Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 0.0e+00 1156.7 574 100.0
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 7.4e-176 621.3 630 57.5
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 2.1e-175 619.8 658 55.9
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 9.3e-155 551.2 650 51.4
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 4.8e-151 538.9 648 51.5
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.8e-150 537.0 645 50.9
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 2.9e-148 529.6 636 52.5
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 1.9e-147 526.9 647 50.9
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 2.5e-147 526.6 657 48.9
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 1.2e-146 524.2 648 50.0
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 6.1e-146 521.9 626 51.0
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.1e-144 517.7 639 51.2
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 6.3e-143 511.9 650 49.5
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 5.9e-141 505.4 644 50.0
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 1.1e-139 501.1 627 48.6
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 1.4e-139 500.7 621 48.3
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 3.0e-137 493.0 607 52.7
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 6.7e-137 491.9 637 49.5
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 5.7e-136 488.8 634 49.1
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 2.2e-135 486.9 637 49.0
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 6.3e-135 485.3 622 47.6
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 7.7e-133 478.4 637 47.6
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 1.3e-132 477.6 682 45.7
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 6.1e-130 468.8 628 47.9
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 6.1e-130 468.8 628 47.9
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 1.0e-129 468.0 630 46.8
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 8.8e-129 464.9 632 46.7
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 2.0e-128 463.8 636 45.4
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 2.0e-128 463.8 639 46.9
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 4.4e-128 462.6 633 46.4
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 2.8e-127 459.9 617 49.3
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 4.1e-126 456.1 643 46.8
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 4.1e-126 456.1 616 48.7
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.2e-125 454.5 624 47.4
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 1.2e-125 454.5 632 45.4
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 1.6e-125 454.1 662 44.6
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 1.3e-124 451.1 640 45.5
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 6.5e-124 448.7 626 47.4
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 2.5e-123 446.8 649 45.5
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 2.5e-123 446.8 600 50.0
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 3.2e-123 446.4 638 46.1
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 3.2e-123 446.4 624 47.1
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 7.2e-123 445.3 629 47.5
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 9.4e-123 444.9 638 45.9
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 1.2e-122 444.5 644 45.3
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 6.1e-122 442.2 521 52.8
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 6.1e-122 442.2 689 44.3
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.0e-121 441.4 625 45.9
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 1.4e-121 441.0 647 45.6
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 2.3e-121 440.3 595 48.6
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 1.5e-120 437.6 618 47.4
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 2.6e-120 436.8 652 44.8
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 3.4e-120 436.4 635 45.7
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.8e-119 433.3 637 44.9
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 3.1e-118 429.9 644 44.6
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 4.1e-118 429.5 659 44.9
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 1.3e-116 424.5 649 42.7
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 2.3e-116 423.7 666 44.0
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 1.9e-115 420.6 639 44.3
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 7.2e-115 418.7 607 47.8
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 1.2e-114 417.9 625 46.2
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 2.8e-114 416.8 627 44.2
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 1.4e-113 414.5 637 44.3
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 9.8e-112 408.3 643 44.0
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.4e-110 404.4 539 46.9
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 1.2e-109 401.4 639 43.8
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 1.6e-109 401.0 619 44.3
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 2.0e-109 400.6 630 44.8
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 1.3e-108 397.9 624 44.2
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 1.3e-108 397.9 630 44.6
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.5e-107 393.7 484 49.6
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 9.5e-107 391.7 632 41.9
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 1.4e-105 387.9 653 42.6
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 2.3e-105 387.1 637 44.3
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 4.0e-105 386.3 620 43.5
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 5.7e-104 382.5 616 45.1
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 7.5e-104 382.1 616 44.8
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 1.7e-103 380.9 620 43.7
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 6.4e-103 379.0 642 42.5
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.8e-97 360.9 638 41.1
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 4.9e-95 352.8 658 39.4
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.4e-94 350.5 454 48.7
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 7.0e-94 349.0 635 40.6
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 1.2e-93 348.2 581 41.0
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 9.5e-91 338.6 622 40.8
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 1.6e-90 337.8 434 47.9
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 4.7e-90 336.3 491 44.6
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 5.2e-89 332.8 594 41.4
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 2.0e-88 330.9 611 40.6
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.2e-87 327.4 639 38.5
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 6.4e-87 325.9 622 39.1
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 6.0e-85 319.3 619 39.4
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.3e-84 318.2 525 41.9
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.3e-84 318.2 619 39.7
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 5.6e-83 312.8 622 39.5
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 8.1e-82 308.9 645 38.3
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 5.8e-80 302.8 618 39.8
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 5.8e-80 302.8 622 39.2
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 2.2e-79 300.8 472 42.4
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 6.4e-79 299.3 600 39.7
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 3.2e-78 297.0 444 45.9
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 1.0e-76 292.0 693 35.9
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 1.5e-75 288.1 610 39.0
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 7.3e-75 285.8 451 43.5
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 9.6e-75 285.4 613 38.7
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 9.6e-75 285.4 624 37.5
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 2.1e-74 284.3 580 38.4
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 8.1e-74 282.3 604 39.4
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 1.4e-73 281.6 609 38.9
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 1.5e-72 278.1 603 38.6
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 1.5e-72 278.1 612 38.4
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 5.8e-72 276.2 613 37.7
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 1.7e-71 274.6 421 43.5
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 2.9e-71 273.9 616 38.0
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 4.9e-71 273.1 753 32.8
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 6.4e-71 272.7 616 37.8
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 3.5e-69 266.9 600 37.7
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 2.4e-65 254.2 340 47.1
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 3.0e-60 237.3 444 39.9
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 4.5e-56 223.4 612 34.6
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 2.7e-53 214.2 417 40.8
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 3.3e-51 207.2 586 32.3
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 1.3e-50 205.3 620 32.7
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 4.5e-48 196.8 725 32.0
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 5.1e-44 183.3 165 61.2
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 2.2e-34 151.4 238 44.5
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 5.3e-33 146.7 189 46.6
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 5.3e-33 146.7 128 62.5
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 2.2e-26 124.8 390 33.1
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 5.0e-23 113.6 724 26.2
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 4.8e-18 97.1 179 38.5
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 6.3e-18 96.7 170 37.6
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 8.2e-18 96.3 108 49.1
Actinidia26960 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.3e-15 89.0 80 63.8
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 3.8e-15 87.4 172 37.2
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 1.9e-14 85.1 188 36.2
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 5.7e-11 73.6 108 39.8
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 1.3e-07 62.4 68 52.9


User provided reference genes

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