Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 2.6e-159 565.5 307 100.0
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 2.2e-118 429.5 295 82.0
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 6.4e-118 427.9 308 77.9
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 1.2e-116 423.7 293 78.8
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 1.2e-116 423.7 311 77.8
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 8.6e-115 417.5 309 75.4
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 1.5e-114 416.8 309 76.4
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 3.3e-114 415.6 290 80.3
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 3.3e-114 415.6 311 76.8
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 4.3e-114 415.2 309 76.1
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 5.6e-114 414.8 312 74.7
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.6e-113 413.3 311 75.9
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 1.6e-113 413.3 307 75.9
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 6.2e-113 411.4 306 75.5
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 6.2e-113 411.4 312 75.6
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 6.2e-113 411.4 293 78.2
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 1.8e-112 409.8 293 78.8
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 5.2e-112 408.3 311 74.6
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 5.2e-112 408.3 305 73.4
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 6.8e-112 407.9 309 75.1
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 8.9e-112 407.5 307 75.9
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.2e-111 407.1 309 75.1
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.5e-111 406.8 293 78.2
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 2.6e-111 406.0 297 76.8
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 4.4e-111 405.2 309 74.4
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 5.8e-111 404.8 292 77.1
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 9.9e-111 404.1 310 74.8
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 1.3e-110 403.7 309 74.8
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 1.7e-110 403.3 309 73.8
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 1.7e-110 403.3 289 78.5
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 2.9e-110 402.5 308 73.7
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 3.7e-110 402.1 297 76.1
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 4.9e-110 401.7 307 76.5
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 8.4e-110 401.0 293 76.8
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 3.2e-109 399.1 299 75.6
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 3.2e-109 399.1 295 76.3
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 4.1e-109 398.7 297 76.8
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 5.4e-109 398.3 300 75.7
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 5.4e-109 398.3 315 73.3
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 5.4e-109 398.3 300 75.3
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 7.1e-109 397.9 310 75.2
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 2.7e-108 396.0 284 77.1
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 1.0e-107 394.0 308 74.7
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 3.0e-107 392.5 297 72.7
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 5.1e-107 391.7 290 75.5
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 5.1e-107 391.7 313 71.2
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 5.1e-107 391.7 306 74.5
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 8.6e-107 391.0 290 75.5
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 1.1e-106 390.6 309 72.5
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 1.1e-106 390.6 300 75.0
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 1.9e-106 389.8 307 72.6
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 1.9e-106 389.8 294 73.1
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 1.9e-106 389.8 289 75.1
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 2.5e-106 389.4 295 74.2
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 3.3e-106 389.0 294 73.1
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 3.3e-106 389.0 289 75.1
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 4.3e-106 388.7 301 74.8
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 1.6e-105 386.7 294 72.8
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 3.6e-105 385.6 298 73.5
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 8.1e-105 384.4 296 74.7
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 3.1e-104 382.5 289 75.1
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 6.8e-104 381.3 262 80.2
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 3.4e-103 379.0 287 73.9
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 5.8e-103 378.3 277 74.7
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 5.4e-101 371.7 273 74.4
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 1.7e-99 366.7 243 79.8
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 1.7e-99 366.7 266 75.9
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 6.9e-96 354.8 295 71.2
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 1.5e-95 353.6 264 73.1
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 2.0e-95 353.2 307 66.1
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 4.5e-95 352.1 263 72.2
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 2.9e-94 349.4 259 74.1
AUR62030238 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.6e-92 343.6 300 67.7
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 4.2e-85 318.9 250 66.8
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 1.1e-82 310.8 270 61.1
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 5.6e-82 308.5 311 61.1
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 6.2e-81 305.1 258 65.9
AUR62027602 Chenopodium quinoa HOM05D007650 ORTHO05D009695 9.0e-80 301.2 291 63.6
Sed0021228 Sechium edule HOM05D007650 ORTHO05D009695 7.1e-77 291.6 222 73.0
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 1.8e-67 260.4 174 81.6
Pp3c2_34550 Physcomitrium patens HOM05D007650 ORTHO05D009695 3.0e-67 259.6 197 68.5
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 1.8e-64 250.4 169 81.7
CBR_g31268 Chara braunii HOM05D007650 ORTHO05D009695 3.2e-61 239.6 242 56.2
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 1.4e-56 224.2 234 59.0
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 5.3e-56 222.2 144 87.5
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 1.8e-51 207.2 196 64.3
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 5.2e-51 205.7 149 79.2
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 2.0e-50 203.8 282 51.8
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 1.3e-41 174.5 125 80.8
HanXRQChr09g0241981 Helianthus annuus HOM05D007650 ORTHO05D009695 4.8e-33 146.0 103 75.7
Manes.15G119900 Manihot esculenta HOM05D007650 ORTHO05D009695 1.1e-29 134.8 179 53.6
CAN.G637.51 Capsicum annuum HOM05D007650 ORTHO05D009695 1.5e-26 124.4 120 59.2
CAN.G84.7 Capsicum annuum HOM05D007650 ORTHO05D009695 1.6e-20 104.4 130 52.3
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 6.6e-14 82.4 52 82.7
Zm00001eb089160 Zea mays HOM05D000666 ORTHO05D001431 1.8e-11 74.3 47 80.9


User provided reference genes

Program Settings