Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1055T68 Lonicera japonica HOM05D000113 ORTHO05D016491 3.8e-44 181.4 112 100.0
Gohir.A04G054700 Gossypium hirsutum HOM05D000113 ORTHO05D001108 2.8e-31 138.7 110 81.8
QL07p036411 Quercus lobata HOM05D000113 ORTHO05D001108 2.8e-31 138.7 110 81.8
CSS0019290 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D001108 2.4e-30 135.6 110 82.7
Cfa020045 Carpinus fangiana HOM05D000113 ORTHO05D001108 3.1e-30 135.2 110 80.9
Gohir.D04G091800 Gossypium hirsutum HOM05D000113 ORTHO05D001108 3.1e-30 135.2 110 79.1
Gorai.009G393800 Gossypium raimondii HOM05D000113 ORTHO05D001108 3.1e-30 135.2 110 82.7
CSS0038642 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D001108 5.3e-30 134.4 110 80.0
Cc06_g06660 Coffea canephora HOM05D000113 ORTHO05D001108 4.5e-29 131.3 110 79.1
Sed0024986 Sechium edule HOM05D000113 ORTHO05D001108 5.9e-29 131.0 110 77.3
PGR142G2809 Punica granatum HOM05D000113 ORTHO05D001108 1.3e-28 129.8 110 77.3
CiPaw.09G021500 Carya illinoinensis HOM05D000113 ORTHO05D001108 1.7e-28 129.4 110 80.0
Ciclev10010961m.g Citrus clementina HOM05D000113 ORTHO05D001108 1.7e-28 129.4 112 76.8
Actinidia37753 Actinidia chinensis HOM05D000113 ORTHO05D001108 2.2e-28 129.0 110 78.2
Hma1.2p1_0064F.1_g034630 Hydrangea macrophylla HOM05D000113 ORTHO05D001108 2.2e-28 129.0 111 79.3
Duzib093G1584 Durio zibethinus HOM05D000113 ORTHO05D001108 2.9e-28 128.6 110 80.9
A03p19850 Brassica napus HOM05D000113 ORTHO05D001108 3.8e-28 128.3 68 83.8
Hma1.2p1_0064F.1_g034640 Hydrangea macrophylla HOM05D000113 ORTHO05D001108 6.5e-28 127.5 110 79.1
Atru.chr8.1339 Acer truncatum HOM05D000113 ORTHO05D001108 1.1e-27 126.7 111 75.7
DCAR_020695 Daucus carota HOM05D000113 ORTHO05D001108 1.1e-27 126.7 110 77.3
Thecc.05G106100 Theobroma cacao HOM05D000113 ORTHO05D001108 1.1e-27 126.7 110 79.1
GSVIVG01022608001 Vitis vinifera HOM05D000113 ORTHO05D001108 1.9e-27 125.9 111 73.9
BcaC01g05688 Brassica carinata HOM05D000113 ORTHO05D001108 2.5e-27 125.6 68 82.4
C03p23180 Brassica napus HOM05D000113 ORTHO05D001108 2.5e-27 125.6 68 82.4
vmacro07482 Vaccinium macrocarpon HOM05D000113 ORTHO05D016491 2.5e-27 125.6 110 75.5
BraA03t11237Z Brassica rapa HOM05D000113 ORTHO05D001108 3.2e-27 125.2 107 77.6
Cpa.g.sc104.19 Carica papaya HOM05D000113 ORTHO05D001108 4.2e-27 124.8 68 80.9
BolC3t14719H Brassica oleracea HOM05D000113 ORTHO05D001108 7.2e-27 124.0 68 80.9
CsaV3_3G038040 Cucumis sativus L. HOM05D000113 ORTHO05D001108 9.4e-27 123.6 110 75.5
Manes.09G046500 Manihot esculenta HOM05D000113 ORTHO05D001108 9.4e-27 123.6 110 75.5
Sabra16G0069800 Salix brachista HOM05D000113 ORTHO05D001108 1.2e-26 123.2 111 66.7
THA.LOC104822546 Tarenaya hassleriana HOM05D000113 ORTHO05D001108 1.2e-26 123.2 110 75.5
Prupe.7G093700 Prunus persica HOM05D000113 ORTHO05D001108 1.6e-26 122.9 110 77.3
BcaB01g03870 Brassica carinata HOM05D000113 ORTHO05D001108 2.1e-26 122.5 108 79.6
