
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 9.2e-134 481.1 482 60.0
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 9.2e-134 481.1 480 59.6
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 1.2e-133 480.7 519 55.5
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 4.6e-133 478.8 480 61.2
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 6.0e-133 478.4 479 60.3
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 1.7e-132 476.9 483 59.2
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 3.9e-132 475.7 493 58.2
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 1.1e-131 474.2 481 57.8
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.5e-131 473.8 480 60.8
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 1.4e-129 467.2 483 58.6
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 5.2e-129 465.3 484 57.9
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 2.6e-128 463.0 485 58.4
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 7.5e-128 461.5 481 57.8
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 9.8e-128 461.1 486 57.6
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 1.3e-127 460.7 502 56.2
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 2.2e-127 459.9 505 56.6
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 3.7e-127 459.1 480 59.8
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 1.9e-126 456.8 485 57.9
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 9.2e-126 454.5 454 60.4
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 7.8e-125 451.4 544 54.4
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 1.0e-124 451.1 481 57.8
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 2.3e-124 449.9 491 55.2
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 2.5e-123 446.4 504 55.6
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 2.1e-122 443.4 479 54.7
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 1.1e-121 441.0 484 55.0
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 2.3e-121 439.9 490 55.1
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 1.2e-120 437.6 506 54.0
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 3.4e-120 436.0 518 52.3
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 9.9e-120 434.5 490 54.7
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 1.3e-119 434.1 491 55.2
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 6.4e-119 431.8 450 57.1
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 8.3e-119 431.4 551 50.3
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 1.2e-117 427.6 488 53.3
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 1.6e-117 427.2 490 53.5
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 2.7e-117 426.4 551 49.5
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 3.5e-117 426.0 520 52.5
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 1.0e-116 424.5 487 53.6
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 1.9e-115 420.2 481 55.9
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 2.8e-114 416.4 489 52.6
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 1.5e-112 410.6 491 52.7
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 2.6e-112 409.8 496 51.6
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 7.6e-112 408.3 499 51.9
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 1.1e-110 404.4 502 51.6
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 1.1e-110 404.4 477 52.6
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 7.1e-110 401.7 480 51.9
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 9.3e-110 401.4 479 52.2
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 7.8e-109 398.3 499 51.1
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 1.3e-108 397.5 528 48.5
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 9.6e-107 391.3 511 52.6
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 6.2e-106 388.7 395 59.2
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 1.4e-105 387.5 523 49.1
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 4.4e-104 382.5 502 50.4
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 5.8e-104 382.1 488 52.0
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 9.3e-102 374.8 330 66.1
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 1.6e-101 374.0 456 53.1
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 5.1e-100 369.0 485 49.3
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 7.3e-99 365.2 546 45.4
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 1.3e-98 364.4 443 51.5
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 9.0e-97 358.2 363 58.7
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 7.6e-96 355.1 382 58.4
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 2.2e-95 353.6 570 43.7
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 1.4e-94 350.9 497 47.9
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 3.2e-94 349.7 363 58.4
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 3.9e-92 342.8 569 42.7
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 4.5e-88 329.3 319 63.3
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 2.9e-87 326.6 463 46.7
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 7.9e-85 318.5 529 42.0
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 2.3e-84 317.0 533 41.5
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 4.1e-73 279.6 366 48.6
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 1.2e-69 268.1 261 60.5
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 3.4e-64 250.0 226 64.2
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 5.5e-54 216.1 225 54.7
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 1.6e-53 214.5 225 54.2
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 9.7e-51 205.3 187 59.4
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 1.3e-50 204.9 196 58.2
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 1.4e-49 201.4 221 54.3
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 6.8e-44 182.6 423 35.5
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 5.7e-43 179.5 172 55.2
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 2.5e-38 164.1 381 36.2
Actinidia20978 Actinidia chinensis HOM05D005852 ORTHO05D006688 1.5e-35 154.8 138 60.9
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 3.4e-35 153.7 446 32.1
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 1.3e-34 151.8 127 63.0
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 2.8e-34 150.6 189 51.3
SGA_v2.0_scaffold120G32887 Striga asiatica HOM05D005852 ORTHO05D006688 2.8e-34 150.6 158 53.8
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 6.3e-34 149.4 467 29.8
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 1.4e-33 148.3 214 44.9
Nn3g21758 Nelumbo nucifera HOM05D005852 ORTHO05D006688 4.0e-28 130.2 116 58.6
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 9.8e-27 125.6 444 29.5
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 7.5e-19 99.4 457 28.4
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 1.7e-18 98.2 429 27.0
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 1.3e-15 88.6 422 26.8
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 5.2e-12 76.6 436 25.7
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 8.6e-07 59.3 30 83.3
C06p28210 Brassica napus HOM05D005852 ORTHO05D041612 1.9e-06 58.2 68 47.1
BolC6t37987H Brassica oleracea HOM05D005852 ORTHO05D041612 4.3e-06 57.0 68 45.6


User provided reference genes

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