Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 0.0e+00 1279.2 640 100.0
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 8.3e-245 850.5 669 68.3
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 1.7e-234 816.2 690 64.3
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 3.9e-234 815.1 742 61.3
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 2.3e-231 805.8 668 64.8
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 1.5e-230 803.1 676 64.5
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 4.4e-230 801.6 668 65.4
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 1.2e-224 783.5 668 63.5
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 3.6e-224 781.9 671 63.2
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 1.4e-223 780.0 663 61.8
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 4.0e-223 778.5 656 63.6
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 1.6e-219 766.5 666 62.8
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 8.7e-218 760.8 662 62.2
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 1.5e-217 760.0 662 60.9
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 2.5e-217 759.2 668 62.3
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 5.6e-217 758.1 667 62.4
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 4.8e-216 755.0 643 62.2
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 9.0e-215 750.7 668 61.4
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 3.8e-213 745.3 670 61.0
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 2.4e-212 742.7 637 63.9
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 4.2e-212 741.9 678 59.6
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 7.8e-211 737.6 665 61.4
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 1.1e-209 733.8 715 58.7
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 1.9e-209 733.0 665 60.3
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 1.9e-209 733.0 665 60.5
CSS0041625 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.6e-208 729.9 531 71.6
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 2.8e-208 729.2 658 59.7
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 2.4e-207 726.1 660 61.4
CSS0024367 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 2.0e-206 723.0 531 71.0
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 4.6e-203 711.8 770 54.0
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 4.6e-203 711.8 664 59.3
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 1.5e-201 706.8 665 57.7
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 2.5e-201 706.1 654 60.1
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 5.6e-201 704.9 663 58.2
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 3.7e-200 702.2 706 56.7
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 8.1e-200 701.0 674 58.3
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 5.8e-198 694.9 671 58.6
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 7.6e-198 694.5 657 56.8
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 7.6e-198 694.5 618 61.3
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 1.0e-197 694.1 616 61.0
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 2.5e-196 689.5 640 59.1
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 3.2e-196 689.1 657 56.9
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 1.6e-195 686.8 703 53.6
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 2.7e-195 686.0 669 56.2
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 1.9e-193 679.9 545 68.1
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 4.5e-190 668.7 634 57.9
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.8e-184 649.4 656 57.3
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 3.8e-181 639.0 681 54.9
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 6.5e-181 638.3 680 55.0
