Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 0.0e+00 1343.9 700 100.0
Lju124A22T15 Lonicera japonica HOM05D004031 ORTHO05D006678 0.0e+00 1241.1 651 99.8
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 4.8e-270 934.5 872 61.0
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 6.9e-261 904.0 792 63.5
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 9.4e-258 893.6 812 61.8
CSS0004189 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 4.6e-257 891.3 757 64.5
Rhsim03G0003600 Rhododendron simsii HOM05D004031 ORTHO05D006678 2.0e-252 875.9 758 64.5
CiPaw.10G024900 Carya illinoinensis HOM05D004031 ORTHO05D006678 1.7e-251 872.8 766 62.4
Hma1.2p1_0124F.1_g058320 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 8.5e-251 870.5 742 64.2
Dinv24047 Davidia involucrata HOM05D004031 ORTHO05D006678 1.9e-250 869.4 722 67.2
GSVIVG01033461001 Vitis vinifera HOM05D004031 ORTHO05D006678 7.9e-249 864.0 736 64.7
Manes.09G038300 Manihot esculenta HOM05D004031 ORTHO05D006678 1.6e-244 849.7 756 62.4
CiPaw.09G027800 Carya illinoinensis HOM05D004031 ORTHO05D006678 1.9e-242 842.8 752 61.8
RcHm_v2.0_Chr3g0479121 Rosa chinensis HOM05D004031 ORTHO05D006678 7.2e-242 840.9 743 62.4
Prupe.7G082700 Prunus persica HOM05D004031 ORTHO05D006678 3.6e-241 838.6 758 60.9
TAR623G1150 Trochodendron aralioides HOM05D004031 ORTHO05D006678 6.7e-240 834.3 786 60.7
MD12G1054100 Malus domestica HOM05D004031 ORTHO05D006678 7.5e-239 830.9 763 61.9
HanXRQChr13g0398361 Helianthus annuus HOM05D004031 ORTHO05D006678 7.0e-237 824.3 742 61.6
Oeu057586.3 Olea europaea HOM05D004031 ORTHO05D006678 7.0e-237 824.3 748 61.8
FAN05G0520 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.2e-236 823.5 853 55.5
Gorai.002G155200 Gossypium raimondii HOM05D004031 ORTHO05D006678 1.0e-235 820.5 742 59.7
FvH4_6g21770 Fragaria vesca HOM05D004031 ORTHO05D006678 1.3e-235 820.1 744 61.0
Gohir.D01G124700 Gossypium hirsutum HOM05D004031 ORTHO05D006678 1.5e-234 816.6 746 59.5
Thecc.05G175900 Theobroma cacao HOM05D004031 ORTHO05D006678 3.2e-234 815.5 757 59.7
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 1.6e-233 813.1 815 57.9
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 2.1e-233 812.8 803 57.5
ECA233G4423 Erigeron canadensis HOM05D004031 ORTHO05D006678 2.7e-233 812.4 744 61.3
Gohir.A01G137300 Gossypium hirsutum HOM05D004031 ORTHO05D006678 4.7e-233 811.6 746 59.4
MD14G1053000 Malus domestica HOM05D004031 ORTHO05D006678 8.0e-233 810.8 763 60.6
DCAR_009690 Daucus carota HOM05D004031 ORTHO05D006678 1.8e-232 809.7 762 58.8
CANSAT64G2464 Cannabis sativa HOM05D004031 ORTHO05D006678 3.0e-232 808.9 756 59.8
Potri.016G060500 Populus trichocarpa HOM05D004031 ORTHO05D006678 3.4e-231 805.4 755 60.4
Sc13g0002440 Simmondsia chinensis HOM05D004031 ORTHO05D006678 2.2e-230 802.7 745 59.5
TWI74G0357 Tripterygium wilfordii HOM05D004031 ORTHO05D006678 6.3e-230 801.2 747 60.4