COL.COLO4_29548 Corchorus olitorius HOM05D000113 ORTHO05D001108 2.1e-26 122.5 109 78.9
Migut.L01826 Erythranthe guttata HOM05D000113 ORTHO05D001108 2.7e-26 122.1 110 71.8
Thhalv10016179m.g Eutrema salsugineum HOM05D000113 ORTHO05D001108 1.0e-25 120.2 68 77.9
Carub.0004s1767 Capsella rubella HOM05D000113 ORTHO05D001108 1.4e-25 119.8 109 75.2
Peaxi162Scf00582g00818 Petunia axillaris HOM05D000113 ORTHO05D001108 1.4e-25 119.8 110 70.9
Sp4g18170 Schrenkiella parvula HOM05D000113 ORTHO05D001108 1.4e-25 119.8 68 77.9
CARHR130170 Cardamine hirsuta HOM05D000113 ORTHO05D001108 1.8e-25 119.4 110 76.4
Nn6g34672 Nelumbo nucifera HOM05D000113 ORTHO05D001108 1.8e-25 119.4 110 75.5
AL4G32020 Arabidopsis lyrata HOM05D000113 ORTHO05D001108 2.3e-25 119.0 108 76.9
MELO3C009546.2 Cucumis melo HOM05D000113 ORTHO05D001108 5.2e-25 117.9 111 72.1
TAR623G1315 Trochodendron aralioides HOM05D000113 ORTHO05D001108 5.2e-25 117.9 110 74.5
MD12G1041500 Malus domestica HOM05D000113 ORTHO05D001108 6.7e-25 117.5 110 76.4
Dinv31769 Davidia involucrata HOM05D000113 ORTHO05D001108 8.8e-25 117.1 68 76.5
Potri.016G068900 Populus trichocarpa HOM05D000113 ORTHO05D001108 8.8e-25 117.1 110 63.6
SalBow5G0104 Salvia bowleyana HOM05D000113 ORTHO05D001108 8.8e-25 117.1 110 70.9
Sopen01g002960 Solanum pennellii HOM05D000113 ORTHO05D001108 8.8e-25 117.1 110 72.7
ClCG10G018270 Citrullus lanatus HOM05D000113 ORTHO05D001108 1.1e-24 116.7 110 70.9
TWI77G0998 Tripterygium wilfordii HOM05D000113 ORTHO05D001108 1.1e-24 116.7 111 69.4
CANSAT64G0792 Cannabis sativa HOM05D000113 ORTHO05D001108 1.5e-24 116.3 68 75.0
Solyc01g006970.4 Solanum lycopersicum HOM05D000113 ORTHO05D001108 1.5e-24 116.3 110 73.6
TPR.G2806 Trifolium pratense HOM05D000113 ORTHO05D001108 2.0e-24 115.9 111 69.4
RcHm_v2.0_Chr3g0476291 Rosa chinensis HOM05D000113 ORTHO05D001108 7.4e-24 114.0 110 70.9
Sc01g0005480 Simmondsia chinensis HOM05D000113 ORTHO05D001108 7.4e-24 114.0 110 70.0
Nitab4.5_0000077g0130 Nicotiana tabacum HOM05D000113 ORTHO05D016491 9.7e-24 113.6 110 71.8
FAN02G1889 Fragaria x ananassa HOM05D000113 ORTHO05D001108 1.3e-23 113.2 114 72.8
CAN.G911.41 Capsicum annuum HOM05D000113 ORTHO05D001108 1.7e-23 112.8 110 63.6
Lj5g0013929 Lotus japonicus HOM05D000113 ORTHO05D001108 1.7e-23 112.8 110 71.8
FAN09G1330 Fragaria x ananassa HOM05D000113 ORTHO05D001108 6.3e-23 110.9 114 71.9
ECA248G0424 Erigeron canadensis HOM05D000113 ORTHO05D001108 8.2e-23 110.5 110 66.4
Nitab4.5_0003205g0010 Nicotiana tabacum HOM05D000113 ORTHO05D016491 8.2e-23 110.5 110 65.5
ATR0624G083 Amborella trichopoda HOM05D000113 ORTHO05D016491 1.1e-22 110.2 70 72.9
Lsat_1_v5_gn_1_58301 Lactuca sativa HOM05D000113 ORTHO05D001108 2.4e-22 109.0 110 70.0
Aqoxy1G00645 Aquilegia oxysepala HOM05D000113 ORTHO05D001108 3.1e-22 108.6 122 63.9
arahy.Tifrunner.gnm1.ann1.21KVKL Arachis hypogaea HOM05D000113 ORTHO05D001108 5.3e-22 107.8 110 69.1
