Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1250T61 Lonicera japonica HOM05D000013 ORTHO05D010272 2.4e-59 231.9 108 100.0
ECA246G5052 Erigeron canadensis HOM05D000013 ORTHO05D000011 4.8e-12 74.7 99 39.4
Lj1A1218T60 Lonicera japonica HOM05D000013 ORTHO05D000011 3.1e-11 72.0 46 73.9
Dinv18966 Davidia involucrata HOM05D000013 ORTHO05D000011 7.0e-11 70.9 67 56.7
Dinv18967 Davidia involucrata HOM05D000013 ORTHO05D000011 7.0e-11 70.9 47 74.5
Dinv18936 Davidia involucrata HOM05D000013 ORTHO05D000011 2.6e-10 68.9 47 72.3
CSS0025123 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D010272 8.5e-09 63.9 52 59.6
Actinidia28416 Actinidia chinensis HOM05D000022 ORTHO05D000306 5.5e-08 61.2 52 57.7
vmacro01453 Vaccinium macrocarpon HOM05D000013 ORTHO05D000011 1.2e-07 60.1 54 55.6
CSS0034133 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 2.1e-07 59.3 135 28.1
PGR042G1898 Punica granatum HOM05D000013 ORTHO05D000011 2.1e-07 59.3 51 52.9
Rhsim11G0079800 Rhododendron simsii HOM05D000013 ORTHO05D000011 4.7e-07 58.2 43 62.8
Rhsim11G0080000 Rhododendron simsii HOM05D000013 ORTHO05D000011 4.7e-07 58.2 43 65.1
Eucgr.E03638 Eucalyptus grandis HOM05D000013 ORTHO05D000011 6.1e-07 57.8 47 59.6
CSS0022369 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D010272 8.0e-07 57.4 55 52.7
Eucgr.E03623 Eucalyptus grandis HOM05D000013 ORTHO05D000011 8.0e-07 57.4 47 59.6
Lj1A1218T61 Lonicera japonica HOM05D000013 ORTHO05D048412 8.0e-07 57.4 43 65.1
Rhsim02G0113500 Rhododendron simsii HOM05D000022 ORTHO05D000071 8.0e-07 57.4 56 48.2
CSS0010096 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 1.0e-06 57.0 43 65.1
CSS0038664 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 1.0e-06 57.0 43 65.1
Lj1C1250T8 Lonicera japonica HOM05D000013 ORTHO05D048412 1.0e-06 57.0 46 56.5
Rhsim11G0022600 Rhododendron simsii HOM05D000013 ORTHO05D000011 1.4e-06 56.6 43 62.8
Cc00_g26330 Coffea canephora HOM05D000013 ORTHO05D153118 1.8e-06 56.2 79 38.0
PGR042G2608 Punica granatum HOM05D000013 ORTHO05D000011 2.3e-06 55.8 51 51.0
FvH4_3g21400 Fragaria vesca HOM05D000013 ORTHO05D000011 3.0e-06 55.5 47 55.3
FAN11G3715 Fragaria x ananassa HOM05D000013 ORTHO05D000011 3.0e-06 55.5 47 55.3
FAN16G1022 Fragaria x ananassa HOM05D000013 ORTHO05D000011 3.0e-06 55.5 47 55.3
Prupe.4G142600 Prunus persica HOM05D000013 ORTHO05D000011 3.0e-06 55.5 49 51.0
Rhsim11G0082700 Rhododendron simsii HOM05D000013 ORTHO05D000011 3.0e-06 55.5 43 60.5
arahy.Tifrunner.gnm1.ann1.NYGD4Z Arachis hypogaea HOM05D000013 ORTHO05D000011 5.2e-06 54.7 53 45.3
arahy.Tifrunner.gnm1.ann1.SQF377 Arachis hypogaea HOM05D000013 ORTHO05D000011 5.2e-06 54.7 53 45.3
Eucgr.E03629 Eucalyptus grandis HOM05D000013 ORTHO05D000011 5.2e-06 54.7 48 56.2
Lj3g0017352 Lotus japonicus HOM05D000013 ORTHO05D000011 5.2e-06 54.7 44 56.8
Lj3g0026891 Lotus japonicus HOM05D000013 ORTHO05D000011 5.2e-06 54.7 45 53.3
RcHm_v2.0_Chr5g0026891 Rosa chinensis HOM05D000013 ORTHO05D000011 5.2e-06 54.7 43 58.1
Solyc02g030300.3 Solanum lycopersicum HOM05D000013 ORTHO05D000011 5.2e-06 54.7 49 57.1
FAN11G1850 Fragaria x ananassa HOM05D000013 ORTHO05D000011 6.7e-06 54.3 46 56.5
FAN16G3213 Fragaria x ananassa HOM05D000013 ORTHO05D000011 6.7e-06 54.3 46 56.5
FAN21G0606 Fragaria x ananassa HOM05D000013 ORTHO05D000011 6.7e-06 54.3 47 55.3
FAN25G3361 Fragaria x ananassa HOM05D000013 ORTHO05D000011 6.7e-06 54.3 47 53.2
Lalb_Chr20g0110051 Lupinus albus HOM05D000013 ORTHO05D000011 6.7e-06 54.3 38 65.8
Ciclev10007451m.g Citrus clementina HOM05D000013 ORTHO05D000011 8.8e-06 53.9 60 45.0
Lj8A323G48 Lonicera japonica HOM05D000013 ORTHO05D030007 8.8e-06 53.9 94 37.2
Rhsim11G0080500 Rhododendron simsii HOM05D000013 ORTHO05D000011 8.8e-06 53.9 43 58.1
RcHm_v2.0_Chr5g0026911 Rosa chinensis HOM05D000013 ORTHO05D000011 8.8e-06 53.9 43 58.1
Hund26495 Selenicereus undatus HOM05D000013 ORTHO05D000506 8.8e-06 53.9 89 38.2
Hund26498 Selenicereus undatus HOM05D000741 ORTHO05D000506 8.8e-06 53.9 89 38.2
TAR626G0682 Trochodendron aralioides HOM05D000013 ORTHO05D000011 8.8e-06 53.9 47 57.4


User provided reference genes

Program Settings