Glyma.03G147000 Glycine max HOM05D004031 ORTHO05D006678 9.1e-229 797.3 743 59.4
Cc06_g15550 Coffea canephora HOM05D004031 ORTHO05D006678 5.9e-228 794.7 766 59.0
FAN09G1850 Fragaria x ananassa HOM05D004031 ORTHO05D006678 7.7e-228 794.3 772 58.0
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 7.7e-228 794.3 814 55.8
Lalb_Chr15g0079131 Lupinus albus HOM05D004031 ORTHO05D006678 2.2e-227 792.7 742 59.4
Glyma.19G150400 Glycine max HOM05D004031 ORTHO05D006678 1.9e-226 789.6 768 57.4
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 2.7e-225 785.8 808 56.7
Phvul.001G144700 Phaseolus vulgaris HOM05D004031 ORTHO05D006678 8.0e-225 784.3 736 59.0
PGR142G3960 Punica granatum HOM05D004031 ORTHO05D006678 8.0e-225 784.3 753 58.2
Atru.chr8.1164 Acer truncatum HOM05D004031 ORTHO05D006678 4.0e-224 781.9 757 58.4
Lj1g0024200 Lotus japonicus HOM05D004031 ORTHO05D006678 4.4e-223 778.5 740 57.8
Ca_08544_v3 Cicer arietinum L. HOM05D004031 ORTHO05D006678 1.3e-222 776.9 741 58.4
Eucgr.K01855 Eucalyptus grandis HOM05D004031 ORTHO05D006678 2.2e-222 776.2 751 57.8
Aqoxy1G00041 Aquilegia oxysepala HOM05D004031 ORTHO05D006678 1.8e-221 773.1 741 58.4
MSTRG.19923 Avicennia marina HOM05D004031 ORTHO05D006678 5.4e-221 771.5 749 58.9
Medtr7g093740 Medicago truncatula HOM05D004031 ORTHO05D006678 5.4e-221 771.5 743 57.7
Sabra16G0063400 Salix brachista HOM05D004031 ORTHO05D006678 5.4e-221 771.5 743 59.6
Nn7g35952 Nelumbo nucifera HOM05D004031 ORTHO05D006678 7.0e-221 771.2 792 55.8
Lsat_1_v5_gn_6_36500 Lactuca sativa HOM05D004031 ORTHO05D006678 1.2e-220 770.4 713 59.9
TPR.G13372 Trifolium pratense HOM05D004031 ORTHO05D006678 1.6e-220 770.0 741 58.3
arahy.Tifrunner.gnm1.ann1.YX753W Arachis hypogaea HOM05D004031 ORTHO05D006678 1.7e-219 766.5 743 56.9
Psat3g066880 Pisum sativum HOM05D004031 ORTHO05D006678 1.9e-218 763.1 741 58.0
arahy.Tifrunner.gnm1.ann1.4B2YIP Arachis hypogaea HOM05D004031 ORTHO05D006678 3.3e-218 762.3 769 55.5
CAN.G454.1 Capsicum annuum HOM05D004031 ORTHO05D006678 9.5e-218 760.8 757 56.1
MBI13_g29636_MAGBIO Magnolia biondii HOM05D004031 ORTHO05D006678 2.1e-217 759.6 778 55.3
Potri.006G195000 Populus trichocarpa HOM05D004031 ORTHO05D006678 6.1e-217 758.1 735 58.5
MELO3C009604.2 Cucumis melo HOM05D004031 ORTHO05D006678 4.4e-215 751.9 739 56.6
Migut.J01861 Erythranthe guttata HOM05D004031 ORTHO05D006678 8.3e-214 747.7 731 57.3
AUR62012010 Chenopodium quinoa HOM05D004031 ORTHO05D006678 1.8e-213 746.5 738 55.8
Sed0017241 Sechium edule HOM05D004031 ORTHO05D006678 1.8e-213 746.5 753 55.2
SGA_v2.0_scaffold105G30510 Striga asiatica HOM05D004031 ORTHO05D006678 1.0e-211 740.7 732 56.8
EL10Ac3g06876 Beta vulgaris HOM05D004031 ORTHO05D006678 8.6e-211 737.6 746 55.6
Sopen03g011490 Solanum pennellii HOM05D004031 ORTHO05D006678 1.5e-210 736.9 754 56.0
SalBow6G5892 Salvia bowleyana HOM05D004031 ORTHO05D006678 4.3e-210 735.3 772 55.1
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 1.6e-209 733.4 828 50.2
