Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 1.3e-205 719.5 372 100.0
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 3.6e-155 552.0 376 76.1
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 1.1e-153 547.0 374 75.7
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 1.5e-150 536.6 390 72.8
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 7.7e-150 534.3 369 75.9
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 2.3e-146 522.7 324 79.9
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 6.7e-146 521.2 362 72.4
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 2.6e-145 519.2 327 78.0
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 3.7e-144 515.4 320 79.4
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 3.7e-144 515.4 327 78.0
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 6.5e-141 504.6 412 66.3
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 2.5e-140 502.7 364 72.3
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 3.2e-140 502.3 362 68.5
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 1.2e-139 500.4 320 78.4
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 2.3e-138 496.1 320 76.6
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 3.9e-138 495.4 320 75.9
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 5.2e-138 495.0 362 68.8
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 6.7e-138 494.6 320 75.9
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 2.6e-137 492.7 326 75.2
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 1.3e-136 490.3 321 75.1
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 2.2e-136 489.6 321 74.8
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 2.2e-136 489.6 321 75.7
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 2.8e-136 489.2 320 73.8
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 3.7e-136 488.8 319 76.2
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 3.7e-136 488.8 320 75.3
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 4.8e-136 488.4 321 76.0
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 8.2e-136 487.6 320 76.9
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 8.2e-136 487.6 320 76.9
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 1.4e-135 486.9 320 75.0
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 1.8e-135 486.5 320 76.2
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 1.8e-135 486.5 321 73.2
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 2.4e-135 486.1 387 64.9
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 2.4e-135 486.1 333 73.0
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 3.1e-135 485.7 322 76.4
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 4.1e-135 485.3 321 73.2
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 7.0e-135 484.6 321 73.5
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 9.1e-135 484.2 364 70.3
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 3.5e-134 482.3 321 75.1
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 5.9e-134 481.5 322 72.7
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 6.5e-133 478.0 329 71.1
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 1.5e-132 476.9 317 75.4
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 9.4e-132 474.2 330 71.5
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 1.6e-131 473.4 319 72.4
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 1.6e-131 473.4 327 70.9
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 2.3e-130 469.5 321 72.3
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 1.2e-129 467.2 317 70.0
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 2.0e-129 466.5 333 70.3
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 2.6e-129 466.1 331 69.8
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 5.7e-129 464.9 317 71.0
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 9.7e-129 464.2 321 71.0
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 3.7e-128 462.2 330 70.3
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 3.1e-127 459.1 301 76.7
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 5.3e-127 458.4 330 69.7
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 1.6e-126 456.8 320 72.8
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 2.0e-126 456.4 320 73.8
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 2.7e-126 456.1 320 73.8
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 2.7e-126 456.1 367 65.7
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 4.5e-126 455.3 320 73.1
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 5.9e-126 454.9 327 70.0
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 1.0e-125 454.1 388 63.7
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 3.8e-125 452.2 318 69.2
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 3.2e-124 449.1 329 67.2
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 3.2e-124 449.1 320 72.2
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 7.2e-124 448.0 320 71.9
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 7.2e-124 448.0 320 71.9
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 2.7e-123 446.0 319 68.3
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 4.7e-123 445.3 311 70.7
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 1.4e-122 443.7 311 70.4
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 5.2e-122 441.8 327 67.6
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 8.8e-122 441.0 321 68.5
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 4.4e-121 438.7 311 69.8
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 1.7e-120 436.8 290 73.8
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 2.2e-120 436.4 301 70.8
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 2.8e-120 436.0 327 67.6
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 2.7e-118 429.5 320 70.6
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 1.7e-117 426.8 314 70.1
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 8.5e-117 424.5 304 72.0
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 1.5e-116 423.7 326 68.7
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 1.9e-116 423.3 316 68.0
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 1.4e-114 417.2 327 65.4
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 1.8e-114 416.8 328 63.4
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 5.2e-114 415.2 321 66.4
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 6.8e-114 414.8 332 63.6
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 3.4e-113 412.5 348 64.1
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 8.3e-112 407.9 328 61.9
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 2.3e-109 399.8 320 62.5
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 3.2e-103 379.4 321 61.1
CARHR196350 Cardamine hirsuta HOM05D007064 ORTHO05D008772 7.0e-103 378.3 275 69.8
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 9.2e-103 377.9 338 58.3
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 5.0e-101 372.1 227 81.5
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 4.1e-95 352.4 227 74.4
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 1.6e-94 350.5 241 69.7
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 2.9e-88 329.7 366 53.0
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 1.9e-87 327.0 215 74.9
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 2.5e-84 316.6 229 72.9
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 8.1e-83 311.6 353 47.3
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 6.6e-77 292.0 345 46.1
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 3.6e-75 286.2 270 56.3
AagrBONN_evm.TU.Sc2ySwM_344.2887 Anthoceros agrestis HOM05D007064 ORTHO05D008772 1.1e-71 274.6 298 49.3
Cpa.g.sc43.97 Carica papaya HOM05D007064 ORTHO05D008772 3.4e-49 199.9 131 73.3
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 3.4e-41 173.3 304 37.5
CBR_g8900 Chara braunii HOM05D007064 ORTHO05D000002 7.9e-38 162.2 208 44.7
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 5.1e-29 132.9 83 80.7
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 8.8e-21 105.5 87 58.6
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 7.0e-18 95.9 85 55.3
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 8.0e-14 82.4 52 75.0
PRCOL_00004348 Prasinoderma coloniale HOM05D007064 ORTHO05D008772 2.8e-11 73.9 224 28.1


User provided reference genes

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