Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1034G49 Lonicera japonica HOM05D004457 ORTHO05D005282 4.2e-153 544.7 275 100.0
Actinidia08758 Actinidia chinensis HOM05D004457 ORTHO05D005282 2.8e-104 382.5 249 73.5
CSS0048555 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 4.7e-104 381.7 249 76.3
Actinidia34324 Actinidia chinensis HOM05D004457 ORTHO05D005282 1.4e-103 380.2 249 73.9
Prupe.2G328100 Prunus persica HOM05D004457 ORTHO05D005282 1.5e-102 376.7 249 73.5
Hma1.2p1_0419F.1_g149440 Hydrangea macrophylla HOM05D004457 ORTHO05D005282 2.6e-102 375.9 249 73.5
CSS0037309 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 3.4e-102 375.6 249 72.7
CSS0045385 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 3.4e-102 375.6 249 72.3
Cfa016064 Carpinus fangiana HOM05D004457 ORTHO05D005282 4.4e-102 375.2 249 73.9
Thecc.05G219000 Theobroma cacao HOM05D004457 ORTHO05D005282 3.7e-101 372.1 249 74.3
Haze_00385 Corylus avellana HOM05D004457 ORTHO05D005282 6.3e-101 371.3 249 73.5
Potri.013G079201 Populus trichocarpa HOM05D004457 ORTHO05D005282 5.4e-100 368.2 249 74.3
CiPaw.05G214800 Carya illinoinensis HOM05D004457 ORTHO05D005282 4.6e-99 365.2 256 70.3
CiPaw.06G035200 Carya illinoinensis HOM05D004457 ORTHO05D005282 7.8e-99 364.4 249 73.1
Nn6g33553 Nelumbo nucifera HOM05D004457 ORTHO05D005282 7.8e-99 364.4 249 72.3
CSS0031792 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 2.3e-98 362.8 232 75.9
GSVIVG01024347001 Vitis vinifera HOM05D004457 ORTHO05D005282 3.9e-98 362.1 248 69.0
COL.COLO4_15192 Corchorus olitorius HOM05D004457 ORTHO05D005282 1.1e-97 360.5 249 72.7
Lj3A885T46 Lonicera japonica HOM05D004457 ORTHO05D005282 1.1e-97 360.5 252 72.2
Potri.013G079101 Populus trichocarpa HOM05D004457 ORTHO05D005282 1.9e-97 359.8 249 72.7
PGR142G0056 Punica granatum HOM05D004457 ORTHO05D005282 1.9e-97 359.8 250 68.8
Cc02_g00170 Coffea canephora HOM05D004457 ORTHO05D005282 2.5e-97 359.4 258 69.0
MD07G1310300 Malus domestica HOM05D004457 ORTHO05D005282 2.5e-97 359.4 249 69.1
TWI60G0869 Tripterygium wilfordii HOM05D004457 ORTHO05D005282 7.3e-97 357.8 249 68.7
Cpa.g.sc43.116 Carica papaya HOM05D004457 ORTHO05D005282 1.2e-96 357.1 249 69.1
MD01G1237700 Malus domestica HOM05D004457 ORTHO05D005282 1.2e-96 357.1 249 69.1
Manes.09G128300 Manihot esculenta HOM05D004457 ORTHO05D005282 1.2e-96 357.1 249 70.7
Gorai.003G055700 Gossypium raimondii HOM05D004457 ORTHO05D005282 2.8e-96 355.9 250 69.2
TAR375G0461 Trochodendron aralioides HOM05D004457 ORTHO05D005282 2.8e-96 355.9 249 71.1
Gohir.D03G053500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 3.6e-96 355.5 250 69.6