FAN02G1852 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.0e-208 730.7 816 53.2
Haze_20030 Corylus avellana HOM05D004031 ORTHO05D006678 1.5e-207 726.9 910 49.5
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 5.8e-207 724.9 758 55.0
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 1.2e-199 700.7 820 49.5
PSO339G3947 Papaver somniferum HOM05D004031 ORTHO05D006678 2.6e-199 699.5 767 51.6
VMungo1383G1586 Vigna mungo HOM05D004031 ORTHO05D006678 4.6e-196 688.7 685 57.2
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 1.0e-195 687.6 785 50.1
PSO384G3799 Papaver somniferum HOM05D004031 ORTHO05D006678 1.0e-195 687.6 767 51.4
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 5.6e-194 681.8 774 51.0
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 9.5e-194 681.0 784 50.4
THA.LOC104799283 Tarenaya hassleriana HOM05D004031 ORTHO05D006678 1.7e-190 670.2 734 52.0
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 2.2e-190 669.8 806 49.3
AT3G12010 Arabidopsis thaliana HOM05D004031 ORTHO05D006678 4.4e-183 645.6 729 50.2
CARHR086570 Cardamine hirsuta HOM05D004031 ORTHO05D006678 4.4e-183 645.6 718 50.7
unitig_21.g20577 Utricularia gibba HOM05D004031 ORTHO05D006678 7.6e-183 644.8 623 57.3
Carub.0003s1135 Capsella rubella HOM05D004031 ORTHO05D006678 1.9e-181 640.2 729 49.8
Peaxi162Scf00463g00518 Petunia axillaris HOM05D004031 ORTHO05D006678 7.1e-181 638.3 532 65.4
Aa31LG3G5440 Aethionema arabicum HOM05D004031 ORTHO05D006678 1.2e-180 637.5 729 49.0
Sp3g10240 Schrenkiella parvula HOM05D004031 ORTHO05D006678 3.0e-179 632.9 729 49.8
A03p37440 Brassica napus HOM05D004031 ORTHO05D006678 9.9e-175 617.8 721 50.1
Os10g0400900 Oryza sativa ssp. japonica HOM05D004031 ORTHO05D006678 6.0e-172 608.6 714 47.1
Sed0010020 Sechium edule HOM05D004031 ORTHO05D006678 1.8e-163 580.5 747 47.7
CDE05G0445 Ceratophyllum demersum HOM05D004031 ORTHO05D006678 6.7e-163 578.6 713 48.2
FAN14G1892 Fragaria x ananassa HOM05D004031 ORTHO05D006678 3.3e-162 576.2 637 52.9
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 1.4e-157 560.8 788 43.7
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 1.4e-157 560.8 788 43.7
Solyc03g053010.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 3.2e-157 559.7 644 53.1
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 4.2e-149 532.7 801 41.9
Hma1.2p1_0124F.1_g058310 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 4.3e-146 522.7 435 65.5
BolC5t34246H Brassica oleracea HOM05D004031 ORTHO05D006678 1.5e-143 514.2 744 42.9
Pp3c6_28540 Physcomitrium patens HOM05D004031 ORTHO05D006678 1.7e-142 510.8 736 41.2
Mapoly0005s0167 Marchantia polymorpha HOM05D004031 ORTHO05D006678 6.1e-140 502.3 837 39.9
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 7.9e-140 501.9 638 47.8
AL3G23620 Arabidopsis lyrata HOM05D004031 ORTHO05D006678 2.0e-135 487.3 592 49.0