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 9.4e-180 634.4 664 55.6
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 9.4e-180 634.4 687 53.6
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 5.1e-178 628.6 682 54.5
arahy.Tifrunner.gnm1.ann1.M1FPNI Arachis hypogaea HOM05D005766 ORTHO05D007002 4.8e-176 622.1 648 54.0
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 2.4e-175 619.8 554 60.1
Ciclev10004767m.g Citrus clementina HOM05D005766 ORTHO05D007002 2.6e-174 616.3 511 65.0
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 2.2e-173 613.2 564 58.7
SGA_v2.0_scaffold192G40599 Striga asiatica HOM05D005766 ORTHO05D007002 6.7e-170 601.7 518 62.2
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 3.7e-168 595.9 707 51.3
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 2.6e-153 546.6 664 50.3
Sabra15G0021700 Salix brachista HOM05D005766 ORTHO05D007002 1.2e-150 537.7 548 55.7
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 3.8e-149 532.7 661 45.1
FAN06G1885 Fragaria x ananassa HOM05D005766 ORTHO05D007002 7.2e-148 528.5 473 61.1
FAN01G0765 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.2e-145 521.2 473 60.7
RcHm_v2.0_Chr1g0379661 Rosa chinensis HOM05D005766 ORTHO05D007002 2.3e-141 506.9 483 60.0
Oeu003335.2 Olea europaea HOM05D005766 ORTHO05D007002 1.3e-136 491.1 463 58.7
SEGI_39054 Sequoiadendron giganteum HOM05D005766 ORTHO05D007002 8.3e-136 488.4 459 57.5
QL11p056564 Quercus lobata HOM05D005766 ORTHO05D007002 4.1e-135 486.1 401 64.6
Sopen12g011340 Solanum pennellii HOM05D005766 ORTHO05D007002 1.2e-134 484.6 465 59.6
Lalb_Chr06g0161411 Lupinus albus HOM05D005766 ORTHO05D007002 8.6e-133 478.4 485 56.5
Peaxi162Scf00023g00720 Petunia axillaris HOM05D005766 ORTHO05D007002 7.3e-132 475.3 535 52.9
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 1.0e-130 471.5 337 73.3
Atru.chr1.315 Acer truncatum HOM05D005766 ORTHO05D007002 2.7e-126 456.8 434 57.8
HPP92_022503 Vanilla planifolia HOM05D005766 ORTHO05D007002 7.8e-126 455.3 475 55.6
Medtr1g099380 Medicago truncatula HOM05D005766 ORTHO05D007002 7.3e-124 448.7 462 56.5
Psat6g194920 Pisum sativum HOM05D005766 ORTHO05D007002 8.3e-120 435.3 412 58.7
EL10Ac3g05375 Beta vulgaris HOM05D005766 ORTHO05D007002 1.1e-119 434.9 465 55.3
Sc13g0009380 Simmondsia chinensis HOM05D005766 ORTHO05D007002 1.2e-118 431.4 487 53.2
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 6.6e-117 425.6 661 39.8
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 2.9e-104 383.6 633 36.8
CDE02G1402 Ceratophyllum demersum HOM05D001977 ORTHO05D002246 2.7e-102 377.1 281 67.6
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 1.1e-98 365.2 659 37.5
QL09p011984 Quercus lobata HOM05D005766 ORTHO05D007002 8.1e-83 312.4 287 61.7
Actinidia08607 Actinidia chinensis HOM05D005766 ORTHO05D007002 1.6e-78 298.1 152 93.4
Nitab4.5_0000157g0190 Nicotiana tabacum HOM05D005766 ORTHO05D007002 2.7e-78 297.4 274 62.0
Glyma.09G181880 Glycine max HOM05D005766 ORTHO05D007002 2.3e-77 294.3 238 63.0
Atru.chr1.316 Acer truncatum HOM05D005766 ORTHO05D007002 1.3e-75 288.5 174 79.9
QL11p056568 Quercus lobata HOM05D005766 ORTHO05D007002 2.8e-75 287.3 181 76.8
RcHm_v2.0_Chr1g0379651 Rosa chinensis HOM05D005766 ORTHO05D007002 9.0e-74 282.3 182 74.2
Nitab4.5_0014657g0010 Nicotiana tabacum HOM05D005766 ORTHO05D007002 1.2e-73 282.0 257 58.8
Sc13g0009390 Simmondsia chinensis HOM05D005766 ORTHO05D007002 2.1e-70 271.2 175 72.0
HanXRQChr14g0440221 Helianthus annuus HOM05D005766 ORTHO05D007002 1.8e-69 268.1 173 70.5
Nitab4.5_0001504g0110 Nicotiana tabacum HOM05D005766 ORTHO05D007002 4.3e-68 263.5 189 68.8
Solyc12g021310.3 Solanum lycopersicum HOM05D005766 ORTHO05D007002 7.4e-68 262.7 183 68.3
PGSC0003DMG400006615 Solanum tuberosum HOM05D005766 ORTHO05D007002 1.3e-67 261.9 173 71.1