CiPaw.06G035100 Carya illinoinensis HOM05D004457 ORTHO05D005282 6.1e-96 354.8 249 69.9
RcHm_v2.0_Chr1g0384491 Rosa chinensis HOM05D004457 ORTHO05D005282 6.1e-96 354.8 249 69.5
Gohir.A02G127500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 5.2e-95 351.7 250 68.8
Ciclev10021193m.g Citrus clementina HOM05D004457 ORTHO05D005282 3.4e-94 349.0 249 70.3
FvH4_7g34140 Fragaria vesca HOM05D004457 ORTHO05D005282 7.5e-94 347.8 249 68.7
Lsat_1_v5_gn_8_3720 Lactuca sativa HOM05D004457 ORTHO05D005282 9.8e-94 347.4 249 70.3
Peaxi162Scf00516g00661 Petunia axillaris HOM05D004457 ORTHO05D005282 2.9e-93 345.9 250 68.8
Solyc03g097180.3 Solanum lycopersicum HOM05D004457 ORTHO05D005282 2.9e-93 345.9 250 67.6
Nitab4.5_0004530g0100 Nicotiana tabacum HOM05D004457 ORTHO05D005282 3.7e-93 345.5 250 68.0
Aqoxy3G02297 Aquilegia oxysepala HOM05D004457 ORTHO05D005282 1.4e-92 343.6 249 68.7
arahy.Tifrunner.gnm1.ann1.R5JYMV Arachis hypogaea HOM05D004457 ORTHO05D005282 1.4e-92 343.6 252 65.5
Atru.chr12.1918 Acer truncatum HOM05D004457 ORTHO05D005282 1.9e-92 343.2 249 69.1
arahy.Tifrunner.gnm1.ann1.9FAL4E Arachis hypogaea HOM05D004457 ORTHO05D005282 5.4e-92 341.7 252 65.1
FAN10G1543 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.6e-91 340.1 262 65.3
Glyma.01G233500 Glycine max HOM05D004457 ORTHO05D005282 1.6e-91 340.1 250 65.2
Glyma.11G009300 Glycine max HOM05D004457 ORTHO05D005282 2.0e-91 339.7 250 64.4
PGSC0003DMG400003162 Solanum tuberosum HOM05D004457 ORTHO05D005282 2.7e-91 339.3 250 66.8
Rhsim03G0223200 Rhododendron simsii HOM05D004457 ORTHO05D005282 3.5e-91 339.0 305 57.4
Eucgr.K00073 Eucalyptus grandis HOM05D004457 ORTHO05D005282 7.8e-91 337.8 252 65.5
Oeu062823.1 Olea europaea HOM05D004457 ORTHO05D005282 7.8e-91 337.8 250 68.4
Nitab4.5_0000021g0740 Nicotiana tabacum HOM05D004457 ORTHO05D005282 2.3e-90 336.3 241 67.6
HanXRQChr04g0105271 Helianthus annuus HOM05D004457 ORTHO05D005282 3.0e-90 335.9 249 68.7
Gohir.A08G221660 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.5e-89 333.6 249 66.3
Gorai.004G256600 Gossypium raimondii HOM05D004457 ORTHO05D005282 1.5e-89 333.6 249 66.3
Lalb_Chr09g0320121 Lupinus albus HOM05D004457 ORTHO05D005282 7.3e-89 331.3 250 65.2
Hund21100 Selenicereus undatus HOM05D004457 ORTHO05D005282 1.6e-88 330.1 250 64.8
EL10Ac3g05054 Beta vulgaris HOM05D004457 ORTHO05D005282 3.6e-88 328.9 249 64.7
Aa31LG2G2220 Aethionema arabicum HOM05D004457 ORTHO05D005282 4.7e-88 328.6 273 60.1
Gohir.D08G241200 Gossypium hirsutum HOM05D004457 ORTHO05D005282 6.2e-88 328.2 249 65.9
vmacro06531 Vaccinium macrocarpon HOM05D004457 ORTHO05D005282 1.4e-87 327.0 318 55.3