SMO143G0277 Selaginella moellendorffii HOM05D004031 ORTHO05D006678 1.0e-123 448.4 710 40.1
ClCG10G017700 Citrullus lanatus HOM05D004031 ORTHO05D006678 1.8e-120 437.6 311 68.8
Zm00001eb048600 Zea mays HOM05D004031 ORTHO05D006678 1.0e-118 431.8 579 42.3
QL07p024699 Quercus lobata HOM05D004031 ORTHO05D006678 2.5e-117 427.2 511 52.4
QL07p024684 Quercus lobata HOM05D004031 ORTHO05D006678 2.1e-116 424.1 260 79.6
Aa31LG3G5500 Aethionema arabicum HOM05D004031 ORTHO05D006678 1.2e-114 418.3 442 51.4
Thhalv10020623m.g Eutrema salsugineum HOM05D004031 ORTHO05D006678 1.0e-110 405.2 527 48.2
Nitab4.5_0000009g0250 Nicotiana tabacum HOM05D004031 ORTHO05D006678 1.6e-108 397.9 495 50.1
SEGI_16646 Sequoiadendron giganteum HOM05D004031 ORTHO05D006678 1.6e-76 291.6 573 36.1
Cpa.g.c40176 Carica papaya HOM05D004031 ORTHO05D006678 6.8e-75 286.2 243 66.7
Cpa.g.sc85.42 Carica papaya HOM05D004031 ORTHO05D006678 1.7e-73 281.6 194 68.6
TAR623G0223 Trochodendron aralioides HOM05D004031 ORTHO05D006678 7.1e-72 276.2 173 80.3
Psat7g023080 Pisum sativum HOM05D004031 ORTHO05D006678 4.6e-71 273.5 233 60.1
SHI31751 Sapria himalayana HOM05D004031 ORTHO05D006678 1.3e-70 271.9 366 48.6
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 4.2e-56 223.8 192 60.4
CSS0030127 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 3.0e-54 217.6 143 71.3
CSS0049250 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 4.8e-52 210.3 118 89.0
Solyc03g053000.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 6.7e-46 189.9 142 65.5
Peaxi162Scf00463g00519 Petunia axillaris HOM05D004031 ORTHO05D006678 2.5e-45 188.0 142 64.1
SHI31745 Sapria himalayana HOM05D004031 ORTHO05D006678 2.5e-45 188.0 140 65.0
Psat4g142720 Pisum sativum HOM05D003784 ORTHO05D004345 1.3e-38 165.6 99 78.8
Psat4g142800 Pisum sativum HOM05D003784 ORTHO05D004345 4.2e-32 144.1 86 79.1
CBR_g44463 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-31 141.7 154 47.4
Nn3g18463 Nelumbo nucifera HOM05D004031 ORTHO05D006678 9.1e-27 126.3 74 82.4
BcaB06g25555 Brassica carinata HOM05D004031 ORTHO05D006678 2.9e-25 121.3 101 56.4
Aa31LG3G5510 Aethionema arabicum HOM05D004031 ORTHO05D006678 1.4e-24 119.0 91 61.5
PRCOL_00003629 Prasinoderma coloniale HOM05D004031 ORTHO05D006678 5.7e-21 107.1 614 24.8
CBR_g32659 Chara braunii HOM05D001409 ORTHO05D001511 1.5e-18 99.0 154 37.0
C05p55850 Brassica napus HOM05D004031 ORTHO05D006678 5.9e-18 97.1 122 42.6
BolC5t34254H Brassica oleracea HOM05D004031 ORTHO05D006678 5.9e-18 97.1 90 51.1
Cre08.g370250 Chlamydomonas reinhardtii HOM05D004031 ORTHO05D006678 2.1e-15 88.6 276 26.4
MCO13G277 Micromonas commoda HOM05D004031 ORTHO05D006678 1.1e-13 82.8 223 30.0
Nn2g13219 Nelumbo nucifera HOM05D004031 ORTHO05D006678 5.3e-11 73.9 47 76.6
SHI31749 Sapria himalayana HOM05D003430 ORTHO05D004809 2.0e-10 72.0 58 60.3
GSVIVG01033459001 Vitis vinifera HOM05D004031 ORTHO05D011186 3.5e-10 71.2 38 86.8