Zm00001eb221900 Zea mays HOM05D005766 ORTHO05D007002 1.6e-67 261.5 345 47.8
Sopen12g011330 Solanum pennellii HOM05D005766 ORTHO05D007002 3.7e-67 260.4 173 69.4
Psat6g194960 Pisum sativum HOM05D000038 ORTHO05D007763 5.9e-65 253.1 175 70.9
CBR_g23333 Chara braunii HOM05D005766 ORTHO05D007002 2.1e-62 244.6 358 41.9
Lalb_Chr06g0161401 Lupinus albus HOM05D005766 ORTHO05D007002 1.4e-61 241.9 178 64.0
Actinidia08606 Actinidia chinensis HOM05D005766 ORTHO05D007002 1.1e-60 238.8 257 52.1
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 2.4e-58 231.1 583 32.1
Medtr1g099390 Medicago truncatula HOM05D005766 ORTHO05D007002 2.9e-56 224.2 177 61.6
Glyma.03G072901 Glycine max HOM05D005766 ORTHO05D007002 1.7e-51 208.4 115 81.7
QL09p011987 Quercus lobata HOM05D005766 ORTHO05D007002 1.7e-51 208.4 178 59.6
AUR62021076 Chenopodium quinoa HOM05D005766 ORTHO05D007002 4.5e-49 200.3 132 72.0
AUR62031455 Chenopodium quinoa HOM05D000038 ORTHO05D007763 8.5e-48 196.1 135 68.9
CAN.G71.5 Capsicum annuum HOM05D005766 ORTHO05D007002 5.5e-47 193.4 137 70.8
Glyma.18G131400 Glycine max HOM05D005766 ORTHO05D007002 9.4e-47 192.6 174 55.7
Os05g0299300 Oryza sativa ssp. japonica HOM05D005766 ORTHO05D007002 2.0e-41 174.9 130 63.1
Nitab4.5_0000327g0060 Nicotiana tabacum HOM05D005766 ORTHO05D007002 7.2e-39 166.4 90 86.7
Duzib084G0599 Durio zibethinus HOM05D005766 ORTHO05D007002 3.7e-35 154.1 114 72.8
arahy.Tifrunner.gnm1.ann1.DV56VC Arachis hypogaea HOM05D005766 ORTHO05D007002 1.3e-32 145.6 136 51.5
PRCOL_00006853 Prasinoderma coloniale HOM05D005766 ORTHO05D007002 1.1e-31 142.5 696 23.6
TWI39G0059 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 3.2e-31 141.0 168 49.4
Actinidia08608 Actinidia chinensis HOM05D005766 ORTHO05D007002 1.4e-26 125.6 122 54.9
COL.COLO4_30253 Corchorus olitorius HOM05D005766 ORTHO05D007002 3.5e-25 120.9 200 44.5
Cre01.g002700 Chlamydomonas reinhardtii HOM05D005766 ORTHO05D007002 5.9e-25 120.2 168 37.5
QL09p011981 Quercus lobata HOM05D005766 ORTHO05D007002 2.8e-22 111.3 79 70.9
arahy.Tifrunner.gnm1.ann1.XWQU4Z Arachis hypogaea HOM05D005766 ORTHO05D007002 7.5e-20 103.2 83 59.0
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.7e-19 102.1 82 65.9
CSS0002634 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 9.2e-18 96.3 65 73.8
Cfa000854 Carpinus fangiana HOM05D005766 ORTHO05D007002 9.2e-18 96.3 69 69.6
TPR.G27363 Trifolium pratense HOM05D005766 ORTHO05D007002 1.5e-15 89.0 57 68.4
Glyma.12G172150 Glycine max HOM05D005766 ORTHO05D007002 2.5e-15 88.2 125 44.0
arahy.Tifrunner.gnm1.ann1.118EZC Arachis hypogaea HOM05D005766 ORTHO05D007002 5.6e-15 87.0 60 68.3
Glyma.10G228301 Glycine max HOM05D005766 ORTHO05D007002 2.8e-14 84.7 43 83.7
Glyma.16G148650 Glycine max HOM05D005766 ORTHO05D007002 2.8e-14 84.7 43 83.7
Oeu049881.1 Olea europaea HOM05D005766 ORTHO05D007002 9.2e-10 69.7 57 59.6
Glyma.08G028700 Glycine max HOM05D005766 ORTHO05D007002 2.7e-09 68.2 43 72.1
arahy.Tifrunner.gnm1.ann1.AW6XP7 Arachis hypogaea HOM05D005766 ORTHO05D007002 1.7e-08 65.5 50 48.0
RcHm_v2.0_Chr4g0404071 Rosa chinensis HOM05D005766 ORTHO05D007002 2.3e-08 65.1 34 91.2
Oeu044897.1 Olea europaea HOM05D005766 ORTHO05D007002 1.1e-07 62.8 87 41.4
arahy.Tifrunner.gnm1.ann1.DC2VU6 Arachis hypogaea HOM05D000702 ORTHO05D007002 1.5e-07 62.4 129 36.4
Oeu016993.1 Olea europaea HOM05D005766 ORTHO05D007002 1.5e-07 62.4 87 41.4
Oeu023563.1 Olea europaea HOM05D005766 ORTHO05D007002 2.5e-07 61.6 87 41.4
arahy.Tifrunner.gnm1.ann1.3HS4ZY Arachis hypogaea HOM05D005766 ORTHO05D007002 9.5e-07 59.7 40 72.5
CSS0009653 Camellia sinensis var. sinensis HOM05D004669 ORTHO05D005767 6.2e-06 57.0 228 26.8
PRCOL_00007011 Prasinoderma coloniale HOM05D004669 ORTHO05D000387 6.2e-06 57.0 183 24.6
PSO675G6139 Papaver somniferum HOM05D004669 ORTHO05D005767 8.1e-06 56.6 227 25.1


User provided reference genes

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