ClCG09G017170 Citrullus lanatus HOM05D004457 ORTHO05D005282 3.1e-87 325.9 250 66.4
CAN.G1131.28 Capsicum annuum HOM05D004457 ORTHO05D005282 4.0e-87 325.5 234 67.5
THA.LOC104805712 Tarenaya hassleriana HOM05D004457 ORTHO05D005282 4.0e-87 325.5 251 66.5
Sed0007489 Sechium edule HOM05D004457 ORTHO05D005282 1.2e-86 323.9 249 63.9
MELO3C021859.2 Cucumis melo HOM05D004457 ORTHO05D005282 1.5e-86 323.6 250 65.2
Phvul.002G041000 Phaseolus vulgaris HOM05D004457 ORTHO05D005282 1.5e-86 323.6 250 61.6
TPR.G37899 Trifolium pratense HOM05D004457 ORTHO05D005282 7.5e-86 321.2 252 61.9
CsaV3_2G036630 Cucumis sativus L. HOM05D004457 ORTHO05D005282 1.3e-85 320.5 250 64.8
AUR62028201 Chenopodium quinoa HOM05D004457 ORTHO05D005282 2.9e-85 319.3 250 62.0
PSO063G5530 Papaver somniferum HOM05D004457 ORTHO05D005282 3.7e-85 318.9 249 62.7
Sabra13G0073500 Salix brachista HOM05D004457 ORTHO05D005282 6.4e-85 318.2 220 70.5
Ca_24434_v3 Cicer arietinum L. HOM05D004457 ORTHO05D005282 8.3e-85 317.8 250 61.6
AT1G65020 Arabidopsis thaliana HOM05D004457 ORTHO05D005282 1.1e-84 317.4 249 64.7
VMungo1215G3184 Vigna mungo HOM05D004457 ORTHO05D005282 1.1e-84 317.4 250 61.2
Carub.0002s1019 Capsella rubella HOM05D004457 ORTHO05D005282 1.4e-84 317.0 249 64.3
CsaV3_3G050090 Cucumis sativus L. HOM05D004457 ORTHO05D005282 3.2e-84 315.8 249 62.2
AL2G19640 Arabidopsis lyrata HOM05D004457 ORTHO05D005282 4.1e-84 315.5 249 64.3
MSTRG.26922 Avicennia marina HOM05D004457 ORTHO05D005282 4.1e-84 315.5 251 61.0
PSO782G5560 Papaver somniferum HOM05D004457 ORTHO05D005282 2.1e-83 313.2 249 61.8
Sp5g19410 Schrenkiella parvula HOM05D004457 ORTHO05D005282 3.5e-83 312.4 249 62.2
Medtr5g007360 Medicago truncatula HOM05D004457 ORTHO05D005282 3.9e-82 308.9 250 59.2
Thhalv10022467m.g Eutrema salsugineum HOM05D004457 ORTHO05D005282 1.5e-81 307.0 249 62.7
Psat2g189240 Pisum sativum HOM05D004457 ORTHO05D005282 3.3e-81 305.8 250 59.2
BolC2t08250H Brassica oleracea HOM05D004457 ORTHO05D005282 4.3e-81 305.4 246 61.0
BraA07t30901Z Brassica rapa HOM05D004457 ORTHO05D005282 7.3e-81 304.7 249 61.8
LjContig00222g0016666 Lotus japonicus HOM05D004457 ORTHO05D005282 7.3e-81 304.7 251 61.8
BraA02t06354Z Brassica rapa HOM05D004457 ORTHO05D005282 1.2e-80 303.9 246 61.4
CiPaw.06G035000 Carya illinoinensis HOM05D004457 ORTHO05D005282 2.8e-80 302.8 253 63.2
C06p38960 Brassica napus HOM05D004457 ORTHO05D005282 4.0e-79 298.9 250 61.2
BolC6t38988H Brassica oleracea HOM05D004457 ORTHO05D005282 4.0e-79 298.9 250 61.2
SalBow2G1767 Salvia bowleyana HOM05D004457 ORTHO05D005282 8.9e-79 297.7 249 58.6