MD12G1054200 Malus domestica HOM05D004031 ORTHO05D011186 4.5e-10 70.9 38 86.8
CDE05G3199 Ceratophyllum demersum HOM05D004031 ORTHO05D011186 1.0e-09 69.7 33 97.0
Prupe.7G082600 Prunus persica HOM05D004031 ORTHO05D011186 1.0e-09 69.7 34 94.1
RcHm_v2.0_Chr3g0479131 Rosa chinensis HOM05D004031 ORTHO05D011186 1.0e-09 69.7 38 84.2
Thecc.05G176000 Theobroma cacao HOM05D004031 ORTHO05D011186 1.0e-09 69.7 38 84.2
Potri.016G060550 Populus trichocarpa HOM05D004031 ORTHO05D011186 1.7e-09 68.9 38 81.6
Gohir.D01G124600 Gossypium hirsutum HOM05D004031 ORTHO05D011186 3.8e-09 67.8 38 81.6
Manes.09G038400 Manihot esculenta HOM05D004031 ORTHO05D011186 5.0e-09 67.4 38 78.9
MELO3C009606.2 Cucumis melo HOM05D004031 ORTHO05D011186 6.5e-09 67.0 36 83.3
Gohir.A01G137400 Gossypium hirsutum HOM05D004031 ORTHO05D011186 8.5e-09 66.6 36 83.3
Glyma.19G150500 Glycine max HOM05D004031 ORTHO05D011186 1.5e-08 65.9 38 76.3
Sed0024429 Sechium edule HOM05D004031 ORTHO05D011186 1.5e-08 65.9 38 78.9
Hund07844 Selenicereus undatus HOM05D004031 ORTHO05D006678 1.5e-08 65.9 62 54.8
Eucgr.K01857 Eucalyptus grandis HOM05D004031 ORTHO05D011186 1.9e-08 65.5 32 96.9
Lj1g0020490 Lotus japonicus HOM05D004031 ORTHO05D011186 1.9e-08 65.5 44 72.7
Medtr7g093770 Medicago truncatula HOM05D004031 ORTHO05D011186 3.2e-08 64.7 38 76.3
SEGI_01182 Sequoiadendron giganteum HOM05D004031 ORTHO05D011186 3.2e-08 64.7 37 81.1
Lalb_Chr15g0079141 Lupinus albus HOM05D004031 ORTHO05D011186 4.2e-08 64.3 38 76.3
Nn7g35951 Nelumbo nucifera HOM05D004031 ORTHO05D011186 4.2e-08 64.3 34 85.3
Phvul.001G144800 Phaseolus vulgaris HOM05D004031 ORTHO05D011186 4.2e-08 64.3 38 73.7
Migut.J01860 Erythranthe guttata HOM05D004031 ORTHO05D011186 5.5e-08 63.9 34 79.4
CSS0013106 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D011186 9.4e-08 63.2 36 77.8
Cc06_g15560 Coffea canephora HOM05D004031 ORTHO05D011186 1.2e-07 62.8 34 82.4
SHI31750 Sapria himalayana HOM05D003430 ORTHO05D014065 2.1e-07 62.0 70 48.6
Hund06156 Selenicereus undatus HOM05D000159 ORTHO05D011186 2.1e-07 62.0 34 79.4
CiPaw.09G027900 Carya illinoinensis HOM05D004031 ORTHO05D011186 2.7e-07 61.6 38 73.7
Hma1.2p1_0124F.1_g058300 Hydrangea macrophylla HOM05D004031 ORTHO05D011186 2.7e-07 61.6 33 81.8
Nn7g36859 Nelumbo nucifera HOM05D004031 ORTHO05D011186 3.6e-07 61.2 34 82.4
A03p37430 Brassica napus HOM05D004031 ORTHO05D011186 6.1e-07 60.5 33 78.8
Carub.0003s1134 Capsella rubella HOM05D004031 ORTHO05D011186 6.1e-07 60.5 38 73.7
Aa31LG3G5450 Aethionema arabicum HOM05D004031 ORTHO05D011186 8.0e-07 60.1 38 71.1
Duzib128G0401 Durio zibethinus HOM05D004031 ORTHO05D011186 8.0e-07 60.1 38 73.7
Aa31LG3G5490 Aethionema arabicum HOM05D004031 ORTHO05D011186 2.3e-06 58.5 38 68.4
SHI31744 Sapria himalayana HOM05D004031 ORTHO05D011186 3.0e-06 58.2 38 63.2
CSS0030002 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 4.0e-06 57.8 53 58.5


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