arahy.Tifrunner.gnm1.ann1.QX2JW8 Arachis hypogaea HOM05D000113 ORTHO05D001108 5.3e-22 107.8 110 69.1
Ca_11680_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001108 7.0e-22 107.5 110 69.1
VMungo0720G0133 Vigna mungo HOM05D000113 ORTHO05D001108 1.2e-21 106.7 110 67.3
FvH4_6g20440 Fragaria vesca HOM05D000113 ORTHO05D001108 2.6e-21 105.5 66 71.2
Psat6g108000 Pisum sativum HOM05D000113 ORTHO05D001108 2.6e-21 105.5 110 69.1
CDE11G0629 Ceratophyllum demersum HOM05D000113 ORTHO05D001108 4.5e-21 104.8 110 64.5
HanXRQChr11g0347141 Helianthus annuus HOM05D000113 ORTHO05D001108 5.9e-21 104.4 110 64.5
Phvul.007G267400 Phaseolus vulgaris HOM05D000113 ORTHO05D001108 7.7e-21 104.0 110 68.2
FAN05G5277 Fragaria x ananassa HOM05D000113 ORTHO05D001108 1.0e-20 103.6 110 70.0
Lalb_Chr06g0172661 Lupinus albus HOM05D000113 ORTHO05D001108 2.9e-20 102.1 110 67.3
Medtr1g056490 Medicago truncatula HOM05D000113 ORTHO05D001108 2.9e-20 102.1 110 68.2
Glyma.10G082300 Glycine max HOM05D000113 ORTHO05D001108 5.0e-20 101.3 110 69.1
Os10g0471350 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D001108 5.0e-20 101.3 68 66.2
Glyma.02G195500 Glycine max HOM05D000113 ORTHO05D001108 6.5e-20 100.9 68 70.6
Ah.02g115720 Amaranthus hybridus HOM05D000113 ORTHO05D001108 1.5e-19 99.8 110 66.4
unitig_578.g16360 Utricularia gibba HOM05D000113 ORTHO05D001108 2.1e-18 95.9 72 59.7
Zm00001eb046110 Zea mays HOM05D000113 ORTHO05D001108 2.7e-18 95.5 68 61.8
PSO339G5681 Papaver somniferum HOM05D000113 ORTHO05D001108 1.5e-16 89.7 69 59.4
Dinv31771 Davidia involucrata HOM05D000113 ORTHO05D016491 4.4e-16 88.2 111 64.9
PSO384G2105 Papaver somniferum HOM05D000113 ORTHO05D001108 5.7e-16 87.8 68 58.8
Haze_03490 Corylus avellana HOM05D000113 ORTHO05D000008 7.5e-16 87.4 88 75.0
Pp3c14_12310 Physcomitrium patens HOM05D000113 ORTHO05D001108 3.1e-14 82.0 71 56.3
Aa31LG5G21060 Aethionema arabicum HOM05D000113 ORTHO05D001108 7.0e-14 80.9 90 73.3
AT2G35920 Arabidopsis thaliana HOM05D000113 ORTHO05D001108 9.1e-14 80.5 48 75.0
Rhsim03G0064000 Rhododendron simsii HOM05D000113 ORTHO05D001108 1.2e-13 80.1 49 73.5
HPP92_005118 Vanilla planifolia HOM05D000113 ORTHO05D001108 1.6e-13 79.7 109 51.4
Eucgr.K01924 Eucalyptus grandis HOM05D000113 ORTHO05D001108 2.7e-13 79.0 48 70.8
Pp3c17_19720 Physcomitrium patens HOM05D000113 ORTHO05D001108 3.8e-12 75.1 65 55.4
Pp3c17_19726 Physcomitrium patens HOM05D000113 ORTHO05D001108 3.8e-12 75.1 65 55.4
SGA_v2.0_scaffold184G40014 Striga asiatica HOM05D000113 ORTHO05D001108 5.0e-12 74.7 87 72.4
Mapoly0016s0048 Marchantia polymorpha HOM05D000113 ORTHO05D001108 8.5e-12 73.9 71 52.1
EL10Ac5g11860 Beta vulgaris HOM05D000113 ORTHO05D001108 1.9e-11 72.8 110 60.0
SEGI_27735 Sequoiadendron giganteum HOM05D000113 ORTHO05D001108 4.1e-06 55.1 49 44.9
CBR_g36488 Chara braunii HOM05D000113 ORTHO05D001108 5.4e-06 54.7 72 37.5


User provided reference genes

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