BcaB05g25319 Brassica carinata HOM05D004457 ORTHO05D005282 1.2e-78 297.4 249 58.6
SalBow4G0372 Salvia bowleyana HOM05D004457 ORTHO05D005282 5.8e-78 295.0 251 60.6
MSTRG.8 Avicennia marina HOM05D004457 ORTHO05D005282 7.6e-78 294.7 251 57.8
Oeu015511.1 Olea europaea HOM05D004457 ORTHO05D005282 3.7e-77 292.4 249 61.0
SalBow4G0893 Salvia bowleyana HOM05D004457 ORTHO05D005282 3.7e-77 292.4 251 59.8
Migut.F00082 Erythranthe guttata HOM05D004457 ORTHO05D005282 6.4e-77 291.6 251 58.6
Sc13g0010930 Simmondsia chinensis HOM05D004457 ORTHO05D005282 8.4e-77 291.2 233 61.8
A02p12980 Brassica napus HOM05D004457 ORTHO05D005282 2.4e-76 289.7 272 55.5
unitig_90.g27538 Utricularia gibba HOM05D004457 ORTHO05D005282 2.4e-76 289.7 251 59.4
C02p21100 Brassica napus HOM05D004457 ORTHO05D005282 1.2e-75 287.3 272 54.8
SGA_v2.0_scaffold44G16903 Striga asiatica HOM05D004457 ORTHO05D005282 1.2e-75 287.3 254 58.3
PSO541G4777 Papaver somniferum HOM05D004457 ORTHO05D005282 2.7e-75 286.2 253 58.1
SGA_v2.0_scaffold50G18449 Striga asiatica HOM05D004457 ORTHO05D005282 1.0e-74 284.3 287 52.6
PSO675G5198 Papaver somniferum HOM05D004457 ORTHO05D005282 3.0e-74 282.7 255 56.5
FAN28G1138 Fragaria x ananassa HOM05D004457 ORTHO05D005282 8.6e-74 281.2 250 60.0
Peaxi162Scf00133g00612 Petunia axillaris HOM05D004457 ORTHO05D005282 8.6e-74 281.2 250 59.2
Sed0022448 Sechium edule HOM05D004457 ORTHO05D005282 1.2e-72 277.3 211 65.9
A07p32750 Brassica napus HOM05D004457 ORTHO05D005282 3.6e-72 275.8 294 51.0
ATR0665G122 Amborella trichopoda HOM05D004457 ORTHO05D005282 6.8e-71 271.6 249 52.2
CARHR056470 Cardamine hirsuta HOM05D004457 ORTHO05D005282 1.2e-70 270.8 213 65.7
Zm00001eb024890 Zea mays HOM05D004457 ORTHO05D005282 1.5e-70 270.4 251 53.8
HPP92_001524 Vanilla planifolia HOM05D004457 ORTHO05D005282 7.6e-70 268.1 250 54.4
FAN03G1923 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.3e-66 257.3 171 73.7
CDE02G1044 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 1.5e-65 253.8 248 51.2
Nitab4.5_0004268g0020 Nicotiana tabacum HOM05D004457 ORTHO05D005282 3.6e-64 249.2 195 63.1
Actinidia28413 Actinidia chinensis HOM05D004457 ORTHO05D005282 4.8e-64 248.8 158 72.2
FAN01G1413 Fragaria x ananassa HOM05D004457 ORTHO05D005282 2.0e-62 243.4 230 57.0
Duzib106G1483 Durio zibethinus HOM05D004457 ORTHO05D005282 3.4e-62 242.7 249 53.8
Dinv29138 Davidia involucrata HOM05D004457 ORTHO05D005282 3.2e-60 236.1 145 82.1
ClCG09G013130 Citrullus lanatus HOM05D004457 ORTHO05D005282 3.0e-58 229.6 172 63.4
Cfa016062 Carpinus fangiana HOM05D004457 ORTHO05D005282 8.7e-58 228.0 257 51.0
Cfa016063 Carpinus fangiana HOM05D004457 ORTHO05D005282 1.5e-57 227.3 249 51.0
ECA233G5338 Erigeron canadensis HOM05D004457 ORTHO05D005282 4.3e-57 225.7 165 67.9
QL09p022526 Quercus lobata HOM05D004457 ORTHO05D005282 9.6e-57 224.6 147 72.1
SEGI_39651 Sequoiadendron giganteum HOM05D004457 ORTHO05D005282 4.5e-54 215.7 250 44.4
AUR62002084 Chenopodium quinoa HOM05D004457 ORTHO05D005282 3.2e-52 209.5 250 48.0
Sopen03g027920 Solanum pennellii HOM05D004457 ORTHO05D005282 3.9e-50 202.6 145 68.3
Nitab4.5_0000338g0060 Nicotiana tabacum HOM05D004457 ORTHO05D005282 1.1e-49 201.1 164 62.2
Haze_00386 Corylus avellana HOM05D004457 ORTHO05D005282 2.8e-48 196.4 214 51.9
FAN25G0067 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.5e-46 190.7 250 47.6
Hund09804 Selenicereus undatus HOM05D004457 ORTHO05D005282 1.7e-45 187.2 233 45.5
DCAR_020421 Daucus carota HOM05D004457 ORTHO05D005282 1.8e-31 140.6 84 79.8
Mapoly0043s0014 Marchantia polymorpha HOM05D004457 ORTHO05D005282 1.2e-30 137.9 269 34.2
Pp3c11_5580 Physcomitrium patens HOM05D004457 ORTHO05D005282 3.4e-30 136.3 266 35.0
AagrBONN_evm.TU.Sc2ySwM_228.2639 Anthoceros agrestis HOM05D004457 ORTHO05D005282 2.7e-27 126.7 181 36.5
Nitab4.5_0000845g0010 Nicotiana tabacum HOM05D004457 ORTHO05D005282 6.9e-23 112.1 120 51.7
Gohir.A08G097750 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.2e-22 111.3 182 38.5
Pp3c10_23490 Physcomitrium patens HOM05D004457 ORTHO05D005282 2.0e-22 110.5 266 27.4
SMO364G0318 Selaginella moellendorffii HOM05D004457 ORTHO05D005282 1.0e-21 108.2 185 31.9
BolC4t27312H Brassica oleracea HOM05D004457 ORTHO05D005282 5.5e-20 102.4 88 55.7
Migut.F00937 Erythranthe guttata HOM05D004457 ORTHO05D005282 3.6e-19 99.8 75 64.0
Medtr3g091660 Medicago truncatula HOM05D004457 ORTHO05D005282 1.4e-18 97.8 76 55.3
Gohir.A08G102425 Gossypium hirsutum HOM05D004457 ORTHO05D005282 6.7e-18 95.5 66 66.7
ClCG09G013110 Citrullus lanatus HOM05D004457 ORTHO05D005282 8.8e-18 95.1 77 58.4
MELO3C003309.2 Cucumis melo HOM05D004457 ORTHO05D005282 1.5e-17 94.4 86 59.3
Dinv29137 Davidia involucrata HOM05D004457 ORTHO05D005282 5.3e-15 85.9 53 75.5
QL09p022513 Quercus lobata HOM05D004457 ORTHO05D005282 5.9e-14 82.4 58 69.0
arahy.Tifrunner.gnm1.ann1.383HND Arachis hypogaea HOM05D004457 ORTHO05D005282 2.5e-12 77.0 61 65.6
Medtr3g091670 Medicago truncatula HOM05D004457 ORTHO05D005282 9.7e-09 65.1 61 59.0
QL03p072618 Quercus lobata HOM05D000132 ORTHO05D000058 9.7e-09 65.1 62 56.5
Sopen03g027940 Solanum pennellii HOM05D004457 ORTHO05D005282 1.6e-06 57.8 46 58.7
ECA233G2641 Erigeron canadensis HOM05D004457 ORTHO05D005282 2.0e-06 57.4 40 67.5


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